RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 PRKCIP41743 596 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 KNOP1Q1ED39 458 aaKnown RBP14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 TBC1D1Q86TI0 1168 aaPredicted RBP14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 PNMA8AQ86V59 439 aaPredicted RBP14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 GLYCTKQ8IVS8 523 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 NLGN1Q8N2Q7 840 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 FBXO25Q8TCJ0 367 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 PRMT1Q99873 361 aaKnown RBP14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 ELAC2Q9BQ52 826 aaKnown RBP14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 IDI2Q9BXS1 227 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 AZI2Q9H6S1 392 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 ARFGEF1Q9Y6D6 1849 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 DDX3YO15523 660 aaKnown RBP14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 GHRP10912 638 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 SLCO1A2P46721 670 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 IFNAR2P48551 515 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 CLNS1AP54105 237 aaKnown RBP14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 JAM2P57087 298 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 SLC29A2Q14542 456 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 COG2Q14746 738 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 EPM2AIP1Q7L775 607 aaPredicted RBP14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 CCDC50Q8IVM0 306 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 SLC35G2Q8TBE7 412 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 EIF2AK1Q9BQI3 630 aaKnown RBP14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 WDR18Q9BV38 432 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 CNOT10Q9H9A5 744 aaKnown RBP14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 ABCF3Q9NUQ8 709 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 SLC12A4Q9UP95 1085 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 PCDHB13Q9Y5F0 798 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 BZW2Q9Y6E2 419 aaKnown RBP14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 LRRC37AA6NMS7 1700 aa14.4□□□□□ -0.1
PDZRN3-208ENST00000479530 XRCC5P13010 732 aaKnown RBP14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 NMT1P30419 496 aaKnown RBP14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 SREBF1P36956 1147 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 MMP13P45452 471 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 DR1Q01658 176 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 EDRF1Q3B7T1 1238 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 DUPD1Q68J44 220 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 ZDHHC24Q6UX98 284 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 PIGWQ7Z7B1 504 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 SLFN12Q8IYM2 578 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 ATP6V0A4Q9HBG4 840 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 GCNT4Q9P109 453 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 PRR12Q9ULL5 1215 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 SCAF8Q9UPN6 1271 aaKnown RBP14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 BCS1LQ9Y276 419 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 CLRN2A0PK11 232 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 SKAP2O75563 359 aaPredicted RBP14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 BMP3P12645 472 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 PMS2P54278 862 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 PTENP60484 403 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 ZYXQ15942 572 aaKnown RBP14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 Q4G0T1 1027 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 STRIP1Q5VSL9 837 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 CCDC174Q6PII3 467 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 TMEM179Q6ZVK1 233 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 ALG3Q92685 438 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 ARHGEF26Q96DR7 871 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 FAXDC2Q96IV6 333 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 ERP44Q9BS26 406 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 SEMA4AQ9H3S1 761 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 TMOD4Q9NZQ9 345 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 WRAP73Q9P2S5 460 aaPredicted RBP14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 AMFRQ9UKV5 643 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 ASTN1O14525 1302 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 RPTORQ8N122 1335 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 TCP10L2B9ZVM9 353 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 GCNT3O95395 438 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 CFBP00751 764 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 NBPF9Q3BBW0 867 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 CCDC38Q502W7 563 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 PALB2Q86YC2 1186 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 TPH2Q8IWU9 490 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 EPS8L3Q8TE67 593 aaKnown RBP14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 SLC35C1Q96A29 364 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 AKT1S1Q96B36 256 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 CENPTQ96BT3 561 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 THOC1Q96FV9 657 aaKnown RBP14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 PABPC3Q9H361 631 aaKnown RBP14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 TAS2R14Q9NYV8 317 aa14.39□□□□□ -0.11
PDZRN3-208ENST00000479530 SIPA1L1O43166 1804 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 SCN9AQ15858 1988 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 TGFB1I1O43294 461 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 EVI5O60447 810 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 SLC8A1P32418 973 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 PDE6BP35913 854 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 ZNF76P36508 570 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 KCNJ2P63252 427 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 MYO1EQ12965 1108 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 AP3B2Q13367 1082 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 FRMD5Q7Z6J6 570 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 CCDC63Q8NA47 563 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 C18orf8Q96DM3 657 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 CSRNP1Q96S65 589 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 CD2APQ9Y5K6 639 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 IGLV3-22A0A075B6J6 115 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 CCDC189A1A4V9 331 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 YDJCA8MPS7 323 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 NUDT17P0C025 328 aa14.38□□□□□ -0.11
PDZRN3-208ENST00000479530 EIF3BP55884 814 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms