RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 CMTR2Q8IYT2 770 aaKnown RBP9.25□□□□□ -0.93
ERCC8-205ENST00000477893 FBXO18Q8NFZ0 1043 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 ADAMTS19Q8TE59 1207 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 PIGOQ8TEQ8 1089 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 ATXN2LQ8WWM7 1075 aaKnown RBP9.25□□□□□ -0.93
ERCC8-205ENST00000477893 HLA-CQ95604 372 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 ZNF689Q96CS4 500 aaPredicted RBP9.25□□□□□ -0.93
ERCC8-205ENST00000477893 MRPL38Q96DV4 380 aaKnown RBP9.25□□□□□ -0.93
ERCC8-205ENST00000477893 TMX3Q96JJ7 454 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 ASB2Q96Q27 587 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 C11orf84Q9BUA3 381 aaPredicted RBP9.25□□□□□ -0.93
ERCC8-205ENST00000477893 C1orf112Q9NSG2 853 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 NOL7Q9UMY1 257 aaKnown RBP9.25□□□□□ -0.93
ERCC8-205ENST00000477893 PIN4Q9Y237 131 aaKnown RBP9.25□□□□□ -0.93
ERCC8-205ENST00000477893 COL4A3BPQ9Y5P4 624 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 NLRC5Q86WI3 1866 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 WDR81Q562E7 1941 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 IGKV6-21A0A0C4DH24 114 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 USO1O60763 962 aaKnown RBP9.24□□□□□ -0.93
ERCC8-205ENST00000477893 SLITRK3O94933 977 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 OR52Z1P0C646 297 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 POU3F3P20264 500 aaPredicted RBP9.24□□□□□ -0.93
ERCC8-205ENST00000477893 KCNA5P22460 613 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 GJB2P29033 226 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 PBX3P40426 434 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 RFC5P40937 340 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 LAMTOR4Q0VGL1 99 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 DSC3Q14574 896 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 CLUL1Q15846 466 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 TIGD5Q53EQ6 642 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 TWF2Q6IBS0 349 aaKnown RBP9.24□□□□□ -0.93
ERCC8-205ENST00000477893 OTUD6AQ7L8S5 288 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 PACS2Q86VP3 889 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 C4orf19Q8IY42 314 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 ABI1Q8IZP0 508 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 KLHL23Q8NBE8 558 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 HELQQ8TDG4 1101 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 PRPF31Q8WWY3 499 aaKnown RBP9.24□□□□□ -0.93
ERCC8-205ENST00000477893 PSPC1Q8WXF1 523 aaKnown RBP9.24□□□□□ -0.93
ERCC8-205ENST00000477893 LPPQ93052 612 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 TBC1D32Q96NH3 1257 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 MTMR9Q96QG7 549 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 UHRF1Q96T88 793 aaPredicted RBP9.24□□□□□ -0.93
ERCC8-205ENST00000477893 JPH2Q9BR39 696 aaPredicted RBP9.24□□□□□ -0.93
ERCC8-205ENST00000477893 FOXP1Q9H334 677 aaPredicted RBP9.24□□□□□ -0.93
ERCC8-205ENST00000477893 IGFLR1Q9H665 355 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 TMEM161AQ9NX61 479 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 RWDD3Q9Y3V2 267 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 PCDHGC5Q9Y5F6 944 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 TTC3P53804 2025 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 KIAA1671Q9BY89 1806 aa9.24□□□□□ -0.93
ERCC8-205ENST00000477893 TTC28Q96AY4 2481 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 H3BQ06 376 aaPredicted RBP9.23□□□□□ -0.93
ERCC8-205ENST00000477893 H3BQV1 296 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 MED24O75448 989 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 ITGB1P05556 798 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 DNAJB1P25685 340 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 GTF2F1P35269 517 aaKnown RBP eCLIP9.23□□□□□ -0.93
ERCC8-205ENST00000477893 ZNF410Q86VK4 478 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 ECHDC2Q86YB7 292 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 THNSL1Q8IYQ7 743 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 CRIPAKQ8N1N5 446 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 RNF149Q8NC42 400 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 NEK9Q8TD19 979 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 ASAP3Q8TDY4 903 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 SYMPKQ92797 1274 aaKnown RBP9.23□□□□□ -0.93
ERCC8-205ENST00000477893 CLP1Q92989 425 aaKnown RBP9.23□□□□□ -0.93
ERCC8-205ENST00000477893 NSUN3Q9H649 340 aaKnown RBP9.23□□□□□ -0.93
ERCC8-205ENST00000477893 DHX33Q9H6R0 707 aaKnown RBP9.23□□□□□ -0.93
ERCC8-205ENST00000477893 UBE2ZQ9H832 354 aaPredicted RBP9.23□□□□□ -0.93
ERCC8-205ENST00000477893 MINDY3Q9H8M7 445 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 TYW1Q9NV66 732 aaKnown RBP9.23□□□□□ -0.93
ERCC8-205ENST00000477893 CLDND1Q9NY35 253 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 LMCD1Q9NZU5 365 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 INPP5FQ9Y2H2 1132 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 RALGAPA2Q2PPJ7 1873 aa9.23□□□□□ -0.93
ERCC8-205ENST00000477893 MEIS3P2A8K0S8 358 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 C5orf67F2Z3F1 127 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 SMAPO00193 183 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 RB1P06400 928 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 LIG1P18858 919 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 CA8P35219 290 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 IRS1P35568 1242 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 PHKA2P46019 1235 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 ZRSR1Q15695 479 aaKnown RBP9.22□□□□□ -0.93
ERCC8-205ENST00000477893 AAK1Q2M2I8 961 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 CLLU1OSQ5K130 101 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 RBM23Q86U06 439 aaKnown RBP9.22□□□□□ -0.93
ERCC8-205ENST00000477893 FERMT3Q86UX7 667 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 LRRC43Q8N309 656 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 COLGALT1Q8NBJ5 622 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 ERMNQ8TAM6 284 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 MICAL1Q8TDZ2 1067 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 POF1BQ8WVV4 589 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 TCP11Q8WWU5 503 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 CPB2Q96IY4 423 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 CASD1Q96PB1 797 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 HSD17B14Q9BPX1 270 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 PLVAPQ9BX97 442 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 GBP3Q9H0R5 595 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms