RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 ASIC1P78348 528 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 DEFB103AP81534 67 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 POU5F1BQ06416 359 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 MAPK7Q13164 816 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 GIT2Q14161 759 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 E2F4Q16254 413 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 MAPK6Q16659 721 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 ARSHQ5FYA8 562 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 CDCA2Q69YH5 1023 aaPredicted RBP12.56□□□□□ -0.4
SRRT-211ENST00000478693 TWF2Q6IBS0 349 aaKnown RBP12.56□□□□□ -0.4
SRRT-211ENST00000478693 FAM117BQ6P1L5 589 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.56□□□□□ -0.4
SRRT-211ENST00000478693 DAW1Q8N136 415 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 CCDC34Q96HJ3 373 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 GBP4Q96PP9 640 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 ADAM2Q99965 735 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 ZBED2Q9BTP6 218 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 GOLPH3LQ9H4A5 285 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 C17orf75Q9HAS0 396 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 PRMT7Q9NVM4 692 aaPredicted RBP12.56□□□□□ -0.4
SRRT-211ENST00000478693 SERTAD1Q9UHV2 236 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 KCNG1Q9UIX4 513 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 PHLPP2Q6ZVD8 1323 aa12.56□□□□□ -0.4
SRRT-211ENST00000478693 MKI67P46013 3256 aaKnown RBP12.55□□□□□ -0.4
SRRT-211ENST00000478693 MYMKA6NI61 221 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 H0YCG3 227 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 SLC16A4O15374 487 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 EFNA5P52803 228 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 MBTD1Q05BQ5 628 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 STRN3Q13033 797 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 PCBP1Q15365 356 aaKnown RBP eCLIP12.55□□□□□ -0.4
SRRT-211ENST00000478693 IFNLR1Q8IU57 520 aaPredicted RBP12.55□□□□□ -0.4
SRRT-211ENST00000478693 CCDC65Q8IXS2 484 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 RNF169Q8NCN4 708 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 CNNM3Q8NE01 707 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 LINC01599Q8WXQ3 324 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 CPB2Q96IY4 423 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 NFKBIZQ9BYH8 718 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 TMX1Q9H3N1 280 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 MINDY3Q9H8M7 445 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 C1orf112Q9NSG2 853 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 AGPAT5Q9NUQ2 364 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 DACT1Q9NYF0 836 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 USP25Q9UHP3 1055 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 HPSEQ9Y251 543 aa12.55□□□□□ -0.4
SRRT-211ENST00000478693 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.54□□□□□ -0.4
SRRT-211ENST00000478693 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.54□□□□□ -0.4
SRRT-211ENST00000478693 K7ERI5 159 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 TRAK2O60296 914 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 MGEA5O60502 916 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 TSPAN1O60635 241 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 SLFN14P0C7P3 912 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 STAG3L1P0CL83 205 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 GAP43P17677 238 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 AXLP30530 894 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 PRPF4BQ13523 1007 aaKnown RBP12.54□□□□□ -0.4
SRRT-211ENST00000478693 NOTUMQ6P988 496 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 TMCO2Q7Z6W1 182 aaPredicted RBP12.54□□□□□ -0.4
SRRT-211ENST00000478693 SFR1Q86XK3 245 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 FAM178BQ8IXR5 827 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 PHOSPHO2Q8TCD6 241 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 BICD1Q96G01 975 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 PRIMPOLQ96LW4 560 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 TRIM6Q9C030 488 aaPredicted RBP12.54□□□□□ -0.4
SRRT-211ENST00000478693 TSPYL2Q9H2G4 693 aaPredicted RBP12.54□□□□□ -0.4
SRRT-211ENST00000478693 BLZF1Q9H2G9 400 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 CHST12Q9NRB3 414 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 PANK4Q9NVE7 773 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 KBTBD4Q9NVX7 518 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 RNF216Q9NWF9 866 aaPredicted RBP12.54□□□□□ -0.4
SRRT-211ENST00000478693 ADGRA3Q8IWK6 1321 aa12.54□□□□□ -0.4
SRRT-211ENST00000478693 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.53□□□□□ -0.4
SRRT-211ENST00000478693 GOLGA6L22H0YM25 854 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 ENPP3O14638 875 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 B4GALT5O43286 388 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 ACTN4O43707 911 aaKnown RBP12.53□□□□□ -0.4
SRRT-211ENST00000478693 TLL1O43897 1013 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 ZNF202O95125 648 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 SARSP49591 514 aaKnown RBP12.53□□□□□ -0.4
SRRT-211ENST00000478693 RAB27AP51159 221 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 RABGGTBP53611 331 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 RAB30Q15771 203 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 LONRF3Q496Y0 759 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 HERC4Q5GLZ8 1057 aaPredicted RBP12.53□□□□□ -0.4
SRRT-211ENST00000478693 RASIP1Q5U651 963 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 PPP4R3CPQ6ZMV5 832 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 FAM43BQ6ZT52 329 aaPredicted RBP12.53□□□□□ -0.4
SRRT-211ENST00000478693 SLC24A5Q71RS6 500 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 NPAS4Q8IUM7 802 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 HERC6Q8IVU3 1022 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 GRAMD1CQ8IYS0 662 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 TMEM87AQ8NBN3 555 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 SPIRE2Q8WWL2 714 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 YME1L1Q96TA2 773 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 ADPGKQ9BRR6 497 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 TRIM9Q9C026 710 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 MRPL44Q9H9J2 332 aaKnown RBP12.53□□□□□ -0.4
SRRT-211ENST00000478693 RGS18Q9NS28 235 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 TBC1D7Q9P0N9 293 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 ARHGAP28Q9P2N2 729 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms