RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 NTPCRQ9BSD7 190 aaKnown RBP13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 TMEM117Q9H0C3 514 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 LMAN2LQ9H0V9 348 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 UBN1Q9NPG3 1134 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 FBXO2Q9UK22 296 aaPredicted RBP13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 CNTNAP2Q9UHC6 1331 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 GTPBP6O43824 516 aaPredicted RBP13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 LINC00271P0C7V0 271 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 HOXA11P31270 313 aaPredicted RBP13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 BMPR1AP36894 532 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 TXLNAP40222 546 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 NUCB2P80303 420 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 MBTD1Q05BQ5 628 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 RINT1Q6NUQ1 792 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 FAM117BQ6P1L5 589 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 NOTUMQ6P988 496 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 TMCO2Q7Z6W1 182 aaPredicted RBP13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 TMEM192Q8IY95 271 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 KRI1Q8N9T8 703 aaKnown RBP13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 FAM161BQ96MY7 647 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 PNMA5Q96PV4 448 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 USP28Q96RU2 1077 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 PPP1R16BQ96T49 567 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 C11orf84Q9BUA3 381 aaPredicted RBP13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 MRPL9Q9BYD2 267 aaKnown RBP13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 FZD8Q9H461 694 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 PRDM12Q9H4Q4 367 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 MINDY3Q9H8M7 445 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 AAASQ9NRG9 546 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 STK17AQ9UEE5 414 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 CFAP45Q9UL16 551 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 ODF2LQ9ULJ1 636 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 PIN4Q9Y237 131 aaKnown RBP13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 CLIC4Q9Y696 253 aa13.68□□□□□ -0.22
CLCNKA-205ENST00000477360 A0A1B0GUA9 196 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 PP2D1A8MPX8 630 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 E9PMD0 336 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 H0YCG3 227 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 H3BNC9 293 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 INPPL1O15357 1258 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 F13A1P00488 732 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 CDC25AP30304 524 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 SLC12A3P55017 1021 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 GRB10Q13322 594 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 AMHR2Q16671 573 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 EPC2Q52LR7 807 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 FAM102BQ5T8I3 360 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 TWF2Q6IBS0 349 aaKnown RBP13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 HACE1Q8IYU2 909 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 LINC00301Q8NCQ3 95 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 FBXO22Q8NEZ5 403 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 KCNG4Q8TDN1 519 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 SPIRE2Q8WWL2 714 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 MYLIPQ8WY64 445 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 FAM105AQ9NUU6 356 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 CCDC39Q9UFE4 941 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 ZDHHC9Q9Y397 364 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 ATP6V1DQ9Y5K8 247 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 GBF1Q92538 1859 aa13.67□□□□□ -0.22
CLCNKA-205ENST00000477360 INO80B-WBP1J3KQ70 363 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 ACKR2O00590 384 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 TSPAN1O60635 241 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 LPXNO60711 386 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 ARHGEF15O94989 841 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 PLA2G4BP0C869 781 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 UBE3AQ05086 875 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 PKP1Q13835 747 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 MAPK6Q16659 721 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 PTPROQ16827 1216 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 KCNK18Q7Z418 384 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 APBB1IPQ7Z5R6 666 aaPredicted RBP13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 ABI1Q8IZP0 508 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 LRRC43Q8N309 656 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 SLC17A8Q8NDX2 589 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 ARNTL2Q8WYA1 636 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 CSRNP2Q9H175 543 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 TMEM134Q9H6X4 195 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 KANSL3Q9P2N6 904 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 STK39Q9UEW8 545 aa13.66□□□□□ -0.22
CLCNKA-205ENST00000477360 TRANK1O15050 2925 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 LRRIQ4A6NIV6 560 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 SPTLC2O15270 562 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 ATF7P17544 494 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 LAG3P18627 525 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 NCLP19338 710 aaKnown RBP13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 PPM1AP35813 382 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 SMTNP53814 917 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 DMP1Q13316 513 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 ADGRE1Q14246 886 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 STK38Q15208 465 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 SLC27A1Q6PCB7 646 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 GLB1LQ6UWU2 654 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 CCDC73Q6ZRK6 1079 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 DAW1Q8N136 415 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 MAFAQ8NHW3 353 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 DEPTORQ8TB45 409 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 MRPL38Q96DV4 380 aaKnown RBP13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 ZNF668Q96K58 619 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 C17orf80Q9BSJ5 609 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 CCDC113Q9H0I3 377 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms