RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 JAG1P78504 1218 aa9.07□□□□□ -0.96
VAPB-205ENST00000476395 DHX9Q08211 1270 aaKnown RBP9.07□□□□□ -0.96
VAPB-205ENST00000476395 BLMHQ13867 455 aa9.07□□□□□ -0.96
VAPB-205ENST00000476395 CCDC38Q502W7 563 aa9.07□□□□□ -0.96
VAPB-205ENST00000476395 ASPRV1Q53RT3 343 aa9.07□□□□□ -0.96
VAPB-205ENST00000476395 SLC30A9Q6PML9 568 aa9.07□□□□□ -0.96
VAPB-205ENST00000476395 KCTD1Q719H9 257 aa9.07□□□□□ -0.96
VAPB-205ENST00000476395 CCDC197Q8NCU1 140 aa9.07□□□□□ -0.96
VAPB-205ENST00000476395 TBC1D16Q8TBP0 767 aa9.07□□□□□ -0.96
VAPB-205ENST00000476395 SPIRE2Q8WWL2 714 aa9.07□□□□□ -0.96
VAPB-205ENST00000476395 CHMP6Q96FZ7 201 aa9.07□□□□□ -0.96
VAPB-205ENST00000476395 XPO6Q96QU8 1125 aaKnown RBP9.07□□□□□ -0.96
VAPB-205ENST00000476395 EPAS1Q99814 870 aa9.07□□□□□ -0.96
VAPB-205ENST00000476395 ISCUQ9H1K1 167 aa9.07□□□□□ -0.96
VAPB-205ENST00000476395 PAPOLBQ9NRJ5 636 aaKnown RBP9.07□□□□□ -0.96
VAPB-205ENST00000476395 PPP1R1BQ9UD71 204 aaPredicted RBP9.07□□□□□ -0.96
VAPB-205ENST00000476395 SEC63Q9UGP8 760 aaKnown RBP9.07□□□□□ -0.96
VAPB-205ENST00000476395 MYO3BQ8WXR4 1341 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 FAM86B1E9PN63 330 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 TGFB1I1O43294 461 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 STK10O94804 968 aaKnown RBP9.06□□□□□ -0.96
VAPB-205ENST00000476395 FAM86B2P0C5J1 330 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 RARAP10276 462 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 PYGBP11216 843 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 IFI35P80217 286 aaPredicted RBP9.06□□□□□ -0.96
VAPB-205ENST00000476395 LRRC14Q15048 493 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 KIAA0753Q2KHM9 967 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 SLC9C1Q4G0N8 1177 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 MFSD14BQ5SR56 506 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 PPP1R18Q6NYC8 613 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 SLC30A10Q6XR72 485 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 ZNF804AQ7Z570 1209 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 ZDHHC14Q8IZN3 488 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 METTL13Q8N6R0 699 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 TPCN2Q8NHX9 752 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 ACTRT1Q8TDG2 376 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 MKL1Q969V6 931 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 ZNF317Q96PQ6 595 aaPredicted RBP9.06□□□□□ -0.96
VAPB-205ENST00000476395 PRMT1Q99873 361 aaKnown RBP9.06□□□□□ -0.96
VAPB-205ENST00000476395 SYT15Q9BQS2 421 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 MAF1Q9H063 256 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 EMILIN3Q9NT22 766 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 VAV3Q9UKW4 847 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 CORO1CQ9ULV4 474 aaPredicted RBP9.06□□□□□ -0.96
VAPB-205ENST00000476395 SMIM24O75264 130 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 MMEP08473 750 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 PAPOLAP51003 745 aaKnown RBP9.06□□□□□ -0.96
VAPB-205ENST00000476395 EDRF1Q3B7T1 1238 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 PUS10Q3MIT2 529 aaKnown RBP9.06□□□□□ -0.96
VAPB-205ENST00000476395 RNF220Q5VTB9 566 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 SLC35C1Q96A29 364 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 RNF14Q9UBS8 474 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 AMACRQ9UHK6 382 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 A6NHS1 94 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 NQO1P15559 274 aaKnown RBP9.06□□□□□ -0.96
VAPB-205ENST00000476395 SLCO1A2P46721 670 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 SEPT2Q15019 361 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 BMT2Q1RMZ1 405 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 TDRD12Q587J7 1177 aaKnown RBP9.06□□□□□ -0.96
VAPB-205ENST00000476395 KRT79Q5XKE5 535 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 FAM47EQ6ZV65 393 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 MIGA2Q7L4E1 593 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 ADAT2Q7Z6V5 191 aaKnown RBP9.06□□□□□ -0.96
VAPB-205ENST00000476395 PALB2Q86YC2 1186 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 MGARPQ8TDB4 240 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 HES6Q96HZ4 224 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 REEP2Q9BRK0 252 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 DHX36Q9H2U1 1008 aaKnown RBP9.06□□□□□ -0.96
VAPB-205ENST00000476395 ADAM22Q9P0K1 906 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 ZFATQ9P243 1243 aa9.06□□□□□ -0.96
VAPB-205ENST00000476395 RTCBQ9Y3I0 505 aaKnown RBP9.06□□□□□ -0.96
VAPB-205ENST00000476395 ZBTB5O15062 677 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 DDX3YO15523 660 aaKnown RBP9.05□□□□□ -0.96
VAPB-205ENST00000476395 UFL1O94874 794 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 VIMP08670 466 aaKnown RBP9.05□□□□□ -0.96
VAPB-205ENST00000476395 NFIAQ12857 509 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 LAMB3Q13751 1172 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 TAF11Q15544 211 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 SLC5A9Q2M3M2 681 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 SOGA3Q5TF21 947 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 ANO7Q6IWH7 933 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 SH3BP5LQ7L8J4 393 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 TRPM8Q7Z2W7 1104 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 NT5DC3Q86UY8 548 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 CYP2W1Q8TAV3 490 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 ADAM7Q9H2U9 754 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 ECT2Q9H8V3 914 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 ERVK-5Q9HDB9 667 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 BATF3Q9NR55 127 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 ATP8A1Q9Y2Q0 1164 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 ATP8B3O60423 1300 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 FRMPD4Q14CM0 1322 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 KCNK3O14649 394 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 SCNN1BP51168 640 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 MKRN4PQ13434 485 aaPredicted RBP9.05□□□□□ -0.96
VAPB-205ENST00000476395 ADAM9Q13443 819 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 RAPGEF1Q13905 1077 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 ERMARDQ5T6L9 678 aa9.05□□□□□ -0.96
VAPB-205ENST00000476395 CWF19L1Q69YN2 538 aaKnown RBP9.05□□□□□ -0.96
VAPB-205ENST00000476395 CACNA2D4Q7Z3S7 1137 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms