RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	NEMF	O60524	1076 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	EFEMP2	O95967	443 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	EDN1	P05305	212 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	P4HB	P07237	508 aa	Known RBP	4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	DARS	P14868	501 aa	Known RBP	4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	NDUFV2	P19404	249 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	GJB2	P29033	226 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	ARL2	P36404	184 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	QARS	P47897	775 aa	Known RBP	4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	NPEPPS	P55786	919 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	GRB10	Q13322	594 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	CAMK1	Q14012	370 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	IKBKE	Q14164	716 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	HYI	Q5T013	277 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	UBXN11	Q5T124	520 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	SLFN12	Q8IYM2	578 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	CYP4X1	Q8N118	509 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	FAM161B	Q96MY7	647 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	RAD9A	Q99638	391 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	FAM49A	Q9H0Q0	323 aa	Predicted RBP	4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	PRDM12	Q9H4Q4	367 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	CYP26B1	Q9NR63	512 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	VCAN	P13611	3396 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	RFXAP	O00287	272 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	INPPL1	O15357	1258 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	GPR37L1	O60883	481 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	XBP1	P17861	261 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	SARS	P49591	514 aa	Known RBP	4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	GATM	P50440	423 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	ATP2C1	P98194	919 aa	Predicted RBP	4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	REST	Q13127	1097 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	CALCRL	Q16602	461 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	TTC38	Q5R3I4	469 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	EFCAB12	Q6NXP0	572 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	NEK9	Q8TD19	979 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	KCNN1	Q92952	543 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	SNX21	Q969T3	373 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	THAP11	Q96EK4	314 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	OSMR	Q99650	979 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	SH2D3A	Q9BRG2	576 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	C17orf80	Q9BSJ5	609 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	MTIF3	Q9H2K0	278 aa	Known RBP	4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	CWH43	Q9H720	699 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	MINDY3	Q9H8M7	445 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	CEP131	Q9UPN4	1083 aa		4.75	□□□□□ -1.65
POLR2B-208	ENST00000478188	ZBBX	A8MT70	800 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	AMH	P03971	560 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	YWHAB	P31946	246 aa	Known RBP	4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	PRPH	P41219	470 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	MCM2	P49736	904 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	RARRES1	P49788	294 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	GUCA2A	Q02747	115 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	CTTN	Q14247	550 aa	Known RBP	4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	KIZ	Q2M2Z5	673 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	TMEM266	Q2M3C6	531 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	PPP2R2D	Q66LE6	453 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	LRRC55	Q6ZSA7	311 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	CATSPER3	Q86XQ3	398 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	NPAS4	Q8IUM7	802 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	ASAP3	Q8TDY4	903 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	PNMA5	Q96PV4	448 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	CCDC113	Q9H0I3	377 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	ELAC1	Q9H777	363 aa	Known RBP	4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	TTC12	Q9H892	705 aa	Predicted RBP	4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	SUGCT	Q9HAC7	445 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	TUFT1	Q9NNX1	390 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	ANKEF1	Q9NU02	776 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	MSRA	Q9UJ68	235 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	DBR1	Q9UK59	544 aa	Known RBP	4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	ST3GAL5	Q9UNP4	418 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	GTF3C3	Q9Y5Q9	886 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	MRPL42	Q9Y6G3	142 aa	Known RBP	4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	C2orf16	Q68DN1	1984 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	SPTLC1	O15269	473 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	B4GALT3	O60512	393 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	OR52Z1	P0C646	297 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	MUT	P22033	750 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	DNAJB1	P25685	340 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	HOXA11	P31270	313 aa	Predicted RBP	4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	RFC5	P40937	340 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	MAPK7	Q13164	816 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	PTPA	Q15257	358 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	MTERF2	Q49AM1	385 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	TMEM119	Q4V9L6	283 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	CLLU1OS	Q5K130	101 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	IER5	Q5VY09	327 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	NCAPH2	Q6IBW4	605 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	BRICD5	Q6PL45	260 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	KCNK18	Q7Z418	384 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	ZNF410	Q86VK4	478 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	KSR1	Q8IVT5	923 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	CMTR2	Q8IYT2	770 aa	Known RBP	4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	DAW1	Q8N136	415 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	MAFA	Q8NHW3	353 aa	Predicted RBP	4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	GDPD5	Q8WTR4	605 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	BSND	Q8WZ55	320 aa		4.74	□□□□□ -1.65
POLR2B-208	ENST00000478188	CASD1	Q96PB1	797 aa		4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms