RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 FANCGO15287 622 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 ZRANB2O95218 330 aaKnown RBP eCLIP5.49□□□□□ -1.53
SF3B6-202ENST00000478050 PRNPP04156 253 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 SERPINB2P05120 415 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 F13BP05160 661 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 EPHA1P21709 976 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 CCNE1P24864 410 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 KRT9P35527 623 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 CCT6AP40227 531 aaKnown RBP5.49□□□□□ -1.53
SF3B6-202ENST00000478050 DNM2P50570 870 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 RHBDL3P58872 404 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 UBXN1Q04323 297 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 MTF1Q14872 753 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 ECM1Q16610 540 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 CPSF6Q16630 551 aaKnown RBP eCLIP5.49□□□□□ -1.53
SF3B6-202ENST00000478050 SLC4A8Q2Y0W8 1093 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 ASPRV1Q53RT3 343 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 CYP4F22Q6NT55 531 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 RSRC2Q7L4I2 434 aaKnown RBP5.49□□□□□ -1.53
SF3B6-202ENST00000478050 SRGAP1Q7Z6B7 1085 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 AMIGO3Q86WK7 504 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 REXO1Q8N1G1 1221 aaKnown RBP5.49□□□□□ -1.53
SF3B6-202ENST00000478050 MB21D1Q8N884 522 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 SLC44A5Q8NCS7 719 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 LRRN4CLQ8ND94 238 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 AGBL5Q8NDL9 886 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 CPLX3Q8WVH0 158 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 PIK3R5Q8WYR1 880 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 P2RX5Q93086 422 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 CALML4Q96GE6 196 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 NUP88Q99567 741 aaPredicted RBP5.49□□□□□ -1.53
SF3B6-202ENST00000478050 NUP58Q9BVL2 599 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 RIOX1Q9H6W3 641 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 EXOC1Q9NV70 894 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 SWAP70Q9UH65 585 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 CDC23Q9UJX2 597 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 GDAQ9Y2T3 454 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 SBF1O95248 1867 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 MYH10P35580 1976 aa5.49□□□□□ -1.53
SF3B6-202ENST00000478050 THSD7BQ9C0I4 1608 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 COL11A2P13942 1736 aaPredicted RBP5.48□□□□□ -1.53
SF3B6-202ENST00000478050 PP2D1A8MPX8 630 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 TM4SF5O14894 197 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 CYP26A1O43174 497 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 SLC26A4O43511 780 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 CCNT1O60563 726 aaKnown RBP5.48□□□□□ -1.53
SF3B6-202ENST00000478050 FAM13AO94988 1023 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 KIF20AO95235 890 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 FGFR1OPO95684 399 aaKnown RBP5.48□□□□□ -1.53
SF3B6-202ENST00000478050 TUBBP07437 444 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 GOLGA8HP0CJ92 632 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 PNMA6AP0CW24 399 aaPredicted RBP5.48□□□□□ -1.53
SF3B6-202ENST00000478050 SRGNP10124 158 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 GYS1P13807 737 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 PLCG1P19174 1290 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 MPSTP25325 297 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 CYLC1P35663 651 aaPredicted RBP5.48□□□□□ -1.53
SF3B6-202ENST00000478050 ADCY7P51828 1080 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 ERVK-24P63145 666 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 ASIC1P78348 528 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 BRD3Q15059 726 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 WHAMMP3Q1A5X7 153 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 TMEM266Q2M3C6 531 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 TSNAXIP1Q2TAA8 658 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 KIF4BQ2VIQ3 1234 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 LETM2Q2VYF4 491 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 SGO2Q562F6 1265 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 ZNF569Q5MCW4 686 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 MFSD14BQ5SR56 506 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 TEX35Q5T0J7 233 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 ZNF648Q5T619 568 aaPredicted RBP5.48□□□□□ -1.53
SF3B6-202ENST00000478050 TTI2Q6NXR4 508 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 CNNM4Q6P4Q7 775 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 FOXR2Q6PJQ5 311 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 ZNF662Q6ZS27 426 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 CTU1Q7Z7A3 348 aaKnown RBP5.48□□□□□ -1.53
SF3B6-202ENST00000478050 IRF2BP1Q8IU81 584 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 SP8Q8IXZ3 490 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 SLC35F6Q8N357 371 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 C12orf50Q8NA57 414 aaPredicted RBP5.48□□□□□ -1.53
SF3B6-202ENST00000478050 FLCNQ8NFG4 579 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 OR8K1Q8NGG5 319 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 TBC1D16Q8TBP0 767 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 ZNF507Q8TCN5 953 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 WNT8BQ93098 351 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 COL26A1Q96A83 441 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 CEP95Q96GE4 821 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 PIGSQ96S52 555 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 DNAJC7Q99615 494 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 NAP1L4Q99733 375 aaKnown RBP5.48□□□□□ -1.53
SF3B6-202ENST00000478050 NAPGQ99747 312 aaPredicted RBP5.48□□□□□ -1.53
SF3B6-202ENST00000478050 PBX4Q9BYU1 374 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 RAB34Q9BZG1 259 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 TRIM9Q9C026 710 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 LRRC27Q9C0I9 530 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 LZTFL1Q9NQ48 299 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 ZNF446Q9NWS9 450 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 PRDM4Q9UKN5 801 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 CAPN11Q9UMQ6 739 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 FNDC3AQ9Y2H6 1198 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms