RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 PCDHA7Q9UN72 937 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 PCDHA12Q9UN75 941 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 CEP250Q9BV73 2442 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 DHX15O43143 795 aaKnown RBP12.9□□□□□ -0.34
LSM2-212ENST00000477182 CUTAO60888 179 aa12.9□□□□□ -0.34
LSM2-212ENST00000477182 PRPF40AO75400 957 aaKnown RBP12.9□□□□□ -0.34
LSM2-212ENST00000477182 RPLP2P05387 115 aaKnown RBP12.9□□□□□ -0.34
LSM2-212ENST00000477182 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
LSM2-212ENST00000477182 ITIH3Q06033 890 aa12.9□□□□□ -0.34
LSM2-212ENST00000477182 MGAT3Q09327 533 aa12.9□□□□□ -0.34
LSM2-212ENST00000477182 TMEM266Q2M3C6 531 aa12.9□□□□□ -0.34
LSM2-212ENST00000477182 FBXO47Q5MNV8 452 aa12.9□□□□□ -0.34
LSM2-212ENST00000477182 AXDND1Q5T1B0 1012 aaPredicted RBP12.9□□□□□ -0.34
LSM2-212ENST00000477182 SPOUT1Q5T280 376 aaKnown RBP12.9□□□□□ -0.34
LSM2-212ENST00000477182 CWF19L1Q69YN2 538 aaKnown RBP12.9□□□□□ -0.34
LSM2-212ENST00000477182 ZDHHC14Q8IZN3 488 aa12.9□□□□□ -0.34
LSM2-212ENST00000477182 CRIPAKQ8N1N5 446 aa12.9□□□□□ -0.34
LSM2-212ENST00000477182 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
LSM2-212ENST00000477182 TMEM87AQ8NBN3 555 aa12.9□□□□□ -0.34
LSM2-212ENST00000477182 SDF4Q9BRK5 362 aa12.9□□□□□ -0.34
LSM2-212ENST00000477182 CSRNP2Q9H175 543 aa12.9□□□□□ -0.34
LSM2-212ENST00000477182 TBC1D22BQ9NU19 505 aa12.9□□□□□ -0.34
LSM2-212ENST00000477182 RNF216Q9NWF9 866 aaPredicted RBP12.9□□□□□ -0.34
LSM2-212ENST00000477182 VAV3Q9UKW4 847 aa12.9□□□□□ -0.34
LSM2-212ENST00000477182 LRFN2Q9ULH4 789 aa12.9□□□□□ -0.34
LSM2-212ENST00000477182 FRYLO94915 3013 aa12.9□□□□□ -0.34
LSM2-212ENST00000477182 NFASCO94856 1347 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 POTEMA6NI47 508 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 GOLGA6L22H0YM25 854 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 FSCN2O14926 492 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 CHMP2AO43633 222 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 GADD45BO75293 160 aaPredicted RBP12.89□□□□□ -0.35
LSM2-212ENST00000477182 MTHFRP42898 656 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 SP4Q02446 784 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 SPIRE1Q08AE8 756 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 NEDD9Q14511 834 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 ST3GAL2Q16842 350 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 SPECC1Q5M775 1068 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 NCAPH2Q6IBW4 605 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 ZC3H14Q6PJT7 736 aaKnown RBP12.89□□□□□ -0.35
LSM2-212ENST00000477182 CYFIP1Q7L576 1253 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 TDRD5Q8NAT2 981 aaKnown RBP12.89□□□□□ -0.35
LSM2-212ENST00000477182 RUBCNQ92622 972 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 CASP10Q92851 521 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 SENP7Q9BQF6 1050 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 APOL5Q9BWW9 433 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 UNC45AQ9H3U1 944 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 POMKQ9H5K3 350 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 LZTS1Q9Y250 596 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 TELO2Q9Y4R8 837 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 SQORQ9Y6N5 450 aa12.89□□□□□ -0.35
LSM2-212ENST00000477182 BAHCC1Q9P281 2608 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 PP2D1A8MPX8 630 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 FGF18O76093 207 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 CCNE2O96020 404 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 MCM4P33991 863 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 LONP1P36776 959 aaKnown RBP12.88□□□□□ -0.35
LSM2-212ENST00000477182 ERVFC1P60507 584 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 PPP2R5CQ13362 524 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 METTL7BQ6UX53 244 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 FAM43BQ6ZT52 329 aaPredicted RBP12.88□□□□□ -0.35
LSM2-212ENST00000477182 USP49Q70CQ1 688 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 THNSL1Q8IYQ7 743 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 IGSF22Q8N9C0 903 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 GIMAP8Q8ND71 665 aaPredicted RBP12.88□□□□□ -0.35
LSM2-212ENST00000477182 LINC01599Q8WXQ3 324 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 RAB34Q9BZG1 259 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 ADAM7Q9H2U9 754 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 SMOC2Q9H3U7 446 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 JPH1Q9HDC5 661 aaPredicted RBP12.88□□□□□ -0.35
LSM2-212ENST00000477182 NGRNQ9NPE2 291 aaKnown RBP12.88□□□□□ -0.35
LSM2-212ENST00000477182 SLC9A2Q9UBY0 812 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 LRWD1Q9UFC0 647 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 TCEAL9Q9UHQ7 104 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 PUF60Q9UHX1 559 aaKnown RBP12.88□□□□□ -0.35
LSM2-212ENST00000477182 USTQ9Y2C2 406 aa12.88□□□□□ -0.35
LSM2-212ENST00000477182 GOLGA6L4A6NEF3 574 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 EML1O00423 815 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 PI15O43692 258 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 ASGR2P07307 311 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 CDC25AP30304 524 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 CD52P31358 61 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 KRT76Q01546 638 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 PDIA5Q14554 519 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 RSPO4Q2I0M5 234 aaPredicted RBP12.87□□□□□ -0.35
LSM2-212ENST00000477182 PLPP4Q5VZY2 271 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 ADALQ6DHV7 355 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 ZNF746Q6NUN9 644 aaPredicted RBP12.87□□□□□ -0.35
LSM2-212ENST00000477182 LLGL2Q6P1M3 1020 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 SHC4Q6S5L8 630 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 B3GNT9Q6UX72 402 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 MIER3Q7Z3K6 550 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 RTN4RL1Q86UN2 441 aaPredicted RBP12.87□□□□□ -0.35
LSM2-212ENST00000477182 ZNF579Q8NAF0 562 aaKnown RBP12.87□□□□□ -0.35
LSM2-212ENST00000477182 EPSTI1Q96J88 318 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 AK8Q96MA6 479 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 LMBRD1Q9NUN5 540 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 LIMD1Q9UGP4 676 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 CDY2AQ9Y6F7 541 aa12.87□□□□□ -0.35
LSM2-212ENST00000477182 LOXHD1Q8IVV2 1947 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms