RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 FAM105AQ9NUU6 356 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 TPCN1Q9ULQ1 816 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 PPME1Q9Y570 386 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 COL4A3BPQ9Y5P4 624 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 HCFC2Q9Y5Z7 792 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 CARNS1A5YM72 827 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 MEIS3P2A8K0S8 358 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 CCNT1O60563 726 aaKnown RBP12.72□□□□□ -0.37
HDLBP-236ENST00000477477 CLASP2O75122 1294 aaKnown RBP12.72□□□□□ -0.37
HDLBP-236ENST00000477477 ZNF623O75123 536 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 RFC5P40937 340 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 POLGP54098 1239 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-236ENST00000477477 NHLH1Q02575 133 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 LONRF3Q496Y0 759 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 TPRNQ4KMQ1 711 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 NOMO2Q5JPE7 1267 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 PIK3AP1Q6ZUJ8 805 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 POTEDQ86YR6 584 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 C4orf19Q8IY42 314 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 EXOC8Q8IYI6 725 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
HDLBP-236ENST00000477477 OXER1Q8TDS5 423 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 PSPC1Q8WXF1 523 aaKnown RBP12.72□□□□□ -0.37
HDLBP-236ENST00000477477 HAS1Q92839 578 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 LXNQ9BS40 222 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 ZBP1Q9H171 429 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 DHX33Q9H6R0 707 aaKnown RBP12.72□□□□□ -0.37
HDLBP-236ENST00000477477 NRDE2Q9H7Z3 1164 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 TBC1D13Q9NVG8 400 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 INPP5FQ9Y2H2 1132 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 ZNF318Q5VUA4 2279 aa12.72□□□□□ -0.37
HDLBP-236ENST00000477477 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-236ENST00000477477 DTNBO60941 627 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 OFD1O75665 1012 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 CTDNEP1O95476 244 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 CXCL14O95715 111 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 GALTP07902 379 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 CA8P35219 290 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 SPIRE1Q08AE8 756 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 BMS1Q14692 1282 aaKnown RBP12.71□□□□□ -0.37
HDLBP-236ENST00000477477 EPHA7Q15375 998 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 PTPN21Q16825 1174 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 EARS2Q5JPH6 523 aaKnown RBP12.71□□□□□ -0.37
HDLBP-236ENST00000477477 SRGAP1Q7Z6B7 1085 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 VPS52Q8N1B4 723 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 BCL7CQ8WUZ0 217 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-236ENST00000477477 WASF1Q92558 559 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 TMEM143Q96AN5 459 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 PGBD4Q96DM1 585 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 IGSF21Q96ID5 467 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 BMP2KQ9NSY1 1161 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-236ENST00000477477 ORC3Q9UBD5 711 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-236ENST00000477477 CDH22Q9UJ99 828 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 IRAK3Q9Y616 596 aa12.71□□□□□ -0.37
HDLBP-236ENST00000477477 WDFY4Q6ZS81 3184 aa12.71□□□□□ -0.38
HDLBP-236ENST00000477477 FAM205CA6NFA0 338 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 GAS2O43903 313 aaKnown RBP12.7□□□□□ -0.38
HDLBP-236ENST00000477477 MARCH6O60337 910 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 CTSAP10619 480 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 SP100P23497 879 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-236ENST00000477477 YWHABP31946 246 aaKnown RBP12.7□□□□□ -0.38
HDLBP-236ENST00000477477 SLC11A1P49279 550 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 AK2P54819 239 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 ANAPC15P60006 121 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 RNASELQ05823 741 aaKnown RBP12.7□□□□□ -0.38
HDLBP-236ENST00000477477 ITIH3Q06033 890 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 SIGLEC14Q08ET2 396 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 LAMTOR4Q0VGL1 99 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 EMC2Q15006 297 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 ANKRD1Q15327 319 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 NCAPH2Q6IBW4 605 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 CES5AQ6NT32 575 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 AGMOQ6ZNB7 445 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 DDX53Q86TM3 631 aaKnown RBP12.7□□□□□ -0.38
HDLBP-236ENST00000477477 ALYREFQ86V81 257 aaKnown RBP12.7□□□□□ -0.38
HDLBP-236ENST00000477477 SLFN12Q8IYM2 578 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 PRPF31Q8WWY3 499 aaKnown RBP12.7□□□□□ -0.38
HDLBP-236ENST00000477477 AUTS2Q8WXX7 1259 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 PBXIP1Q96AQ6 731 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 ASIC4Q96FT7 647 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 DYDC2Q96IM9 177 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 NECTIN4Q96NY8 510 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 ADAM7Q9H2U9 754 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 POMKQ9H5K3 350 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 ZSWIM4Q9H7M6 989 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 MINDY3Q9H8M7 445 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 RGL1Q9NZL6 768 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 DNAJB4Q9UDY4 337 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 PCDHB2Q9Y5E7 798 aa12.7□□□□□ -0.38
HDLBP-236ENST00000477477 B4GALT3O60512 393 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 SRGAP2CP0DJJ0 459 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 FDPSP14324 419 aaKnown RBP12.69□□□□□ -0.38
HDLBP-236ENST00000477477 HOXA11P31270 313 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-236ENST00000477477 KRT2P35908 639 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 CYP4A11Q02928 519 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 NR5A1Q13285 461 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 GIT2Q14161 759 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 CTTNQ14247 550 aaKnown RBP12.69□□□□□ -0.38
HDLBP-236ENST00000477477 XKR9Q5GH70 373 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 UBXN11Q5T124 520 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms