RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 SYCE3A1L190 88 aa17.83■□□□□ 0.44
VHL-203ENST00000477538 MYBP10242 640 aa17.83■□□□□ 0.44
VHL-203ENST00000477538 CASP5P51878 434 aa17.83■□□□□ 0.44
VHL-203ENST00000477538 CRYBB1P53674 252 aaPredicted RBP17.83■□□□□ 0.44
VHL-203ENST00000477538 PTENP60484 403 aa17.83■□□□□ 0.44
VHL-203ENST00000477538 MGAT3Q09327 533 aa17.83■□□□□ 0.44
VHL-203ENST00000477538 ALCAMQ13740 583 aa17.83■□□□□ 0.44
VHL-203ENST00000477538 ZNF618Q5T7W0 954 aa17.83■□□□□ 0.44
VHL-203ENST00000477538 SASS6Q6UVJ0 657 aa17.83■□□□□ 0.44
VHL-203ENST00000477538 STXBP4Q6ZWJ1 553 aa17.83■□□□□ 0.44
VHL-203ENST00000477538 ZNF720Q7Z2F6 126 aa17.83■□□□□ 0.44
VHL-203ENST00000477538 IFNLR1Q8IU57 520 aaPredicted RBP17.83■□□□□ 0.44
VHL-203ENST00000477538 TMEM161BQ8NDZ6 487 aa17.83■□□□□ 0.44
VHL-203ENST00000477538 GLIS3Q8NEA6 775 aa17.83■□□□□ 0.44
VHL-203ENST00000477538 NOC4LQ9BVI4 516 aaKnown RBP17.83■□□□□ 0.44
VHL-203ENST00000477538 NFKBIZQ9BYH8 718 aa17.83■□□□□ 0.44
VHL-203ENST00000477538 GCOM2Q9BZD3 368 aaPredicted RBP17.83■□□□□ 0.44
VHL-203ENST00000477538 ST6GALNAC4Q9H4F1 302 aa17.83■□□□□ 0.44
VHL-203ENST00000477538 CDHR5Q9HBB8 845 aa17.83■□□□□ 0.44
VHL-203ENST00000477538 DENND3A2RUS2 1198 aa17.82■□□□□ 0.44
VHL-203ENST00000477538 PITPNM1O00562 1244 aa17.82■□□□□ 0.44
VHL-203ENST00000477538 PPP1R37O75864 691 aa17.82■□□□□ 0.44
VHL-203ENST00000477538 CHRNA1P02708 482 aa17.82■□□□□ 0.44
VHL-203ENST00000477538 BMP6P22004 513 aa17.82■□□□□ 0.44
VHL-203ENST00000477538 SCP2P22307 547 aa17.82■□□□□ 0.44
VHL-203ENST00000477538 EFNA5P52803 228 aa17.82■□□□□ 0.44
VHL-203ENST00000477538 ZC2HC1CQ53FD0 456 aaPredicted RBP17.82■□□□□ 0.44
VHL-203ENST00000477538 FAM26DQ5JW98 314 aa17.82■□□□□ 0.44
VHL-203ENST00000477538 EPM2AIP1Q7L775 607 aaPredicted RBP17.82■□□□□ 0.44
VHL-203ENST00000477538 SRGAP1Q7Z6B7 1085 aa17.82■□□□□ 0.44
VHL-203ENST00000477538 SMYD4Q8IYR2 804 aaPredicted RBP17.82■□□□□ 0.44
VHL-203ENST00000477538 HVCN1Q96D96 273 aa17.82■□□□□ 0.44
VHL-203ENST00000477538 GZF1Q9H116 711 aaPredicted RBP17.82■□□□□ 0.44
VHL-203ENST00000477538 HIPK3Q9H422 1215 aa17.82■□□□□ 0.44
VHL-203ENST00000477538 TMEM39AQ9NV64 488 aa17.82■□□□□ 0.44
VHL-203ENST00000477538 TBX21Q9UL17 535 aa17.82■□□□□ 0.44
VHL-203ENST00000477538 PCDHB13Q9Y5F0 798 aa17.82■□□□□ 0.44
VHL-203ENST00000477538 UBE4BO95155 1302 aa17.81■□□□□ 0.44
VHL-203ENST00000477538 INO80B-WBP1J3KQ70 363 aa17.81■□□□□ 0.44
VHL-203ENST00000477538 K7ERI5 159 aa17.81■□□□□ 0.44
VHL-203ENST00000477538 EIF3DO15371 548 aaKnown RBP eCLIP17.81■□□□□ 0.44
VHL-203ENST00000477538 DARSP14868 501 aaKnown RBP17.81■□□□□ 0.44
VHL-203ENST00000477538 SELPP16109 830 aa17.81■□□□□ 0.44
VHL-203ENST00000477538 ABCD1P33897 745 aa17.81■□□□□ 0.44
VHL-203ENST00000477538 NLRP12P59046 1061 aa17.81■□□□□ 0.44
VHL-203ENST00000477538 GTF2BQ00403 316 aa17.81■□□□□ 0.44
VHL-203ENST00000477538 MBTD1Q05BQ5 628 aa17.81■□□□□ 0.44
VHL-203ENST00000477538 LRRC8DQ7L1W4 858 aa17.81■□□□□ 0.44
VHL-203ENST00000477538 KCNN1Q92952 543 aa17.81■□□□□ 0.44
VHL-203ENST00000477538 HTATIP2Q9BUP3 242 aa17.81■□□□□ 0.44
VHL-203ENST00000477538 STRA6Q9BX79 667 aa17.81■□□□□ 0.44
VHL-203ENST00000477538 INO80BQ9C086 356 aaPredicted RBP17.81■□□□□ 0.44
VHL-203ENST00000477538 CCDC113Q9H0I3 377 aa17.81■□□□□ 0.44
VHL-203ENST00000477538 TMEM134Q9H6X4 195 aa17.81■□□□□ 0.44
VHL-203ENST00000477538 MINDY3Q9H8M7 445 aa17.81■□□□□ 0.44
VHL-203ENST00000477538 UMODL1Q5DID0 1318 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 CSDE1O75534 798 aaKnown RBP17.8■□□□□ 0.44
VHL-203ENST00000477538 PRPF6O94906 941 aaKnown RBP17.8■□□□□ 0.44
VHL-203ENST00000477538 PRKCBP05771 671 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 EIF4BP23588 611 aaKnown RBP17.8■□□□□ 0.44
VHL-203ENST00000477538 TYRO3Q06418 890 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 STRN3Q13033 797 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 STX1AQ16623 288 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 MAPK6Q16659 721 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 L1TD1Q5T7N2 865 aaKnown RBP17.8■□□□□ 0.44
VHL-203ENST00000477538 TRAF7Q6Q0C0 670 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 TAS1R3Q7RTX0 852 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 MYOCDQ8IZQ8 938 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 ZNF507Q8TCN5 953 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 SCFD1Q8WVM8 642 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 TMEM40Q8WWA1 233 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 PPP1R12CQ9BZL4 782 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 PRDM5Q9NQX1 630 aaPredicted RBP17.8■□□□□ 0.44
VHL-203ENST00000477538 TBX20Q9UMR3 447 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 MAPK8IP1Q9UQF2 711 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 ANK1P16157 1881 aa17.8■□□□□ 0.44
VHL-203ENST00000477538 KIF20AO95235 890 aa17.79■□□□□ 0.44
VHL-203ENST00000477538 CCDC192P0DO97 292 aa17.79■□□□□ 0.44
VHL-203ENST00000477538 PRCPP42785 496 aa17.79■□□□□ 0.44
VHL-203ENST00000477538 STIM1Q13586 685 aa17.79■□□□□ 0.44
VHL-203ENST00000477538 BMT2Q1RMZ1 405 aa17.79■□□□□ 0.44
VHL-203ENST00000477538 DPCR1Q3MIW9 517 aa17.79■□□□□ 0.44
VHL-203ENST00000477538 COBLL1Q53SF7 1204 aa17.79■□□□□ 0.44
VHL-203ENST00000477538 FBXO47Q5MNV8 452 aa17.79■□□□□ 0.44
VHL-203ENST00000477538 GUF1Q8N442 669 aaKnown RBP17.79■□□□□ 0.44
VHL-203ENST00000477538 ACCSQ96QU6 501 aa17.79■□□□□ 0.44
VHL-203ENST00000477538 FZD8Q9H461 694 aa17.79■□□□□ 0.44
VHL-203ENST00000477538 PRMT7Q9NVM4 692 aaPredicted RBP17.79■□□□□ 0.44
VHL-203ENST00000477538 KIAA0355O15063 1070 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 ERLIN2O94905 339 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 IQCF3P0C7M6 154 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 GHRP10912 638 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 CD44P16070 742 aaKnown RBP17.78■□□□□ 0.44
VHL-203ENST00000477538 FGFR4P22455 802 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 SFPQP23246 707 aaKnown RBP eCLIP17.78■□□□□ 0.44
VHL-203ENST00000477538 CYP2C18P33260 490 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 PPP1R2P41236 205 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 KCNA1Q09470 495 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 FAM187BQ17R55 369 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 PPP4R3CPQ6ZMV5 832 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms