RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 NOMO2Q5JPE7 1267 aa13.18□□□□□ -0.3
CPSF7-211ENST00000477890 RARS2Q5T160 578 aaKnown RBP13.18□□□□□ -0.3
CPSF7-211ENST00000477890 GALNT17Q6IS24 598 aa13.18□□□□□ -0.3
CPSF7-211ENST00000477890 CPLX2Q6PUV4 134 aaKnown RBP13.18□□□□□ -0.3
CPSF7-211ENST00000477890 GLB1LQ6UWU2 654 aa13.18□□□□□ -0.3
CPSF7-211ENST00000477890 ANO5Q75V66 913 aa13.18□□□□□ -0.3
CPSF7-211ENST00000477890 KRT25Q7Z3Z0 450 aa13.18□□□□□ -0.3
CPSF7-211ENST00000477890 AUTS2Q8WXX7 1259 aa13.18□□□□□ -0.3
CPSF7-211ENST00000477890 RSPH1Q8WYR4 309 aa13.18□□□□□ -0.3
CPSF7-211ENST00000477890 ZNF274Q96GC6 653 aaPredicted RBP13.18□□□□□ -0.3
CPSF7-211ENST00000477890 NECTIN4Q96NY8 510 aa13.18□□□□□ -0.3
CPSF7-211ENST00000477890 JPH2Q9BR39 696 aaPredicted RBP13.18□□□□□ -0.3
CPSF7-211ENST00000477890 GBP3Q9H0R5 595 aa13.18□□□□□ -0.3
CPSF7-211ENST00000477890 ZBP1Q9H171 429 aa13.18□□□□□ -0.3
CPSF7-211ENST00000477890 TBC1D13Q9NVG8 400 aa13.18□□□□□ -0.3
CPSF7-211ENST00000477890 CARNS1A5YM72 827 aa13.17□□□□□ -0.3
CPSF7-211ENST00000477890 C2CD4DB7Z1M9 353 aa13.17□□□□□ -0.3
CPSF7-211ENST00000477890 EML1O00423 815 aa13.17□□□□□ -0.3
CPSF7-211ENST00000477890 RAB27AP51159 221 aa13.17□□□□□ -0.3
CPSF7-211ENST00000477890 TCF15Q12870 199 aa13.17□□□□□ -0.3
CPSF7-211ENST00000477890 LETM2Q2VYF4 491 aa13.17□□□□□ -0.3
CPSF7-211ENST00000477890 DDX53Q86TM3 631 aaKnown RBP13.17□□□□□ -0.3
CPSF7-211ENST00000477890 C12orf76Q8N812 135 aaPredicted RBP13.17□□□□□ -0.3
CPSF7-211ENST00000477890 KREMEN2Q8NCW0 462 aa13.17□□□□□ -0.3
CPSF7-211ENST00000477890 IGSF21Q96ID5 467 aa13.17□□□□□ -0.3
CPSF7-211ENST00000477890 RIPOR3Q96MK2 946 aa13.17□□□□□ -0.3
CPSF7-211ENST00000477890 SLKQ9H2G2 1235 aaPredicted RBP13.17□□□□□ -0.3
CPSF7-211ENST00000477890 NRDE2Q9H7Z3 1164 aa13.17□□□□□ -0.3
CPSF7-211ENST00000477890 CYP26B1Q9NR63 512 aa13.17□□□□□ -0.3
CPSF7-211ENST00000477890 KCNJ14Q9UNX9 436 aa13.17□□□□□ -0.3
CPSF7-211ENST00000477890 CCDC194A0A1B0GVG4 234 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 EPB41L2O43491 1005 aaKnown RBP13.16□□□□□ -0.3
CPSF7-211ENST00000477890 ZNF623O75123 536 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 OFD1O75665 1012 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 PDGFBP01127 241 aaPredicted RBP13.16□□□□□ -0.3
CPSF7-211ENST00000477890 GALTP07902 379 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 CTSAP10619 480 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 EPCAMP16422 314 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 AVPR2P30518 371 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 MTHFRP42898 656 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 QARSP47897 775 aaKnown RBP13.16□□□□□ -0.3
CPSF7-211ENST00000477890 POLGP54098 1239 aaPredicted RBP13.16□□□□□ -0.3
CPSF7-211ENST00000477890 NPEPPSP55786 919 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 PPP2R5CQ13362 524 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 MTMR3Q13615 1198 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 GIT2Q14161 759 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 KANK3Q6NY19 840 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 FAM177A1Q8N128 213 aaPredicted RBP13.16□□□□□ -0.3
CPSF7-211ENST00000477890 BCL7CQ8WUZ0 217 aaPredicted RBP13.16□□□□□ -0.3
CPSF7-211ENST00000477890 SLC7A3Q8WY07 619 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 PGBD4Q96DM1 585 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 CEP170P1Q96L14 293 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 IFT122Q9HBG6 1241 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 AGPAT5Q9NUQ2 364 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 DZANK1Q9NVP4 752 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 DNAJB4Q9UDY4 337 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 VAV3Q9UKW4 847 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 SORCS3Q9UPU3 1222 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 COL4A3BPQ9Y5P4 624 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 IRAK3Q9Y616 596 aa13.16□□□□□ -0.3
CPSF7-211ENST00000477890 DKC1O60832 514 aaKnown RBP eCLIP13.15□□□□□ -0.3
CPSF7-211ENST00000477890 SRGAP2CP0DJJ0 459 aa13.15□□□□□ -0.3
CPSF7-211ENST00000477890 SLC11A1P49279 550 aa13.15□□□□□ -0.3
CPSF7-211ENST00000477890 ATAT1Q5SQI0 421 aa13.15□□□□□ -0.3
CPSF7-211ENST00000477890 KIAA1841Q6NSI8 718 aa13.15□□□□□ -0.3
CPSF7-211ENST00000477890 NEK8Q86SG6 692 aa13.15□□□□□ -0.3
CPSF7-211ENST00000477890 ZNF280BQ86YH2 543 aa13.15□□□□□ -0.3
CPSF7-211ENST00000477890 ZNF579Q8NAF0 562 aaKnown RBP13.15□□□□□ -0.3
CPSF7-211ENST00000477890 TDRD5Q8NAT2 981 aaKnown RBP13.15□□□□□ -0.3
CPSF7-211ENST00000477890 URGCPQ8TCY9 931 aa13.15□□□□□ -0.3
CPSF7-211ENST00000477890 TMEM143Q96AN5 459 aa13.15□□□□□ -0.3
CPSF7-211ENST00000477890 FAM20AQ96MK3 541 aa13.15□□□□□ -0.3
CPSF7-211ENST00000477890 TM6SF1Q9BZW5 370 aa13.15□□□□□ -0.3
CPSF7-211ENST00000477890 KCNMB3Q9NPA1 279 aa13.15□□□□□ -0.3
CPSF7-211ENST00000477890 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
CPSF7-211ENST00000477890 PDRG1Q9NUG6 133 aa13.15□□□□□ -0.3
CPSF7-211ENST00000477890 WRAP73Q9P2S5 460 aaPredicted RBP13.15□□□□□ -0.3
CPSF7-211ENST00000477890 DBR1Q9UK59 544 aaKnown RBP13.15□□□□□ -0.3
CPSF7-211ENST00000477890 PCDHB2Q9Y5E7 798 aa13.15□□□□□ -0.3
CPSF7-211ENST00000477890 ARID2Q68CP9 1835 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 SPDYE4A6NLX3 237 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 MARCH6O60337 910 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 B4GALT3O60512 393 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 CCNT1O60563 726 aaKnown RBP13.14□□□□□ -0.31
CPSF7-211ENST00000477890 CDKL5O76039 1030 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 BRD1O95696 1058 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 SSBP05455 408 aaKnown RBP eCLIP13.14□□□□□ -0.31
CPSF7-211ENST00000477890 P4HBP07237 508 aaKnown RBP13.14□□□□□ -0.31
CPSF7-211ENST00000477890 ASGR2P07307 311 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 GCFC2P16383 781 aaKnown RBP13.14□□□□□ -0.31
CPSF7-211ENST00000477890 AGMOQ6ZNB7 445 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 SRGAP1Q7Z6B7 1085 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 CABP7Q86V35 215 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 EXOC8Q8IYI6 725 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 UBALD2Q8IYN6 164 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 SLC22A17Q8WUG5 538 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 PRPF31Q8WWY3 499 aaKnown RBP13.14□□□□□ -0.31
CPSF7-211ENST00000477890 PSPC1Q8WXF1 523 aaKnown RBP13.14□□□□□ -0.31
CPSF7-211ENST00000477890 FAM193BQ96PV7 902 aaPredicted RBP13.14□□□□□ -0.31
CPSF7-211ENST00000477890 PHF20Q9BVI0 1012 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms