RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 SAR1AQ9NR31 198 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 SH3GLB1Q9Y371 365 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 TNKSO95271 1327 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 BTBD19C9JJ37 291 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 LAD1O00515 517 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 TBX10O75333 385 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 PLEKHA8P1O95397 391 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 CALM1P0DP23 149 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 CALM2P0DP24 149 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 CALM3P0DP25 149 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 ANXA13P27216 316 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 CCNFP41002 786 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 CDR2Q01850 454 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 WDR72Q3MJ13 1102 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 SPATA24Q86W54 205 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 ST13P4Q8IZP2 240 aaPredicted RBP14.85□□□□□ -0.03
HDAC1-206ENST00000476391 PROM2Q8N271 834 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 UHMK1Q8TAS1 419 aaKnown RBP14.85□□□□□ -0.03
HDAC1-206ENST00000476391 WDR60Q8WVS4 1066 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 PPP2R3CQ969Q6 453 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 AK8Q96MA6 479 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 SMC6Q96SB8 1091 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 PLIN2Q99541 437 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 SYNCQ9H7C4 482 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 STK32BQ9NY57 414 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 NKIRAS1Q9NYS0 192 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 NAGPAQ9UK23 515 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 AMFRQ9UKV5 643 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 NR2E1Q9Y466 385 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 UMODL1Q5DID0 1318 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 MAGEB2O15479 319 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 PSMG1O95456 288 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 SNRPA1P09661 255 aaKnown RBP14.84□□□□□ -0.03
HDAC1-206ENST00000476391 SPATA31D3P0C874 917 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 ZCCHC18P0CG32 403 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 BRAFP15056 766 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 CREB1P16220 341 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 PLCG1P19174 1290 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 GJA8P48165 433 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 HPCAP84074 193 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 ARID5AQ03989 594 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 MOGSQ13724 837 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 ZNF449Q6P9G9 518 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 DNAJC14Q6Y2X3 702 aaPredicted RBP14.84□□□□□ -0.03
HDAC1-206ENST00000476391 SPATA31D4Q6ZUB0 917 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 OTUD6AQ7L8S5 288 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 CATIPQ7Z7H3 387 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 ZNF554Q86TJ5 538 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 GLG1Q92896 1179 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 MAML3Q96JK9 1138 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 CLMNQ96JQ2 1002 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 NACAP1Q9BZK3 213 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 NT5C3AQ9H0P0 336 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 TAOK3Q9H2K8 898 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 MLXIPLQ9NP71 852 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 NDUFA13Q9P0J0 144 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 CHMP2BQ9UQN3 213 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 PFASO15067 1338 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 A0A0J9YVX5 310 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 SMIM31A0A1B0GVY4 71 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 GSG1L2A8MUP6 293 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 DDX3XO00571 662 aaKnown RBP eCLIP14.84□□□□□ -0.03
HDAC1-206ENST00000476391 GH1P01241 217 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 VAV1P15498 845 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 ZFXP17010 805 aaPredicted RBP14.84□□□□□ -0.03
HDAC1-206ENST00000476391 CALML3P27482 149 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 PTK2Q05397 1052 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 PTPROQ16827 1216 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 TBC1D9BQ66K14 1250 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 ALKBH5Q6P6C2 394 aaKnown RBP14.84□□□□□ -0.03
HDAC1-206ENST00000476391 C17orf50Q8WW18 174 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 CRAMP1Q96RY5 1269 aa14.84□□□□□ -0.03
HDAC1-206ENST00000476391 RANBP17Q9H2T7 1088 aaKnown RBP14.84□□□□□ -0.03
HDAC1-206ENST00000476391 ARMCX3Q9UH62 379 aaPredicted RBP14.84□□□□□ -0.03
HDAC1-206ENST00000476391 BARX2Q9UMQ3 279 aaPredicted RBP14.84□□□□□ -0.03
HDAC1-206ENST00000476391 FLT1P17948 1338 aa14.83□□□□□ -0.03
HDAC1-206ENST00000476391 HNRNPCP07910 306 aaKnown RBP eCLIP14.83□□□□□ -0.04
HDAC1-206ENST00000476391 IL9RQ01113 521 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 MPP2Q14168 576 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 R3HDM1Q15032 1099 aaKnown RBP14.83□□□□□ -0.04
HDAC1-206ENST00000476391 LONRF1Q17RB8 773 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 ZNF568Q3ZCX4 644 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 ACSBG2Q5FVE4 666 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 UBAP2Q5T6F2 1119 aaKnown RBP14.83□□□□□ -0.04
HDAC1-206ENST00000476391 TMTC3Q6ZXV5 915 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 SRBD1Q8N5C6 995 aaKnown RBP14.83□□□□□ -0.04
HDAC1-206ENST00000476391 TUBGCP5Q96RT8 1024 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 TSG101Q99816 390 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 DDX50Q9BQ39 737 aaKnown RBP14.83□□□□□ -0.04
HDAC1-206ENST00000476391 EPB41L1Q9H4G0 881 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 RIC8AQ9NPQ8 531 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 KRT82Q9NSB4 513 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 CNTNAP5Q8WYK1 1306 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 KIF13BQ9NQT8 1826 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 MYH3P11055 1940 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 KIF1AQ12756 1690 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 KRT36O76013 467 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 CBX6O95503 412 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 ETS2P15036 469 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 GNAT2P19087 354 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms