RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 PRKD3O94806 890 aa7.56□□□□□ -1.2
SSR3-207ENST00000478842 LTFP02788 710 aa7.56□□□□□ -1.2
SSR3-207ENST00000478842 JUNBP17275 347 aaPredicted RBP7.56□□□□□ -1.2
SSR3-207ENST00000478842 ADCY1Q08828 1119 aa7.56□□□□□ -1.2
SSR3-207ENST00000478842 EPHA7Q15375 998 aa7.56□□□□□ -1.2
SSR3-207ENST00000478842 SEC23AQ15436 765 aa7.56□□□□□ -1.2
SSR3-207ENST00000478842 ETV3LQ6ZN32 361 aa7.56□□□□□ -1.2
SSR3-207ENST00000478842 NBPF11Q86T75 865 aa7.56□□□□□ -1.2
SSR3-207ENST00000478842 AMIGO3Q86WK7 504 aa7.56□□□□□ -1.2
SSR3-207ENST00000478842 FAM126BQ8IXS8 530 aa7.56□□□□□ -1.2
SSR3-207ENST00000478842 CLRN3Q8NCR9 226 aa7.56□□□□□ -1.2
SSR3-207ENST00000478842 COG1Q8WTW3 980 aa7.56□□□□□ -1.2
SSR3-207ENST00000478842 TOE1Q96GM8 510 aaKnown RBP7.56□□□□□ -1.2
SSR3-207ENST00000478842 AHCYL2Q96HN2 611 aaKnown RBP7.56□□□□□ -1.2
SSR3-207ENST00000478842 ASPSCR1Q9BZE9 553 aa7.56□□□□□ -1.2
SSR3-207ENST00000478842 DTLQ9NZJ0 730 aa7.56□□□□□ -1.2
SSR3-207ENST00000478842 USP36Q9P275 1121 aaKnown RBP7.56□□□□□ -1.2
SSR3-207ENST00000478842 KLHL42Q9P2K6 505 aa7.56□□□□□ -1.2
SSR3-207ENST00000478842 C4BP0C0L5 1744 aa7.55□□□□□ -1.2
SSR3-207ENST00000478842 ALDH1L1O75891 902 aa7.55□□□□□ -1.2
SSR3-207ENST00000478842 FAHP16930 419 aa7.55□□□□□ -1.2
SSR3-207ENST00000478842 GRIN1Q05586 938 aa7.55□□□□□ -1.2
SSR3-207ENST00000478842 FSTL1Q12841 308 aa7.55□□□□□ -1.2
SSR3-207ENST00000478842 ZC3H18Q86VM9 953 aaKnown RBP7.55□□□□□ -1.2
SSR3-207ENST00000478842 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.55□□□□□ -1.2
SSR3-207ENST00000478842 ALG3Q92685 438 aa7.55□□□□□ -1.2
SSR3-207ENST00000478842 E2F7Q96AV8 911 aa7.55□□□□□ -1.2
SSR3-207ENST00000478842 DDX11Q96FC9 970 aa7.55□□□□□ -1.2
SSR3-207ENST00000478842 ZNF552Q9H707 407 aaPredicted RBP7.55□□□□□ -1.2
SSR3-207ENST00000478842 NOC2LQ9Y3T9 749 aaKnown RBP7.55□□□□□ -1.2
SSR3-207ENST00000478842 CD163L1Q9NR16 1453 aa7.55□□□□□ -1.2
SSR3-207ENST00000478842 EDC4Q6P2E9 1401 aaKnown RBP7.54□□□□□ -1.2
SSR3-207ENST00000478842 RGPD2P0DJD1 1756 aa7.54□□□□□ -1.2
SSR3-207ENST00000478842 ACOT7O00154 380 aa7.54□□□□□ -1.2
SSR3-207ENST00000478842 PTX3P26022 381 aaPredicted RBP7.54□□□□□ -1.2
SSR3-207ENST00000478842 EPHB1P54762 984 aa7.54□□□□□ -1.2
SSR3-207ENST00000478842 CATSPEREQ5SY80 951 aa7.54□□□□□ -1.2
SSR3-207ENST00000478842 MPZL3Q6UWV2 235 aa7.54□□□□□ -1.2
SSR3-207ENST00000478842 FRMD7Q6ZUT3 714 aa7.54□□□□□ -1.2
SSR3-207ENST00000478842 TMC6Q7Z403 805 aa7.54□□□□□ -1.2
SSR3-207ENST00000478842 CPA5Q8WXQ8 436 aa7.54□□□□□ -1.2
SSR3-207ENST00000478842 JDP2Q8WYK2 163 aa7.54□□□□□ -1.2
SSR3-207ENST00000478842 C16orf92Q96LL3 132 aa7.54□□□□□ -1.2
SSR3-207ENST00000478842 RNF38Q9H0F5 515 aa7.54□□□□□ -1.2
SSR3-207ENST00000478842 FAM53CQ9NYF3 392 aa7.54□□□□□ -1.2
SSR3-207ENST00000478842 TRHDEQ9UKU6 1024 aa7.54□□□□□ -1.2
SSR3-207ENST00000478842 ASB1Q9Y576 335 aa7.54□□□□□ -1.2
SSR3-207ENST00000478842 TOGARAM1Q9Y4F4 1720 aa7.54□□□□□ -1.2
SSR3-207ENST00000478842 WASHC2AQ641Q2 1341 aa7.53□□□□□ -1.2
SSR3-207ENST00000478842 KIAA1551Q9HCM1 1747 aa7.53□□□□□ -1.2
SSR3-207ENST00000478842 ITGB4P16144 1822 aa7.53□□□□□ -1.2
SSR3-207ENST00000478842 FBXO21O94952 628 aa7.53□□□□□ -1.2
SSR3-207ENST00000478842 ITGB5P18084 799 aa7.53□□□□□ -1.2
SSR3-207ENST00000478842 TGFB2P61812 414 aa7.53□□□□□ -1.2
SSR3-207ENST00000478842 NKX3-2P78367 333 aa7.53□□□□□ -1.2
SSR3-207ENST00000478842 TARBP2Q15633 366 aaKnown RBP7.53□□□□□ -1.2
SSR3-207ENST00000478842 TRIM8Q9BZR9 551 aa7.53□□□□□ -1.2
SSR3-207ENST00000478842 ZMAT4Q9H898 229 aa7.53□□□□□ -1.2
SSR3-207ENST00000478842 TCEAL9Q9UHQ7 104 aa7.53□□□□□ -1.2
SSR3-207ENST00000478842 KCNG1Q9UIX4 513 aa7.53□□□□□ -1.2
SSR3-207ENST00000478842 HCFC2Q9Y5Z7 792 aa7.53□□□□□ -1.2
SSR3-207ENST00000478842 C10orf71Q711Q0 1435 aa7.52□□□□□ -1.2
SSR3-207ENST00000478842 ARFGEF1Q9Y6D6 1849 aa7.52□□□□□ -1.2
SSR3-207ENST00000478842 BRCA1P38398 1863 aaKnown RBP7.52□□□□□ -1.21
SSR3-207ENST00000478842 N4BP2Q86UW6 1770 aaPredicted RBP7.52□□□□□ -1.21
SSR3-207ENST00000478842 PALLDQ8WX93 1383 aa7.52□□□□□ -1.21
SSR3-207ENST00000478842 PAPLNO95428 1278 aa7.52□□□□□ -1.21
SSR3-207ENST00000478842 NCAM1P13591 858 aa7.52□□□□□ -1.21
SSR3-207ENST00000478842 NEK2P51955 445 aa7.52□□□□□ -1.21
SSR3-207ENST00000478842 ERVK-21P61565 698 aa7.52□□□□□ -1.21
SSR3-207ENST00000478842 DBPQ10586 325 aaPredicted RBP7.52□□□□□ -1.21
SSR3-207ENST00000478842 KLF1Q13351 362 aaPredicted RBP7.52□□□□□ -1.21
SSR3-207ENST00000478842 TTF1Q15361 905 aaPredicted RBP7.52□□□□□ -1.21
SSR3-207ENST00000478842 ESRP1Q6NXG1 681 aaKnown RBP7.52□□□□□ -1.21
SSR3-207ENST00000478842 C16orf71Q8IYS4 520 aaPredicted RBP7.52□□□□□ -1.21
SSR3-207ENST00000478842 ASB15Q8WXK1 588 aa7.52□□□□□ -1.21
SSR3-207ENST00000478842 FAM168AQ92567 244 aa7.52□□□□□ -1.21
SSR3-207ENST00000478842 CHMP4CQ96CF2 233 aa7.52□□□□□ -1.21
SSR3-207ENST00000478842 GBP4Q96PP9 640 aa7.52□□□□□ -1.21
SSR3-207ENST00000478842 ZDHHC5Q9C0B5 715 aa7.52□□□□□ -1.21
SSR3-207ENST00000478842 CCDC8Q9H0W5 538 aaPredicted RBP7.52□□□□□ -1.21
SSR3-207ENST00000478842 PCDH18Q9HCL0 1135 aa7.52□□□□□ -1.21
SSR3-207ENST00000478842 TERF2IPQ9NYB0 399 aa7.52□□□□□ -1.21
SSR3-207ENST00000478842 MEGF6O75095 1541 aa7.52□□□□□ -1.21
SSR3-207ENST00000478842 PCNTO95613 3336 aa7.52□□□□□ -1.21
SSR3-207ENST00000478842 TNRC6CQ9HCJ0 1690 aaKnown RBP7.51□□□□□ -1.21
SSR3-207ENST00000478842 PLEKHG2Q9H7P9 1386 aa7.51□□□□□ -1.21
SSR3-207ENST00000478842 MAP2P11137 1827 aaKnown RBP7.51□□□□□ -1.21
SSR3-207ENST00000478842 GABRDO14764 452 aa7.51□□□□□ -1.21
SSR3-207ENST00000478842 KDM1AO60341 852 aa7.51□□□□□ -1.21
SSR3-207ENST00000478842 PEX10O60683 326 aa7.51□□□□□ -1.21
SSR3-207ENST00000478842 CFBP00751 764 aa7.51□□□□□ -1.21
SSR3-207ENST00000478842 LRG1P02750 347 aa7.51□□□□□ -1.21
SSR3-207ENST00000478842 MMEP08473 750 aa7.51□□□□□ -1.21
SSR3-207ENST00000478842 ENO2P09104 434 aaPredicted RBP7.51□□□□□ -1.21
SSR3-207ENST00000478842 AOAHP28039 575 aa7.51□□□□□ -1.21
SSR3-207ENST00000478842 HOXC9P31274 260 aa7.51□□□□□ -1.21
SSR3-207ENST00000478842 VIPR1P32241 457 aa7.51□□□□□ -1.21
SSR3-207ENST00000478842 ZNF200P98182 395 aaPredicted RBP7.51□□□□□ -1.21
SSR3-207ENST00000478842 TIGD7Q6NT04 549 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms