RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 MAN1C1Q9NR34 630 aa18.13■□□□□ 0.49
DDX56-210ENST00000479440 MRPL17Q9NRX2 175 aaKnown RBP18.13■□□□□ 0.49
DDX56-210ENST00000479440 DNAJB4Q9UDY4 337 aa18.13■□□□□ 0.49
DDX56-210ENST00000479440 MYO10Q9HD67 2058 aa18.13■□□□□ 0.49
DDX56-210ENST00000479440 MED19A0JLT2 244 aaPredicted RBP18.12■□□□□ 0.49
DDX56-210ENST00000479440 CSDE1O75534 798 aaKnown RBP18.12■□□□□ 0.49
DDX56-210ENST00000479440 SSBP05455 408 aaKnown RBP eCLIP18.12■□□□□ 0.49
DDX56-210ENST00000479440 URODP06132 367 aa18.12■□□□□ 0.49
DDX56-210ENST00000479440 CIITAP33076 1130 aa18.12■□□□□ 0.49
DDX56-210ENST00000479440 DNM2P50570 870 aa18.12■□□□□ 0.49
DDX56-210ENST00000479440 PUM1Q14671 1186 aaKnown RBP eCLIP18.12■□□□□ 0.49
DDX56-210ENST00000479440 LONRF3Q496Y0 759 aa18.12■□□□□ 0.49
DDX56-210ENST00000479440 RNF20Q5VTR2 975 aa18.12■□□□□ 0.49
DDX56-210ENST00000479440 KIAA2013Q8IYS2 634 aa18.12■□□□□ 0.49
DDX56-210ENST00000479440 FEZF2Q8TBJ5 459 aa18.12■□□□□ 0.49
DDX56-210ENST00000479440 NXPE3Q969Y0 559 aa18.12■□□□□ 0.49
DDX56-210ENST00000479440 VN1R3Q9BXE9 311 aa18.12■□□□□ 0.49
DDX56-210ENST00000479440 RHOBTB2Q9BYZ6 727 aa18.12■□□□□ 0.49
DDX56-210ENST00000479440 ZMYND12Q9H0C1 365 aa18.12■□□□□ 0.49
DDX56-210ENST00000479440 TBC1D17Q9HA65 648 aa18.12■□□□□ 0.49
DDX56-210ENST00000479440 SEPT9Q9UHD8 586 aaPredicted RBP18.12■□□□□ 0.49
DDX56-210ENST00000479440 SSX2IPQ9Y2D8 614 aa18.12■□□□□ 0.49
DDX56-210ENST00000479440 R4GN57 208 aa18.12■□□□□ 0.49
DDX56-210ENST00000479440 CLUHO75153 1309 aa18.12■□□□□ 0.49
DDX56-210ENST00000479440 RIF1Q5UIP0 2472 aaKnown RBP18.11■□□□□ 0.49
DDX56-210ENST00000479440 A0A087WZ62 844 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 KRBA1A5PL33 1030 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 CHMP2AO43633 222 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 GAS7O60861 476 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 OFD1O75665 1012 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 ADH1AP07327 375 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 CNPP09543 421 aaKnown RBP18.11■□□□□ 0.49
DDX56-210ENST00000479440 SRFP11831 508 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 GNA11P29992 359 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 RCAN1P53805 252 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 NECTIN1Q15223 517 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 UGCGQ16739 394 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 RIN2Q8WYP3 895 aaPredicted RBP18.11■□□□□ 0.49
DDX56-210ENST00000479440 FAM193BQ96PV7 902 aaPredicted RBP18.11■□□□□ 0.49
DDX56-210ENST00000479440 FDXACB1Q9BRP7 624 aaPredicted RBP18.11■□□□□ 0.49
DDX56-210ENST00000479440 TMEM175Q9BSA9 504 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 TEKT3Q9BXF9 490 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 WDR6Q9NNW5 1121 aaKnown RBP18.11■□□□□ 0.49
DDX56-210ENST00000479440 ANO2Q9NQ90 1003 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 EPS15L1Q9UBC2 864 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 CA14Q9ULX7 337 aa18.11■□□□□ 0.49
DDX56-210ENST00000479440 C2orf16Q68DN1 1984 aa18.1■□□□□ 0.49
DDX56-210ENST00000479440 CNTNAP2Q9UHC6 1331 aa18.1■□□□□ 0.49
DDX56-210ENST00000479440 KLF18A0A0U1RQI7 1052 aa18.1■□□□□ 0.49
DDX56-210ENST00000479440 ZNF623O75123 536 aa18.1■□□□□ 0.49
DDX56-210ENST00000479440 DRP2Q13474 957 aa18.1■□□□□ 0.49
DDX56-210ENST00000479440 TARBP2Q15633 366 aaKnown RBP18.1■□□□□ 0.49
DDX56-210ENST00000479440 MTERF2Q49AM1 385 aa18.1■□□□□ 0.49
DDX56-210ENST00000479440 CATSPER4Q7RTX7 472 aa18.1■□□□□ 0.49
DDX56-210ENST00000479440 BICD2Q8TD16 824 aa18.1■□□□□ 0.49
DDX56-210ENST00000479440 LENG9Q96B70 501 aa18.1■□□□□ 0.49
DDX56-210ENST00000479440 RIT2Q99578 217 aa18.1■□□□□ 0.49
DDX56-210ENST00000479440 HERC2P3Q9BVR0 1158 aa18.1■□□□□ 0.49
DDX56-210ENST00000479440 BRPF3Q9ULD4 1205 aa18.1■□□□□ 0.49
DDX56-210ENST00000479440 VPS13AQ96RL7 3174 aa18.1■□□□□ 0.49
DDX56-210ENST00000479440 GVINP1Q7Z2Y8 2422 aa18.1■□□□□ 0.49
DDX56-210ENST00000479440 CCDC196A0A1B0GTZ2 297 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 CCDC195A0A1B0GUA6 201 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 MEIS3P2A8K0S8 358 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 INPPL1O15357 1258 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 GLUD1P00367 558 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 SOD2P04179 222 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 AK2P54819 239 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 XKR3Q5GH77 459 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 PHLDB3Q6NSJ2 640 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 RHPN2Q8IUC4 686 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 RDM1Q8NG50 284 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 RUBCNQ92622 972 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 NLRP4Q96MN2 994 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 ESYT1Q9BSJ8 1104 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 RSAD1Q9HA92 442 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 ARHGEF3Q9NR81 526 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 KANSL3Q9P2N6 904 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 FAN1Q9Y2M0 1017 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 CACNA1AO00555 2505 aa18.09■□□□□ 0.49
DDX56-210ENST00000479440 C2CD2LO14523 706 aa18.08■□□□□ 0.48
DDX56-210ENST00000479440 LILRB3O75022 631 aa18.08■□□□□ 0.48
DDX56-210ENST00000479440 N4BP1O75113 896 aaKnown RBP18.08■□□□□ 0.48
DDX56-210ENST00000479440 ALDH2P05091 517 aa18.08■□□□□ 0.48
DDX56-210ENST00000479440 CDC27P30260 824 aa18.08■□□□□ 0.48
DDX56-210ENST00000479440 SPECC1Q5M775 1068 aa18.08■□□□□ 0.48
DDX56-210ENST00000479440 LRCH2Q5VUJ6 765 aa18.08■□□□□ 0.48
DDX56-210ENST00000479440 ZNF280BQ86YH2 543 aa18.08■□□□□ 0.48
DDX56-210ENST00000479440 CCDC148Q8NFR7 591 aa18.08■□□□□ 0.48
DDX56-210ENST00000479440 RSAD2Q8WXG1 361 aa18.08■□□□□ 0.48
DDX56-210ENST00000479440 JPH2Q9BR39 696 aaPredicted RBP18.08■□□□□ 0.48
DDX56-210ENST00000479440 NIFKQ9BYG3 293 aaKnown RBP18.08■□□□□ 0.48
DDX56-210ENST00000479440 UNC45AQ9H3U1 944 aa18.08■□□□□ 0.48
DDX56-210ENST00000479440 AGPAT5Q9NUQ2 364 aa18.08■□□□□ 0.48
DDX56-210ENST00000479440 SUCLA2Q9P2R7 463 aaPredicted RBP18.08■□□□□ 0.48
DDX56-210ENST00000479440 NAP1L2Q9ULW6 460 aaPredicted RBP18.08■□□□□ 0.48
DDX56-210ENST00000479440 IGKV6-21A0A0C4DH24 114 aa18.07■□□□□ 0.48
DDX56-210ENST00000479440 MSH4O15457 936 aa18.07■□□□□ 0.48
DDX56-210ENST00000479440 B4GALT3O60512 393 aa18.07■□□□□ 0.48
DDX56-210ENST00000479440 DCNP07585 359 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms