RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 ATP2C1P98194 919 aaPredicted RBP20.88■□□□□ 0.93
SREBF1-212ENST00000478616 SKIV2LQ15477 1246 aaKnown RBP20.88■□□□□ 0.93
SREBF1-212ENST00000478616 LONRF3Q496Y0 759 aa20.88■□□□□ 0.93
SREBF1-212ENST00000478616 MCTP1Q6DN14 999 aa20.88■□□□□ 0.93
SREBF1-212ENST00000478616 AGMOQ6ZNB7 445 aa20.88■□□□□ 0.93
SREBF1-212ENST00000478616 ADGRD2Q7Z7M1 963 aa20.88■□□□□ 0.93
SREBF1-212ENST00000478616 EXOC8Q8IYI6 725 aa20.88■□□□□ 0.93
SREBF1-212ENST00000478616 HELQQ8TDG4 1101 aa20.88■□□□□ 0.93
SREBF1-212ENST00000478616 LRRC15Q8TF66 581 aa20.88■□□□□ 0.93
SREBF1-212ENST00000478616 NECAB3Q96P71 396 aaPredicted RBP20.88■□□□□ 0.93
SREBF1-212ENST00000478616 LMAN2LQ9H0V9 348 aa20.88■□□□□ 0.93
SREBF1-212ENST00000478616 POLR3FQ9H1D9 316 aaPredicted RBP20.88■□□□□ 0.93
SREBF1-212ENST00000478616 POLD4Q9HCU8 107 aa20.88■□□□□ 0.93
SREBF1-212ENST00000478616 FAM105AQ9NUU6 356 aa20.88■□□□□ 0.93
SREBF1-212ENST00000478616 TTLL13PA6NNM8 815 aa20.87■□□□□ 0.93
SREBF1-212ENST00000478616 EOMESO95936 686 aa20.87■□□□□ 0.93
SREBF1-212ENST00000478616 POU5F1BQ06416 359 aa20.87■□□□□ 0.93
SREBF1-212ENST00000478616 HYAL1Q12794 435 aa20.87■□□□□ 0.93
SREBF1-212ENST00000478616 PDIA5Q14554 519 aa20.87■□□□□ 0.93
SREBF1-212ENST00000478616 MAEAQ7L5Y9 396 aa20.87■□□□□ 0.93
SREBF1-212ENST00000478616 MRPL10Q7Z7H8 261 aaKnown RBP20.87■□□□□ 0.93
SREBF1-212ENST00000478616 SMG8Q8ND04 991 aaKnown RBP20.87■□□□□ 0.93
SREBF1-212ENST00000478616 HLA-CQ95604 372 aa20.87■□□□□ 0.93
SREBF1-212ENST00000478616 NACC1Q96RE7 527 aa20.87■□□□□ 0.93
SREBF1-212ENST00000478616 INO80BQ9C086 356 aaPredicted RBP20.87■□□□□ 0.93
SREBF1-212ENST00000478616 NSUN3Q9H649 340 aaKnown RBP20.87■□□□□ 0.93
SREBF1-212ENST00000478616 UBE2ZQ9H832 354 aaPredicted RBP20.87■□□□□ 0.93
SREBF1-212ENST00000478616 DACT1Q9NYF0 836 aa20.87■□□□□ 0.93
SREBF1-212ENST00000478616 LRWD1Q9UFC0 647 aa20.87■□□□□ 0.93
SREBF1-212ENST00000478616 COG5Q9UP83 839 aa20.87■□□□□ 0.93
SREBF1-212ENST00000478616 MYH15Q9Y2K3 1946 aa20.86■□□□□ 0.93
SREBF1-212ENST00000478616 CSPG5O95196 566 aa20.86■□□□□ 0.93
SREBF1-212ENST00000478616 PRPHP41219 470 aa20.86■□□□□ 0.93
SREBF1-212ENST00000478616 DLX2Q07687 328 aaPredicted RBP20.86■□□□□ 0.93
SREBF1-212ENST00000478616 PTPROQ16827 1216 aa20.86■□□□□ 0.93
SREBF1-212ENST00000478616 CTC1Q2NKJ3 1217 aa20.86■□□□□ 0.93
SREBF1-212ENST00000478616 TIGD5Q53EQ6 642 aa20.86■□□□□ 0.93
SREBF1-212ENST00000478616 NAALADL2Q58DX5 795 aa20.86■□□□□ 0.93
SREBF1-212ENST00000478616 RILPL1Q5EBL4 403 aa20.86■□□□□ 0.93
SREBF1-212ENST00000478616 LARP1BQ659C4 914 aaKnown RBP20.86■□□□□ 0.93
SREBF1-212ENST00000478616 TWF2Q6IBS0 349 aaKnown RBP20.86■□□□□ 0.93
SREBF1-212ENST00000478616 RNF169Q8NCN4 708 aa20.86■□□□□ 0.93
SREBF1-212ENST00000478616 POF1BQ8WVV4 589 aa20.86■□□□□ 0.93
SREBF1-212ENST00000478616 PNMA5Q96PV4 448 aa20.86■□□□□ 0.93
SREBF1-212ENST00000478616 EIF2AQ9BY44 585 aaKnown RBP20.86■□□□□ 0.93
SREBF1-212ENST00000478616 NFKBIZQ9BYH8 718 aa20.86■□□□□ 0.93
SREBF1-212ENST00000478616 TDRD15B5MCY1 1934 aaKnown RBP20.86■□□□□ 0.93
SREBF1-212ENST00000478616 E9PMD0 336 aa20.85■□□□□ 0.93
SREBF1-212ENST00000478616 LINC01565O15544 149 aa20.85■□□□□ 0.93
SREBF1-212ENST00000478616 B4GALT5O43286 388 aa20.85■□□□□ 0.93
SREBF1-212ENST00000478616 OFD1O75665 1012 aa20.85■□□□□ 0.93
SREBF1-212ENST00000478616 CYP11B2P19099 503 aa20.85■□□□□ 0.93
SREBF1-212ENST00000478616 MUTP22033 750 aa20.85■□□□□ 0.93
SREBF1-212ENST00000478616 CCT6AP40227 531 aaKnown RBP20.85■□□□□ 0.93
SREBF1-212ENST00000478616 ERVFC1P60507 584 aa20.85■□□□□ 0.93
SREBF1-212ENST00000478616 MXD4Q14582 209 aaPredicted RBP20.85■□□□□ 0.93
SREBF1-212ENST00000478616 PADI6Q6TGC4 694 aa20.85■□□□□ 0.93
SREBF1-212ENST00000478616 TMEM173Q86WV6 379 aaPredicted RBP20.85■□□□□ 0.93
SREBF1-212ENST00000478616 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.85■□□□□ 0.93
SREBF1-212ENST00000478616 CPB2Q96IY4 423 aa20.85■□□□□ 0.93
SREBF1-212ENST00000478616 RNF39Q9H2S5 420 aa20.85■□□□□ 0.93
SREBF1-212ENST00000478616 KIAA1024Q9UPX6 916 aa20.85■□□□□ 0.93
SREBF1-212ENST00000478616 KIF3AQ9Y496 699 aa20.85■□□□□ 0.93
SREBF1-212ENST00000478616 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.85■□□□□ 0.93
SREBF1-212ENST00000478616 PCDHB2Q9Y5E7 798 aa20.85■□□□□ 0.93
SREBF1-212ENST00000478616 MYH11P35749 1972 aa20.85■□□□□ 0.93
SREBF1-212ENST00000478616 TRIP11Q15643 1979 aa20.85■□□□□ 0.93
SREBF1-212ENST00000478616 LAD1O00515 517 aa20.84■□□□□ 0.93
SREBF1-212ENST00000478616 FSCN2O14926 492 aa20.84■□□□□ 0.93
SREBF1-212ENST00000478616 FGF18O76093 207 aa20.84■□□□□ 0.93
SREBF1-212ENST00000478616 ARF4P18085 180 aaPredicted RBP20.84■□□□□ 0.93
SREBF1-212ENST00000478616 GRIN1Q05586 938 aa20.84■□□□□ 0.93
SREBF1-212ENST00000478616 CDCA2Q69YH5 1023 aaPredicted RBP20.84■□□□□ 0.93
SREBF1-212ENST00000478616 DAW1Q8N136 415 aa20.84■□□□□ 0.93
SREBF1-212ENST00000478616 LRRC43Q8N309 656 aa20.84■□□□□ 0.93
SREBF1-212ENST00000478616 ERMNQ8TAM6 284 aa20.84■□□□□ 0.93
SREBF1-212ENST00000478616 ADAMTS19Q8TE59 1207 aa20.84■□□□□ 0.93
SREBF1-212ENST00000478616 BCL7CQ8WUZ0 217 aaPredicted RBP20.84■□□□□ 0.93
SREBF1-212ENST00000478616 BHMT2Q9H2M3 363 aa20.84■□□□□ 0.93
SREBF1-212ENST00000478616 DDX19AQ9NUU7 478 aaKnown RBP20.84■□□□□ 0.93
SREBF1-212ENST00000478616 C5orf42Q9H799 3197 aa20.83■□□□□ 0.93
SREBF1-212ENST00000478616 H3BQV1 296 aa20.83■□□□□ 0.93
SREBF1-212ENST00000478616 KCNT2Q6UVM3 1135 aa20.83■□□□□ 0.93
SREBF1-212ENST00000478616 CDR2LQ86X02 465 aaPredicted RBP20.83■□□□□ 0.93
SREBF1-212ENST00000478616 SLC39A11Q8N1S5 342 aa20.83■□□□□ 0.93
SREBF1-212ENST00000478616 SNX29Q8TEQ0 813 aa20.83■□□□□ 0.93
SREBF1-212ENST00000478616 CCDC113Q9H0I3 377 aa20.83■□□□□ 0.93
SREBF1-212ENST00000478616 TBC1D13Q9NVG8 400 aa20.83■□□□□ 0.93
SREBF1-212ENST00000478616 USP20Q9Y2K6 914 aa20.83■□□□□ 0.93
SREBF1-212ENST00000478616 HOXA2O43364 376 aa20.82■□□□□ 0.92
SREBF1-212ENST00000478616 TBX10O75333 385 aa20.82■□□□□ 0.92
SREBF1-212ENST00000478616 LAG3P18627 525 aa20.82■□□□□ 0.92
SREBF1-212ENST00000478616 PLCB3Q01970 1234 aa20.82■□□□□ 0.92
SREBF1-212ENST00000478616 MAPK7Q13164 816 aa20.82■□□□□ 0.92
SREBF1-212ENST00000478616 HYIQ5T013 277 aa20.82■□□□□ 0.92
SREBF1-212ENST00000478616 HAUS3Q68CZ6 603 aa20.82■□□□□ 0.92
SREBF1-212ENST00000478616 VN1R2Q8NFZ6 395 aa20.82■□□□□ 0.92
SREBF1-212ENST00000478616 PABPC5Q96DU9 382 aaKnown RBP20.82■□□□□ 0.92
SREBF1-212ENST00000478616 RUSC1Q9BVN2 902 aa20.82■□□□□ 0.92
SREBF1-212ENST00000478616 VN1R3Q9BXE9 311 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms