RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 IL17RAQ96F46 866 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 CYTH2Q99418 400 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 C11orf70Q9BRQ4 267 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 SHCBP1LQ9BZQ2 653 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 RAVER2Q9HCJ3 691 aaKnown RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 ZNF148Q9UQR1 794 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 L3MBTL1Q9Y468 752 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 STK36Q9NRP7 1315 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 PXDNLA1KZ92 1463 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 CLDN3O15551 220 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 CALUO43852 315 aaPredicted RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 EZRP15311 586 aaKnown RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 UCHL3P15374 230 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 LSP1P33241 339 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 PCK1P35558 622 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 DR1Q01658 176 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 GRM4Q14833 912 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 MTERF2Q49AM1 385 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 GKAP1Q5VSY0 366 aaPredicted RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 PDXDC1Q6P996 788 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 METTL13Q8N6R0 699 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 ANKS4BQ8N8V4 417 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 ZSWIM2Q8NEG5 633 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 PPP1R14CQ8TAE6 165 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 CPA5Q8WXQ8 436 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 WNK4Q96J92 1243 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 THAP2Q9H0W7 228 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 JMJD4Q9H9V9 463 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 CTNNAL1Q9UBT7 734 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 MTRF1LQ9UGC7 380 aaKnown RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 COL6A3P12111 3177 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 CCDC195A0A1B0GUA6 201 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 FTLP02792 175 aaPredicted RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 SERPING1P05155 500 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 SOX11P35716 441 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 MAGEA9P43362 315 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 RHBDL3P58872 404 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 LRRC36Q1X8D7 754 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 TTMPQ5BVD1 217 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 CASC4Q6P4E1 433 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 NLRP14Q86W24 1093 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 DGKHQ86XP1 1220 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 ANKMY2Q8IV38 441 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 CCDC13Q8IYE1 715 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 NETO2Q8NC67 525 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 DCPSQ96C86 337 aaKnown RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 TLR10Q9BXR5 811 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 CCPG1Q9ULG6 757 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 SUGT1Q9Y2Z0 365 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 SPEF2Q9C093 1822 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 N4BP2Q86UW6 1770 aaPredicted RBP5.37□□□□□ -1.55
CCDC39-204ENST00000476379 ARFGEF2Q9Y6D5 1785 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 AKAP3O75969 853 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 CYP2C8P10632 490 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 CPA2P48052 419 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 ACOT2P49753 483 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 MTMR2Q13614 643 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 ALX1Q15699 326 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 IFI16Q16666 785 aaKnown RBP5.37□□□□□ -1.55
CCDC39-204ENST00000476379 SMTNL2Q2TAL5 461 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 NBPF20Q3BBV1 942 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 ZNF571Q7Z3V5 609 aaPredicted RBP5.37□□□□□ -1.55
CCDC39-204ENST00000476379 CATSPER3Q86XQ3 398 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 RPUSD2Q8IZ73 545 aaKnown RBP5.37□□□□□ -1.55
CCDC39-204ENST00000476379 SLC35G2Q8TBE7 412 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 LRRC45Q96CN5 670 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 APOL6Q9BWW8 343 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 ZWILCHQ9H900 591 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 PCSK1NQ9UHG2 260 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 NR2E1Q9Y466 385 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 EMSYQ7Z589 1322 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 EME2A4GXA9 379 aaPredicted RBP5.37□□□□□ -1.55
CCDC39-204ENST00000476379 SPDYE2BA6NHP3 402 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 RGL2O15211 777 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 RHOBTB3O94955 611 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 SPDYE6P0CI01 402 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 TRAPPC10P48553 1259 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 TGFB2P61812 414 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 SGO2Q562F6 1265 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 INTS8Q75QN2 995 aaKnown RBP5.37□□□□□ -1.55
CCDC39-204ENST00000476379 SESTD1Q86VW0 696 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 CYFIP2Q96F07 1278 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 AMNQ9BXJ7 453 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 DNAJC18Q9H819 358 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 PIH1D1Q9NWS0 290 aaKnown RBP5.37□□□□□ -1.55
CCDC39-204ENST00000476379 MARCOQ9UEW3 520 aaPredicted RBP5.37□□□□□ -1.55
CCDC39-204ENST00000476379 RASAL2Q9UJF2 1139 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 ANAPC7Q9UJX3 599 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 ODF2LQ9ULJ1 636 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 COL4A5P29400 1685 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 GOLGA8KD6RF30 607 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 CAND2O75155 1236 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 GRAP2O75791 330 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 BAG2O95816 211 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 IFI35P80217 286 aaPredicted RBP5.37□□□□□ -1.55
CCDC39-204ENST00000476379 SLC29A2Q14542 456 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 KYNUQ16719 465 aa5.37□□□□□ -1.55
CCDC39-204ENST00000476379 SLC35G1Q2M3R5 365 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms