RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 RTN1Q16799 776 aa22.85■■□□□ 1.25
PDLIM1-202ENST00000477757 TWF2Q6IBS0 349 aaKnown RBP22.85■■□□□ 1.25
PDLIM1-202ENST00000477757 RSAD2Q8WXG1 361 aa22.85■■□□□ 1.25
PDLIM1-202ENST00000477757 RIN2Q8WYP3 895 aaPredicted RBP22.85■■□□□ 1.25
PDLIM1-202ENST00000477757 RHOBTB2Q9BYZ6 727 aa22.85■■□□□ 1.25
PDLIM1-202ENST00000477757 GCOM2Q9BZD3 368 aaPredicted RBP22.85■■□□□ 1.25
PDLIM1-202ENST00000477757 DLL3Q9NYJ7 618 aa22.85■■□□□ 1.25
PDLIM1-202ENST00000477757 EPS15L1Q9UBC2 864 aa22.85■■□□□ 1.25
PDLIM1-202ENST00000477757 FANCMQ8IYD8 2048 aa22.84■■□□□ 1.25
PDLIM1-202ENST00000477757 LILRB3O75022 631 aa22.84■■□□□ 1.25
PDLIM1-202ENST00000477757 RAB27AP51159 221 aa22.84■■□□□ 1.25
PDLIM1-202ENST00000477757 DRP2Q13474 957 aa22.84■■□□□ 1.25
PDLIM1-202ENST00000477757 UGCGQ16739 394 aa22.84■■□□□ 1.25
PDLIM1-202ENST00000477757 LONRF3Q496Y0 759 aa22.84■■□□□ 1.25
PDLIM1-202ENST00000477757 PRR16Q569H4 304 aa22.84■■□□□ 1.25
PDLIM1-202ENST00000477757 LSG1Q9H089 658 aaKnown RBP22.84■■□□□ 1.25
PDLIM1-202ENST00000477757 GBP3Q9H0R5 595 aa22.84■■□□□ 1.25
PDLIM1-202ENST00000477757 WDR6Q9NNW5 1121 aaKnown RBP22.84■■□□□ 1.25
PDLIM1-202ENST00000477757 MAN1C1Q9NR34 630 aa22.84■■□□□ 1.25
PDLIM1-202ENST00000477757 FAM105AQ9NUU6 356 aa22.84■■□□□ 1.25
PDLIM1-202ENST00000477757 CA14Q9ULX7 337 aa22.84■■□□□ 1.25
PDLIM1-202ENST00000477757 PIN4Q9Y237 131 aaKnown RBP22.84■■□□□ 1.25
PDLIM1-202ENST00000477757 CLUHO75153 1309 aa22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 ZNF623O75123 536 aa22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 OFD1O75665 1012 aa22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 SSBP05455 408 aaKnown RBP eCLIP22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 SRFP11831 508 aa22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 CDC42EP1Q00587 391 aa22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 TARBP2Q15633 366 aaKnown RBP22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 CYP26C1Q6V0L0 522 aa22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 EXOC6Q8TAG9 804 aa22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 RUBCNQ92622 972 aa22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 STAMQ92783 540 aa22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 LENG9Q96B70 501 aa22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 HINFPQ9BQA5 517 aa22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 DISC1Q9NRI5 854 aa22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 MRPL17Q9NRX2 175 aaKnown RBP22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 DLGAP2Q9P1A6 1054 aa22.83■■□□□ 1.25
PDLIM1-202ENST00000477757 ESYT2A0FGR8 921 aa22.82■■□□□ 1.24
PDLIM1-202ENST00000477757 GBP2P32456 591 aaPredicted RBP22.82■■□□□ 1.24
PDLIM1-202ENST00000477757 CREB3L3Q68CJ9 461 aa22.82■■□□□ 1.24
PDLIM1-202ENST00000477757 PHLDB3Q6NSJ2 640 aa22.82■■□□□ 1.24
PDLIM1-202ENST00000477757 ZNF280BQ86YH2 543 aa22.82■■□□□ 1.24
PDLIM1-202ENST00000477757 REXO1Q8N1G1 1221 aaKnown RBP22.82■■□□□ 1.24
PDLIM1-202ENST00000477757 SLC44A3Q8N4M1 653 aa22.82■■□□□ 1.24
PDLIM1-202ENST00000477757 NXPE3Q969Y0 559 aa22.82■■□□□ 1.24
PDLIM1-202ENST00000477757 GPR179Q6PRD1 2367 aa22.82■■□□□ 1.24
PDLIM1-202ENST00000477757 A0A087WZ62 844 aa22.81■■□□□ 1.24
PDLIM1-202ENST00000477757 ADAMTS3O15072 1205 aa22.81■■□□□ 1.24
PDLIM1-202ENST00000477757 ZBTB43O43298 467 aa22.81■■□□□ 1.24
PDLIM1-202ENST00000477757 SP9P0CG40 484 aa22.81■■□□□ 1.24
PDLIM1-202ENST00000477757 CIITAP33076 1130 aa22.81■■□□□ 1.24
PDLIM1-202ENST00000477757 ZNF410Q86VK4 478 aa22.81■■□□□ 1.24
PDLIM1-202ENST00000477757 URGCPQ8TCY9 931 aa22.81■■□□□ 1.24
PDLIM1-202ENST00000477757 FDXACB1Q9BRP7 624 aaPredicted RBP22.81■■□□□ 1.24
PDLIM1-202ENST00000477757 TPRP12270 2363 aaKnown RBP22.81■■□□□ 1.24
PDLIM1-202ENST00000477757 ACACBO00763 2458 aa22.8■■□□□ 1.24
PDLIM1-202ENST00000477757 URODP06132 367 aa22.8■■□□□ 1.24
PDLIM1-202ENST00000477757 NECTIN1Q15223 517 aa22.8■■□□□ 1.24
PDLIM1-202ENST00000477757 PFKFB3Q16875 520 aaPredicted RBP22.8■■□□□ 1.24
PDLIM1-202ENST00000477757 SPECC1Q5M775 1068 aa22.8■■□□□ 1.24
PDLIM1-202ENST00000477757 ELMSAN1Q6PJG2 1045 aa22.8■■□□□ 1.24
PDLIM1-202ENST00000477757 MYADMQ96S97 322 aa22.8■■□□□ 1.24
PDLIM1-202ENST00000477757 TMEM175Q9BSA9 504 aa22.8■■□□□ 1.24
PDLIM1-202ENST00000477757 INO80BQ9C086 356 aaPredicted RBP22.8■■□□□ 1.24
PDLIM1-202ENST00000477757 ZMYND12Q9H0C1 365 aa22.8■■□□□ 1.24
PDLIM1-202ENST00000477757 ARHGEF3Q9NR81 526 aa22.8■■□□□ 1.24
PDLIM1-202ENST00000477757 BRPF3Q9ULD4 1205 aa22.8■■□□□ 1.24
PDLIM1-202ENST00000477757 DOCK8Q8NF50 2099 aa22.8■■□□□ 1.24
PDLIM1-202ENST00000477757 IGKV6-21A0A0C4DH24 114 aa22.79■■□□□ 1.24
PDLIM1-202ENST00000477757 CCDC195A0A1B0GUA6 201 aa22.79■■□□□ 1.24
PDLIM1-202ENST00000477757 PAPLNO95428 1278 aa22.79■■□□□ 1.24
PDLIM1-202ENST00000477757 ADH1AP07327 375 aa22.79■■□□□ 1.24
PDLIM1-202ENST00000477757 DCNP07585 359 aaKnown RBP22.79■■□□□ 1.24
PDLIM1-202ENST00000477757 SFNP31947 248 aa22.79■■□□□ 1.24
PDLIM1-202ENST00000477757 JAK3P52333 1124 aa22.79■■□□□ 1.24
PDLIM1-202ENST00000477757 C1orf210Q8IVY1 113 aa22.79■■□□□ 1.24
PDLIM1-202ENST00000477757 GPR152Q8TDT2 470 aa22.79■■□□□ 1.24
PDLIM1-202ENST00000477757 PGBD4Q96DM1 585 aa22.79■■□□□ 1.24
PDLIM1-202ENST00000477757 CEP89Q96ST8 783 aa22.79■■□□□ 1.24
PDLIM1-202ENST00000477757 HERC2P3Q9BVR0 1158 aa22.79■■□□□ 1.24
PDLIM1-202ENST00000477757 FAM217BQ9NTX9 383 aaPredicted RBP22.79■■□□□ 1.24
PDLIM1-202ENST00000477757 DPP7Q9UHL4 492 aa22.79■■□□□ 1.24
PDLIM1-202ENST00000477757 SIT1Q9Y3P8 196 aa22.79■■□□□ 1.24
PDLIM1-202ENST00000477757 GOLGA8AA7E2F4 631 aa22.78■■□□□ 1.24
PDLIM1-202ENST00000477757 GOLGA8BA8MQT2 603 aa22.78■■□□□ 1.24
PDLIM1-202ENST00000477757 INPPL1O15357 1258 aa22.78■■□□□ 1.24
PDLIM1-202ENST00000477757 DDHD2O94830 711 aa22.78■■□□□ 1.24
PDLIM1-202ENST00000477757 GLUD1P00367 558 aa22.78■■□□□ 1.24
PDLIM1-202ENST00000477757 SOD2P04179 222 aa22.78■■□□□ 1.24
PDLIM1-202ENST00000477757 DNM2P50570 870 aa22.78■■□□□ 1.24
PDLIM1-202ENST00000477757 AGMOQ6ZNB7 445 aa22.78■■□□□ 1.24
PDLIM1-202ENST00000477757 CATSPER4Q7RTX7 472 aa22.78■■□□□ 1.24
PDLIM1-202ENST00000477757 RPS6KC1Q96S38 1066 aa22.78■■□□□ 1.24
PDLIM1-202ENST00000477757 RIT2Q99578 217 aa22.78■■□□□ 1.24
PDLIM1-202ENST00000477757 NIFKQ9BYG3 293 aaKnown RBP22.78■■□□□ 1.24
PDLIM1-202ENST00000477757 C6orf50Q9HD87 102 aa22.78■■□□□ 1.24
PDLIM1-202ENST00000477757 SEPT9Q9UHD8 586 aaPredicted RBP22.78■■□□□ 1.24
PDLIM1-202ENST00000477757 PCDHB2Q9Y5E7 798 aa22.78■■□□□ 1.24
PDLIM1-202ENST00000477757 CNTNAP2Q9UHC6 1331 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms