RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 RFPL3O75679 317 aa6.26□□□□□ -1.41
LMBR1-216ENST00000477983 PTX3P26022 381 aaPredicted RBP6.26□□□□□ -1.41
LMBR1-216ENST00000477983 INHBEP58166 350 aa6.26□□□□□ -1.41
LMBR1-216ENST00000477983 SLC25A3Q00325 362 aa6.26□□□□□ -1.41
LMBR1-216ENST00000477983 CRHR2Q13324 411 aa6.26□□□□□ -1.41
LMBR1-216ENST00000477983 ZNF460Q14592 562 aa6.26□□□□□ -1.41
LMBR1-216ENST00000477983 MYBPC3Q14896 1274 aa6.26□□□□□ -1.41
LMBR1-216ENST00000477983 Q6ZRM9 215 aa6.26□□□□□ -1.41
LMBR1-216ENST00000477983 GSPT2Q8IYD1 628 aaKnown RBP6.26□□□□□ -1.41
LMBR1-216ENST00000477983 TUBGCP5Q96RT8 1024 aa6.26□□□□□ -1.41
LMBR1-216ENST00000477983 TCF25Q9BQ70 676 aa6.26□□□□□ -1.41
LMBR1-216ENST00000477983 PITHD1Q9GZP4 211 aaPredicted RBP6.26□□□□□ -1.41
LMBR1-216ENST00000477983 POLR3BQ9NW08 1133 aaPredicted RBP6.26□□□□□ -1.41
LMBR1-216ENST00000477983 XDHP47989 1333 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 A0A087X1B8 175 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 A0A0A6YYJ9 748 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 GOLGA8BA8MQT2 603 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 JUNP05412 331 aaKnown RBP6.25□□□□□ -1.41
LMBR1-216ENST00000477983 MAN2A2P49641 1150 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 CREB3L3Q68CJ9 461 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 CDCA2Q69YH5 1023 aaPredicted RBP6.25□□□□□ -1.41
LMBR1-216ENST00000477983 ZNF662Q6ZS27 426 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 HTR3DQ70Z44 454 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 UBE2R2Q712K3 238 aaPredicted RBP6.25□□□□□ -1.41
LMBR1-216ENST00000477983 ZNF627Q7L945 461 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 UBXN4Q92575 508 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 RPGRQ92834 1020 aaKnown RBP6.25□□□□□ -1.41
LMBR1-216ENST00000477983 DRC1Q96MC2 740 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 PRRX2Q99811 253 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 OSBPL6Q9BZF3 934 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 IL23AQ9NPF7 189 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 SLC2A4RGQ9NR83 387 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 TMEM260Q9NX78 707 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 SPO11Q9Y5K1 396 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 EFCAB5A4FU69 1503 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 FHOD3Q2V2M9 1422 aa6.25□□□□□ -1.41
LMBR1-216ENST00000477983 DAPK3O43293 454 aa6.24□□□□□ -1.41
LMBR1-216ENST00000477983 SLC9A1P19634 815 aa6.24□□□□□ -1.41
LMBR1-216ENST00000477983 SDSP20132 328 aa6.24□□□□□ -1.41
LMBR1-216ENST00000477983 FLT3P36888 993 aa6.24□□□□□ -1.41
LMBR1-216ENST00000477983 RABGGTBP53611 331 aa6.24□□□□□ -1.41
LMBR1-216ENST00000477983 CNGB1Q14028 1251 aaPredicted RBP6.24□□□□□ -1.41
LMBR1-216ENST00000477983 TOB2Q14106 344 aaPredicted RBP6.24□□□□□ -1.41
LMBR1-216ENST00000477983 ELAVL1Q15717 326 aaKnown RBP6.24□□□□□ -1.41
LMBR1-216ENST00000477983 CCDC144BQ3MJ40 725 aa6.24□□□□□ -1.41
LMBR1-216ENST00000477983 FKBP15Q5T1M5 1219 aa6.24□□□□□ -1.41
LMBR1-216ENST00000477983 PIK3R6Q5UE93 754 aa6.24□□□□□ -1.41
LMBR1-216ENST00000477983 PRAMEF9Q5VWM5 478 aa6.24□□□□□ -1.41
LMBR1-216ENST00000477983 MFSD5Q6N075 450 aa6.24□□□□□ -1.41
LMBR1-216ENST00000477983 PCSK4Q6UW60 755 aa6.24□□□□□ -1.41
LMBR1-216ENST00000477983 Q6ZPA2 131 aa6.24□□□□□ -1.41
LMBR1-216ENST00000477983 CLIP3Q96DZ5 547 aa6.24□□□□□ -1.41
LMBR1-216ENST00000477983 ELF4Q99607 663 aaPredicted RBP6.24□□□□□ -1.41
LMBR1-216ENST00000477983 SYNPO2Q9UMS6 1093 aa6.24□□□□□ -1.41
LMBR1-216ENST00000477983 MAGI1Q96QZ7 1491 aaPredicted RBP6.23□□□□□ -1.41
LMBR1-216ENST00000477983 MAFGO15525 162 aa6.23□□□□□ -1.41
LMBR1-216ENST00000477983 MTSS1O43312 755 aa6.23□□□□□ -1.41
LMBR1-216ENST00000477983 TOX4O94842 621 aa6.23□□□□□ -1.41
LMBR1-216ENST00000477983 ASMTLO95671 621 aa6.23□□□□□ -1.41
LMBR1-216ENST00000477983 KIR2DL3P43628 341 aa6.23□□□□□ -1.41
LMBR1-216ENST00000477983 ADCY2Q08462 1091 aa6.23□□□□□ -1.41
LMBR1-216ENST00000477983 ESRP1Q6NXG1 681 aaKnown RBP6.23□□□□□ -1.41
LMBR1-216ENST00000477983 MRGPRGQ86SM5 289 aa6.23□□□□□ -1.41
LMBR1-216ENST00000477983 PHYKPLQ8IUZ5 450 aa6.23□□□□□ -1.41
LMBR1-216ENST00000477983 INTS7Q9NVH2 962 aaKnown RBP6.23□□□□□ -1.41
LMBR1-216ENST00000477983 GPRC5BQ9NZH0 403 aa6.23□□□□□ -1.41
LMBR1-216ENST00000477983 DNAI1Q9UI46 699 aa6.23□□□□□ -1.41
LMBR1-216ENST00000477983 GRIN2AQ12879 1464 aa6.22□□□□□ -1.41
LMBR1-216ENST00000477983 KLRG2A4D1S0 409 aaPredicted RBP6.22□□□□□ -1.41
LMBR1-216ENST00000477983 JMJD7P0C870 316 aa6.22□□□□□ -1.41
LMBR1-216ENST00000477983 KRT4P19013 534 aa6.22□□□□□ -1.41
LMBR1-216ENST00000477983 SMAD3P84022 425 aaKnown RBP6.22□□□□□ -1.41
LMBR1-216ENST00000477983 PABPC4Q13310 644 aaKnown RBP eCLIP6.22□□□□□ -1.41
LMBR1-216ENST00000477983 NAIF1Q69YI7 327 aaPredicted RBP6.22□□□□□ -1.41
LMBR1-216ENST00000477983 KIF18BQ86Y91 864 aa6.22□□□□□ -1.41
LMBR1-216ENST00000477983 ZZZ3Q8IYH5 903 aa6.22□□□□□ -1.41
LMBR1-216ENST00000477983 CMTM4Q8IZR5 234 aa6.22□□□□□ -1.41
LMBR1-216ENST00000477983 PPP1R14CQ8TAE6 165 aa6.22□□□□□ -1.41
LMBR1-216ENST00000477983 GPR87Q9BY21 358 aa6.22□□□□□ -1.41
LMBR1-216ENST00000477983 C14orf93Q9H972 538 aaKnown RBP6.22□□□□□ -1.41
LMBR1-216ENST00000477983 RCAN3Q9UKA8 241 aa6.22□□□□□ -1.41
LMBR1-216ENST00000477983 REXO2Q9Y3B8 237 aaKnown RBP6.22□□□□□ -1.41
LMBR1-216ENST00000477983 IQGAP2Q13576 1575 aa6.22□□□□□ -1.41
LMBR1-216ENST00000477983 SYNJ2O15056 1496 aa6.22□□□□□ -1.41
LMBR1-216ENST00000477983 A0A0A6YYK5 440 aaPredicted RBP6.21□□□□□ -1.42
LMBR1-216ENST00000477983 MFAP3LO75121 409 aa6.21□□□□□ -1.42
LMBR1-216ENST00000477983 PRPF6O94906 941 aaKnown RBP6.21□□□□□ -1.42
LMBR1-216ENST00000477983 HNRNPLP14866 589 aaKnown RBP eCLIP6.21□□□□□ -1.429e-15■■■■■ 52.2
LMBR1-216ENST00000477983 MAN2A1Q16706 1144 aa6.21□□□□□ -1.42
LMBR1-216ENST00000477983 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
LMBR1-216ENST00000477983 CFAP100Q494V2 611 aa6.21□□□□□ -1.42
LMBR1-216ENST00000477983 C1QL3Q5VWW1 255 aa6.21□□□□□ -1.42
LMBR1-216ENST00000477983 KIAA1841Q6NSI8 718 aa6.21□□□□□ -1.42
LMBR1-216ENST00000477983 TIGD7Q6NT04 549 aaPredicted RBP6.21□□□□□ -1.42
LMBR1-216ENST00000477983 SYNPOQ8N3V7 929 aa6.21□□□□□ -1.42
LMBR1-216ENST00000477983 MDGA1Q8NFP4 955 aa6.21□□□□□ -1.42
LMBR1-216ENST00000477983 ZNF512Q96ME7 567 aaPredicted RBP6.21□□□□□ -1.42
LMBR1-216ENST00000477983 MNTQ99583 582 aa6.21□□□□□ -1.42
LMBR1-216ENST00000477983 SOX7Q9BT81 388 aa6.21□□□□□ -1.42
LMBR1-216ENST00000477983 PIF1Q9H611 641 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms