RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 CCSER1Q9C0I3 900 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 AGPAT5Q9NUQ2 364 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 TMEM161AQ9NX61 479 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 KIAA1671Q9BY89 1806 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 COL4A4P53420 1690 aaPredicted RBP16.65■□□□□ 0.26
DFFA-203ENST00000476658 COL4A6Q14031 1691 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 TCHHQ07283 1943 aa16.64■□□□□ 0.26
DFFA-203ENST00000476658 SPTLC2O15270 562 aa16.64■□□□□ 0.25
DFFA-203ENST00000476658 PLCG1P19174 1290 aa16.64■□□□□ 0.25
DFFA-203ENST00000476658 GATMP50440 423 aa16.64■□□□□ 0.25
DFFA-203ENST00000476658 FAM189BP81408 668 aa16.64■□□□□ 0.25
DFFA-203ENST00000476658 MBTD1Q05BQ5 628 aa16.64■□□□□ 0.25
DFFA-203ENST00000476658 NCBP1Q09161 790 aaKnown RBP16.64■□□□□ 0.25
DFFA-203ENST00000476658 DHX8Q14562 1220 aaKnown RBP16.64■□□□□ 0.25
DFFA-203ENST00000476658 USP49Q70CQ1 688 aa16.64■□□□□ 0.25
DFFA-203ENST00000476658 ECHDC2Q86YB7 292 aa16.64■□□□□ 0.25
DFFA-203ENST00000476658 SYT2Q8N9I0 419 aaPredicted RBP16.64■□□□□ 0.25
DFFA-203ENST00000476658 DEPTORQ8TB45 409 aa16.64■□□□□ 0.25
DFFA-203ENST00000476658 BSNDQ8WZ55 320 aa16.64■□□□□ 0.25
DFFA-203ENST00000476658 ZNF689Q96CS4 500 aaPredicted RBP16.64■□□□□ 0.25
DFFA-203ENST00000476658 C17orf80Q9BSJ5 609 aa16.64■□□□□ 0.25
DFFA-203ENST00000476658 NFKBIZQ9BYH8 718 aa16.64■□□□□ 0.25
DFFA-203ENST00000476658 ELAC1Q9H777 363 aaKnown RBP16.64■□□□□ 0.25
DFFA-203ENST00000476658 RC3H2Q9HBD1 1191 aaKnown RBP16.64■□□□□ 0.25
DFFA-203ENST00000476658 CCDC39Q9UFE4 941 aa16.64■□□□□ 0.25
DFFA-203ENST00000476658 STXBP5LQ9Y2K9 1186 aa16.64■□□□□ 0.25
DFFA-203ENST00000476658 MORC2Q9Y6X9 1032 aaPredicted RBP16.64■□□□□ 0.25
DFFA-203ENST00000476658 A0A0U1RQF3 1178 aa16.63■□□□□ 0.25
DFFA-203ENST00000476658 TBKBP1A7MCY6 615 aa16.63■□□□□ 0.25
DFFA-203ENST00000476658 RFXAPO00287 272 aa16.63■□□□□ 0.25
DFFA-203ENST00000476658 HIP1RO75146 1068 aa16.63■□□□□ 0.25
DFFA-203ENST00000476658 YEATS4O95619 227 aa16.63■□□□□ 0.25
DFFA-203ENST00000476658 BRD1O95696 1058 aa16.63■□□□□ 0.25
DFFA-203ENST00000476658 FGFR1P11362 822 aa16.63■□□□□ 0.25
DFFA-203ENST00000476658 NAMPTP43490 491 aa16.63■□□□□ 0.25
DFFA-203ENST00000476658 SLC12A3P55017 1021 aa16.63■□□□□ 0.25
DFFA-203ENST00000476658 ERVK-21P61565 698 aa16.63■□□□□ 0.25
DFFA-203ENST00000476658 RAD51AP2Q09MP3 1159 aa16.63■□□□□ 0.25
DFFA-203ENST00000476658 PCBP1Q15365 356 aaKnown RBP eCLIP16.63■□□□□ 0.25
DFFA-203ENST00000476658 C1orf186Q6ZWK4 172 aa16.63■□□□□ 0.25
DFFA-203ENST00000476658 CMTR2Q8IYT2 770 aaKnown RBP16.63■□□□□ 0.25
DFFA-203ENST00000476658 DRC1Q96MC2 740 aa16.63■□□□□ 0.25
DFFA-203ENST00000476658 C2orf40Q9H1Z8 148 aa16.63■□□□□ 0.25
DFFA-203ENST00000476658 EPOPA6NHQ4 379 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 HOXA2O43364 376 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 TSPAN1O60635 241 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 PPP6R2O75170 966 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 SKIP12755 728 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 LIG1P18858 919 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 IGFBP4P22692 258 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 AXLP30530 894 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 DNM1Q05193 864 aaKnown RBP16.62■□□□□ 0.25
DFFA-203ENST00000476658 CDCA2Q69YH5 1023 aaPredicted RBP16.62■□□□□ 0.25
DFFA-203ENST00000476658 ATL3Q6DD88 541 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 NOTUMQ6P988 496 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 ABI1Q8IZP0 508 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 FBXO22Q8NEZ5 403 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 LRRC15Q8TF66 581 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 CPB2Q96IY4 423 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 SAMD11Q96NU1 681 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 TIPINQ9BVW5 301 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 BLOC1S4Q9NUP1 217 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 FAM105AQ9NUU6 356 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 PRMT7Q9NVM4 692 aaPredicted RBP16.62■□□□□ 0.25
DFFA-203ENST00000476658 CFAP45Q9UL16 551 aa16.62■□□□□ 0.25
DFFA-203ENST00000476658 CCDC169A6NNP5 214 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 EOMESO95936 686 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 NCLP19338 710 aaKnown RBP16.61■□□□□ 0.25
DFFA-203ENST00000476658 GUCY2CP25092 1073 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 HOXA11P31270 313 aaPredicted RBP16.61■□□□□ 0.25
DFFA-203ENST00000476658 CTNNB1P35222 781 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 RAB27AP51159 221 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 PEX3P56589 373 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 DMP1Q13316 513 aaPredicted RBP16.61■□□□□ 0.25
DFFA-203ENST00000476658 MCM6Q14566 821 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 TMEM132AQ24JP5 1023 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 LONRF3Q496Y0 759 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 EPC2Q52LR7 807 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 RRAGBQ5VZM2 374 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 GPBP1Q86WP2 473 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 TMEM192Q8IY95 271 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 DAW1Q8N136 415 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 GDPD5Q8WTR4 605 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 LARP4BQ92615 738 aaKnown RBP16.61■□□□□ 0.25
DFFA-203ENST00000476658 RAD54LQ92698 747 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 KIFC3Q9BVG8 833 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 TRAIPQ9BWF2 469 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 KCND2Q9NZV8 630 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 ZDHHC9Q9Y397 364 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 MRPL42Q9Y6G3 142 aaKnown RBP16.61■□□□□ 0.25
DFFA-203ENST00000476658 TRANK1O15050 2925 aa16.61■□□□□ 0.25
DFFA-203ENST00000476658 PRRC2BQ5JSZ5 2229 aaKnown RBP16.61■□□□□ 0.25
DFFA-203ENST00000476658 NPHP3-ACAD11A0A0J9YXS1 232 aa16.6■□□□□ 0.25
DFFA-203ENST00000476658 SFI1A8K8P3 1242 aa16.6■□□□□ 0.25
DFFA-203ENST00000476658 B4GALT5O43286 388 aa16.6■□□□□ 0.25
DFFA-203ENST00000476658 CUTAO60888 179 aa16.6■□□□□ 0.25
DFFA-203ENST00000476658 KRT18P05783 430 aaKnown RBP16.6■□□□□ 0.25
DFFA-203ENST00000476658 ATF7P17544 494 aaPredicted RBP16.6■□□□□ 0.25
DFFA-203ENST00000476658 ARF4P18085 180 aaPredicted RBP16.6■□□□□ 0.25
DFFA-203ENST00000476658 CACNB1Q02641 598 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms