RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 SF3A1Q15459 793 aaKnown RBP13.63□□□□□ -0.23
PRKD3-209ENST00000477132 CLLU1OSQ5K130 101 aa13.63□□□□□ -0.23
PRKD3-209ENST00000477132 SRGAP1Q7Z6B7 1085 aa13.63□□□□□ -0.23
PRKD3-209ENST00000477132 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
PRKD3-209ENST00000477132 PNMA5Q96PV4 448 aa13.63□□□□□ -0.23
PRKD3-209ENST00000477132 RAB34Q9BZG1 259 aa13.63□□□□□ -0.23
PRKD3-209ENST00000477132 INO80BQ9C086 356 aaPredicted RBP13.63□□□□□ -0.23
PRKD3-209ENST00000477132 BHMT2Q9H2M3 363 aa13.63□□□□□ -0.23
PRKD3-209ENST00000477132 POLD4Q9HCU8 107 aa13.63□□□□□ -0.23
PRKD3-209ENST00000477132 CHST12Q9NRB3 414 aa13.63□□□□□ -0.23
PRKD3-209ENST00000477132 MYH11P35749 1972 aa13.63□□□□□ -0.23
PRKD3-209ENST00000477132 ARHGEF35A5YM69 484 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 GRM6O15303 877 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 TSPAN1O60635 241 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 CYP11B2P19099 503 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 PHKA2P46019 1235 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 MBTD1Q05BQ5 628 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 AMHR2Q16671 573 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 UBXN11Q5T124 520 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 KRT79Q5XKE5 535 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 ARL6IP4Q66PJ3 421 aaKnown RBP13.62□□□□□ -0.23
PRKD3-209ENST00000477132 TWF2Q6IBS0 349 aaKnown RBP13.62□□□□□ -0.23
PRKD3-209ENST00000477132 LRRC55Q6ZSA7 311 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 RNF169Q8NCN4 708 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 LPPQ93052 612 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 CASD1Q96PB1 797 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 TRAIPQ9BWF2 469 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 CWH43Q9H720 699 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 FAM105AQ9NUU6 356 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 DACT1Q9NYF0 836 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 CLIC4Q9Y696 253 aa13.62□□□□□ -0.23
PRKD3-209ENST00000477132 SPTBN5Q9NRC6 3674 aaKnown RBP13.62□□□□□ -0.23
PRKD3-209ENST00000477132 INO80B-WBP1J3KQ70 363 aa13.61□□□□□ -0.23
PRKD3-209ENST00000477132 POU5F1BQ06416 359 aa13.61□□□□□ -0.23
PRKD3-209ENST00000477132 TFDP1Q14186 410 aa13.61□□□□□ -0.23
PRKD3-209ENST00000477132 PTPAQ15257 358 aa13.61□□□□□ -0.23
PRKD3-209ENST00000477132 LONRF3Q496Y0 759 aa13.61□□□□□ -0.23
PRKD3-209ENST00000477132 HYIQ5T013 277 aa13.61□□□□□ -0.23
PRKD3-209ENST00000477132 HSCBQ8IWL3 235 aa13.61□□□□□ -0.23
PRKD3-209ENST00000477132 MCPH1Q8NEM0 835 aa13.61□□□□□ -0.23
PRKD3-209ENST00000477132 HELQQ8TDG4 1101 aa13.61□□□□□ -0.23
PRKD3-209ENST00000477132 LRRC15Q8TF66 581 aa13.61□□□□□ -0.23
PRKD3-209ENST00000477132 PLIN2Q99541 437 aa13.61□□□□□ -0.23
PRKD3-209ENST00000477132 NFKBIZQ9BYH8 718 aa13.61□□□□□ -0.23
PRKD3-209ENST00000477132 TMEM117Q9H0C3 514 aa13.61□□□□□ -0.23
PRKD3-209ENST00000477132 TYW1Q9NV66 732 aaKnown RBP13.61□□□□□ -0.23
PRKD3-209ENST00000477132 LMCD1Q9NZU5 365 aa13.61□□□□□ -0.23
PRKD3-209ENST00000477132 RWDD3Q9Y3V2 267 aa13.61□□□□□ -0.23
PRKD3-209ENST00000477132 MYO7AQ13402 2215 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 LRRIQ4A6NIV6 560 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 B4GALT5O43286 388 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 STX6O43752 255 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 CSPG5O95196 566 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 EYA4O95677 639 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 EDN1P05305 212 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 ITGB1P05556 798 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 RB1P06400 928 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 DNAJB1P25685 340 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 CAMK1Q14012 370 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 ZRSR1Q15695 479 aaKnown RBP13.6□□□□□ -0.23
PRKD3-209ENST00000477132 CDCA2Q69YH5 1023 aaPredicted RBP13.6□□□□□ -0.23
PRKD3-209ENST00000477132 DAW1Q8N136 415 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 KLHL23Q8NBE8 558 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 MRPL38Q96DV4 380 aaKnown RBP13.6□□□□□ -0.23
PRKD3-209ENST00000477132 CPB2Q96IY4 423 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 C11orf84Q9BUA3 381 aaPredicted RBP13.6□□□□□ -0.23
PRKD3-209ENST00000477132 KIFC3Q9BVG8 833 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 RUSC1Q9BVN2 902 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 EIF2AQ9BY44 585 aaKnown RBP13.6□□□□□ -0.23
PRKD3-209ENST00000477132 ALG13Q9NP73 1137 aaKnown RBP13.6□□□□□ -0.23
PRKD3-209ENST00000477132 PLAGL2Q9UPG8 496 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 STK24Q9Y6E0 443 aa13.6□□□□□ -0.23
PRKD3-209ENST00000477132 TDRD15B5MCY1 1934 aaKnown RBP13.6□□□□□ -0.23
PRKD3-209ENST00000477132 TTLL13PA6NNM8 815 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 ZNF623O75123 536 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 ERLIN2O94905 339 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 EOMESO95936 686 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 ARF4P18085 180 aaPredicted RBP13.59□□□□□ -0.23
PRKD3-209ENST00000477132 PBX3P40426 434 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 AFF1P51825 1210 aaKnown RBP13.59□□□□□ -0.23
PRKD3-209ENST00000477132 MAPK7Q13164 816 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 TMEM119Q4V9L6 283 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 CABP7Q86V35 215 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 CDR2LQ86X02 465 aaPredicted RBP13.59□□□□□ -0.23
PRKD3-209ENST00000477132 COLGALT1Q8NBJ5 622 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 SMG8Q8ND04 991 aaKnown RBP13.59□□□□□ -0.23
PRKD3-209ENST00000477132 P2RX5Q93086 422 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 USP28Q96RU2 1077 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 PLVAPQ9BX97 442 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 THEGQ9P2T0 379 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 DNM3Q9UQ16 869 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 USP20Q9Y2K6 914 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 PCDHB2Q9Y5E7 798 aa13.59□□□□□ -0.23
PRKD3-209ENST00000477132 XIRP2A4UGR9 3374 aa13.58□□□□□ -0.24
PRKD3-209ENST00000477132 HOXA2O43364 376 aa13.58□□□□□ -0.24
PRKD3-209ENST00000477132 BMP15O95972 392 aa13.58□□□□□ -0.24
PRKD3-209ENST00000477132 RAB27AP51159 221 aa13.58□□□□□ -0.24
PRKD3-209ENST00000477132 TFF2Q03403 129 aa13.58□□□□□ -0.24
PRKD3-209ENST00000477132 CEBPZQ03701 1054 aaKnown RBP13.58□□□□□ -0.24
PRKD3-209ENST00000477132 PKP1Q13835 747 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms