RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 ACVR2BQ13705 512 aa7.37□□□□□ -1.23
HOXB3-209ENST00000478644 KIAA1755Q5JYT7 1200 aa7.37□□□□□ -1.23
HOXB3-209ENST00000478644 GJC2Q5T442 439 aaPredicted RBP7.37□□□□□ -1.23
HOXB3-209ENST00000478644 IQSEC1Q6DN90 963 aa7.37□□□□□ -1.23
HOXB3-209ENST00000478644 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
HOXB3-209ENST00000478644 SLC17A8Q8NDX2 589 aa7.37□□□□□ -1.23
HOXB3-209ENST00000478644 TRPV1Q8NER1 839 aa7.37□□□□□ -1.23
HOXB3-209ENST00000478644 CEP95Q96GE4 821 aa7.37□□□□□ -1.23
HOXB3-209ENST00000478644 MTIF3Q9H2K0 278 aaKnown RBP7.37□□□□□ -1.23
HOXB3-209ENST00000478644 GOLGA2P5Q9HBQ8 144 aa7.37□□□□□ -1.23
HOXB3-209ENST00000478644 STARD7Q9NQZ5 370 aa7.37□□□□□ -1.23
HOXB3-209ENST00000478644 VAV3Q9UKW4 847 aa7.37□□□□□ -1.23
HOXB3-209ENST00000478644 ATP11BQ9Y2G3 1177 aa7.37□□□□□ -1.23
HOXB3-209ENST00000478644 RLFQ13129 1914 aa7.37□□□□□ -1.23
HOXB3-209ENST00000478644 CEP290O15078 2479 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 CYP2D7A0A087X1C5 515 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 A0A0U1RQG5 324 aaPredicted RBP7.36□□□□□ -1.23
HOXB3-209ENST00000478644 KIAA0355O15063 1070 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 PEX10O60683 326 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 KPNA6O60684 536 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 CELA3AP09093 270 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 RAG1P15918 1043 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 ITGB5P18084 799 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 GJA9P57773 515 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 PRKCQQ04759 706 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 PPIGQ13427 754 aaKnown RBP eCLIP7.36□□□□□ -1.23
HOXB3-209ENST00000478644 PPM1JQ5JR12 505 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 ZBTB37Q5TC79 503 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 PCNX4Q63HM2 1172 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 BTNL9Q6UXG8 535 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 CPXCR1Q8N123 301 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 TMEM199Q8N511 208 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 SAMD3Q8N6K7 520 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 KLHDC9Q8NEP7 349 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 FLCNQ8NFG4 579 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 SEC62Q99442 399 aaKnown RBP7.36□□□□□ -1.23
HOXB3-209ENST00000478644 UPF3AQ9H1J1 476 aaKnown RBP7.36□□□□□ -1.23
HOXB3-209ENST00000478644 FBXO28Q9NVF7 368 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 CTNNA3Q9UI47 895 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 STX8Q9UNK0 236 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 AK5Q9Y6K8 562 aa7.36□□□□□ -1.23
HOXB3-209ENST00000478644 GREB1LQ9C091 1923 aaPredicted RBP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 BAZ2AQ9UIF9 1905 aaKnown RBP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 RAD50Q92878 1312 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 A0A1W2PQ45 241 aaPredicted RBP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 A0A1W2PQY0 241 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 NKRFO15226 690 aaKnown RBP eCLIP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 RANBP6O60518 1105 aaKnown RBP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 TIMP1P01033 207 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 ICAM1P05362 532 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 PGK2P07205 417 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 SUPT20HL2P0C7V6 817 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 TOP1P11387 765 aaKnown RBP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 SDSP20132 328 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 ACLYP53396 1101 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 FAM47AQ5JRC9 791 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 GPATCH4Q5T3I0 446 aaKnown RBP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 MFSD6Q6ZSS7 791 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 CENPQQ7L2Z9 268 aaPredicted RBP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 CYFIP1Q7L576 1253 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 SPRED2Q7Z698 418 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 C12orf40Q86WS4 652 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 IQCA1Q86XH1 822 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 DGKHQ86XP1 1220 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 RPUSD2Q8IZ73 545 aaKnown RBP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 PLD6Q8N2A8 252 aaKnown RBP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 KCT2Q8NC54 265 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 DNERQ8NFT8 737 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 ESR2Q92731 530 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 RILPL2Q969X0 211 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 HEXIM2Q96MH2 286 aaKnown RBP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 AP5M1Q9H0R1 490 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 TNKS2Q9H2K2 1166 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 EPB41L4AQ9HCS5 686 aaPredicted RBP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 SSU72Q9NP77 194 aaKnown RBP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 VTA1Q9NP79 307 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 MTMR10Q9NXD2 777 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 MAP3K20Q9NYL2 800 aaKnown RBP7.35□□□□□ -1.23
HOXB3-209ENST00000478644 U3KQE9 123 aa7.35□□□□□ -1.23
HOXB3-209ENST00000478644 ARVCFO00192 962 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 ZNF213O14771 459 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 FOXP2O15409 715 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 PRDM1O75626 825 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 SNAI1O95863 264 aaPredicted RBP7.34□□□□□ -1.23
HOXB3-209ENST00000478644 CENPBP07199 599 aaPredicted RBP7.34□□□□□ -1.23
HOXB3-209ENST00000478644 PFKMP08237 780 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 C6orf222P0C671 652 aaPredicted RBP7.34□□□□□ -1.23
HOXB3-209ENST00000478644 JUNBP17275 347 aaPredicted RBP7.34□□□□□ -1.23
HOXB3-209ENST00000478644 MCCP23508 829 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 EIF4BP23588 611 aaKnown RBP7.34□□□□□ -1.23
HOXB3-209ENST00000478644 CPT1AP50416 773 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 CDK7P50613 346 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 RPS26P62854 115 aaKnown RBP7.34□□□□□ -1.23
HOXB3-209ENST00000478644 TNFAIP2Q03169 654 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 TLE2Q04725 743 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 FPGSQ05932 587 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 KCNA10Q16322 511 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 IFI16Q16666 785 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms