RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 PLCB3Q01970 1234 aa20.08■□□□□ 0.81
ABCB1-204ENST00000476862 SPIRE1Q08AE8 756 aa20.08■□□□□ 0.81
ABCB1-204ENST00000476862 TMC7Q7Z402 723 aa20.08■□□□□ 0.81
ABCB1-204ENST00000476862 ZNF579Q8NAF0 562 aaKnown RBP20.08■□□□□ 0.81
ABCB1-204ENST00000476862 RNF149Q8NC42 400 aa20.08■□□□□ 0.81
ABCB1-204ENST00000476862 URGCPQ8TCY9 931 aa20.08■□□□□ 0.81
ABCB1-204ENST00000476862 POP1Q99575 1024 aaKnown RBP20.08■□□□□ 0.81
ABCB1-204ENST00000476862 TRAIPQ9BWF2 469 aa20.08■□□□□ 0.81
ABCB1-204ENST00000476862 FOXP1Q9H334 677 aaPredicted RBP20.08■□□□□ 0.81
ABCB1-204ENST00000476862 FAM105AQ9NUU6 356 aa20.08■□□□□ 0.81
ABCB1-204ENST00000476862 XIRP2A4UGR9 3374 aa20.07■□□□□ 0.8
ABCB1-204ENST00000476862 ST18O60284 1047 aa20.07■□□□□ 0.8
ABCB1-204ENST00000476862 DGAT1O75907 488 aa20.07■□□□□ 0.8
ABCB1-204ENST00000476862 LONRF3Q496Y0 759 aa20.07■□□□□ 0.8
ABCB1-204ENST00000476862 CLLU1OSQ5K130 101 aa20.07■□□□□ 0.8
ABCB1-204ENST00000476862 PLPP4Q5VZY2 271 aa20.07■□□□□ 0.8
ABCB1-204ENST00000476862 LRRC55Q6ZSA7 311 aa20.07■□□□□ 0.8
ABCB1-204ENST00000476862 ADGRD2Q7Z7M1 963 aa20.07■□□□□ 0.8
ABCB1-204ENST00000476862 ZNF598Q86UK7 904 aaKnown RBP20.07■□□□□ 0.8
ABCB1-204ENST00000476862 FERMT3Q86UX7 667 aa20.07■□□□□ 0.8
ABCB1-204ENST00000476862 TMEM169Q96HH4 297 aa20.07■□□□□ 0.8
ABCB1-204ENST00000476862 TCF25Q9BQ70 676 aa20.07■□□□□ 0.8
ABCB1-204ENST00000476862 IFT122Q9HBG6 1241 aa20.07■□□□□ 0.8
ABCB1-204ENST00000476862 NGRNQ9NPE2 291 aaKnown RBP20.07■□□□□ 0.8
ABCB1-204ENST00000476862 HCSTQ9UBK5 93 aa20.07■□□□□ 0.8
ABCB1-204ENST00000476862 INPP5FQ9Y2H2 1132 aa20.07■□□□□ 0.8
ABCB1-204ENST00000476862 LINC01565O15544 149 aa20.06■□□□□ 0.8
ABCB1-204ENST00000476862 LYPLA2O95372 231 aa20.06■□□□□ 0.8
ABCB1-204ENST00000476862 XRCC6P12956 609 aaKnown RBP eCLIP20.06■□□□□ 0.8
ABCB1-204ENST00000476862 LTBRP36941 435 aa20.06■□□□□ 0.8
ABCB1-204ENST00000476862 ERVFC1P60507 584 aa20.06■□□□□ 0.8
ABCB1-204ENST00000476862 ORC2Q13416 577 aaPredicted RBP20.06■□□□□ 0.8
ABCB1-204ENST00000476862 SMAD4Q13485 552 aaKnown RBP20.06■□□□□ 0.8
ABCB1-204ENST00000476862 PCBP1Q15365 356 aaKnown RBP eCLIP20.06■□□□□ 0.8
ABCB1-204ENST00000476862 FAM193BQ96PV7 902 aaPredicted RBP20.06■□□□□ 0.8
ABCB1-204ENST00000476862 MTMR9Q96QG7 549 aa20.06■□□□□ 0.8
ABCB1-204ENST00000476862 HSD17B14Q9BPX1 270 aa20.06■□□□□ 0.8
ABCB1-204ENST00000476862 AGPAT5Q9NUQ2 364 aa20.06■□□□□ 0.8
ABCB1-204ENST00000476862 RNF19AQ9NV58 838 aa20.06■□□□□ 0.8
ABCB1-204ENST00000476862 INO80B-WBP1J3KQ70 363 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 PER2O15055 1255 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 ZBTB39O15060 712 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 MBTPS2O43462 519 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 ZC3H11AO75152 810 aaKnown RBP eCLIP20.05■□□□□ 0.8
ABCB1-204ENST00000476862 AXLP30530 894 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 TECP42680 631 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 BCAR1P56945 870 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 DLX2Q07687 328 aaPredicted RBP20.05■□□□□ 0.8
ABCB1-204ENST00000476862 ST3GAL1Q11201 340 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 RABEP1Q15276 862 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 ZNF174Q15697 407 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 NOMO2Q5JPE7 1267 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 CNNM3Q8NE01 707 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 FBXO18Q8NFZ0 1043 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 LPPQ93052 612 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 TUFT1Q9NNX1 390 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 PCDHB2Q9Y5E7 798 aa20.05■□□□□ 0.8
ABCB1-204ENST00000476862 ARID2Q68CP9 1835 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 POTEMA6NI47 508 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 ZNF623O75123 536 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 TBX10O75333 385 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 OR52Z1P0C646 297 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 ALADP13716 330 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 PBX3P40426 434 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 SMC1AQ14683 1233 aaKnown RBP20.04■□□□□ 0.8
ABCB1-204ENST00000476862 C8orf34Q49A92 452 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 TTC38Q5R3I4 469 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 ADHFE1Q8IWW8 467 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 HACE1Q8IYU2 909 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 PIGOQ8TEQ8 1089 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 NACC1Q96RE7 527 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 GBP3Q9H0R5 595 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 EPHX3Q9H6B9 360 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 UBN1Q9NPG3 1134 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 KANSL3Q9P2N6 904 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 PCDHGC5Q9Y5F6 944 aa20.04■□□□□ 0.8
ABCB1-204ENST00000476862 ATF7P17544 494 aaPredicted RBP20.03■□□□□ 0.8
ABCB1-204ENST00000476862 COL9A1P20849 921 aa20.03■□□□□ 0.8
ABCB1-204ENST00000476862 TRAPPC10P48553 1259 aa20.03■□□□□ 0.8
ABCB1-204ENST00000476862 SMAD2Q15796 467 aaKnown RBP20.03■□□□□ 0.8
ABCB1-204ENST00000476862 DUSP6Q16828 381 aa20.03■□□□□ 0.8
ABCB1-204ENST00000476862 TMEM31Q5JXX7 168 aa20.03■□□□□ 0.8
ABCB1-204ENST00000476862 NOTUMQ6P988 496 aa20.03■□□□□ 0.8
ABCB1-204ENST00000476862 NOSTRINQ8IVI9 506 aa20.03■□□□□ 0.8
ABCB1-204ENST00000476862 RAB34Q9BZG1 259 aa20.03■□□□□ 0.8
ABCB1-204ENST00000476862 TRIM6Q9C030 488 aaPredicted RBP20.03■□□□□ 0.8
ABCB1-204ENST00000476862 TMEM60Q9H2L4 133 aa20.03■□□□□ 0.8
ABCB1-204ENST00000476862 CNTNAP2Q9UHC6 1331 aa20.02■□□□□ 0.8
ABCB1-204ENST00000476862 NT5C1B-RDH14C9J2C7 533 aa20.02■□□□□ 0.8
ABCB1-204ENST00000476862 FSCN2O14926 492 aa20.02■□□□□ 0.8
ABCB1-204ENST00000476862 USO1O60763 962 aaKnown RBP20.02■□□□□ 0.8
ABCB1-204ENST00000476862 ITGA4P13612 1032 aa20.02■□□□□ 0.8
ABCB1-204ENST00000476862 RARRES1P49788 294 aa20.02■□□□□ 0.8
ABCB1-204ENST00000476862 PTENP60484 403 aa20.02■□□□□ 0.8
ABCB1-204ENST00000476862 POU5F1BQ06416 359 aa20.02■□□□□ 0.8
ABCB1-204ENST00000476862 HAUS3Q68CZ6 603 aa20.02■□□□□ 0.8
ABCB1-204ENST00000476862 SLC39A11Q8N1S5 342 aa20.02■□□□□ 0.8
ABCB1-204ENST00000476862 MCPH1Q8NEM0 835 aa20.02■□□□□ 0.8
ABCB1-204ENST00000476862 RSAD1Q9HA92 442 aa20.02■□□□□ 0.8
ABCB1-204ENST00000476862 BARX2Q9UMQ3 279 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms