RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 BRMS1Q9HCU9 246 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 ENTPD7Q9NQZ7 604 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 AGPAT5Q9NUQ2 364 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 ORC3Q9UBD5 711 aaPredicted RBP11.09□□□□□ -0.63
PTPN7-208ENST00000476061 STK39Q9UEW8 545 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 COL4A3BPQ9Y5P4 624 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 IRAK3Q9Y616 596 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 TDRD15B5MCY1 1934 aaKnown RBP11.09□□□□□ -0.63
PTPN7-208ENST00000476061 MARCH6O60337 910 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 CSDE1O75534 798 aaKnown RBP11.08□□□□□ -0.64
PTPN7-208ENST00000476061 LYPLA2O95372 231 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 HOXD11P31277 338 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-208ENST00000476061 POLGP54098 1239 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-208ENST00000476061 NPEPPSP55786 919 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 BCAR1P56945 870 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 POU5F1BQ06416 359 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 PLPP4Q5VZY2 271 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 PLA2G4FQ68DD2 849 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 GLB1LQ6UWU2 654 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 CATSPER4Q7RTX7 472 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 MRPL10Q7Z7H8 261 aaKnown RBP11.08□□□□□ -0.64
PTPN7-208ENST00000476061 POTEDQ86YR6 584 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 KSR1Q8IVT5 923 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 CNNM3Q8NE01 707 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 PSPC1Q8WXF1 523 aaKnown RBP11.08□□□□□ -0.64
PTPN7-208ENST00000476061 CASP10Q92851 521 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 GTF3C6Q969F1 213 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 TMEM169Q96HH4 297 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 NLRP4Q96MN2 994 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 LXNQ9BS40 222 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 GJB4Q9NTQ9 266 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 WRAP73Q9P2S5 460 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-208ENST00000476061 MUTYHQ9UIF7 546 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 PCDHA12Q9UN75 941 aa11.08□□□□□ -0.64
PTPN7-208ENST00000476061 PIN4Q9Y237 131 aaKnown RBP11.08□□□□□ -0.64
PTPN7-208ENST00000476061 C2orf71A6NGG8 1288 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 HIDE1A8MVS5 230 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 OFD1O75665 1012 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 SLITRK3O94933 977 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 AXLP30530 894 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 PBX3P40426 434 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 TECP42680 631 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 RBM10P98175 930 aaKnown RBP11.07□□□□□ -0.64
PTPN7-208ENST00000476061 ITIH3Q06033 890 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 MXD4Q14582 209 aaPredicted RBP11.07□□□□□ -0.64
PTPN7-208ENST00000476061 ME3Q16798 604 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 NOMO2Q5JPE7 1267 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 EARS2Q5JPH6 523 aaKnown RBP11.07□□□□□ -0.64
PTPN7-208ENST00000476061 SYCE2Q6PIF2 218 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 DDX53Q86TM3 631 aaKnown RBP11.07□□□□□ -0.64
PTPN7-208ENST00000476061 FERMT3Q86UX7 667 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 ZNF579Q8NAF0 562 aaKnown RBP11.07□□□□□ -0.64
PTPN7-208ENST00000476061 PRPF31Q8WWY3 499 aaKnown RBP11.07□□□□□ -0.64
PTPN7-208ENST00000476061 MFSD14AQ96MC6 490 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 HSD17B14Q9BPX1 270 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 NRDE2Q9H7Z3 1164 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 TBC1D13Q9NVG8 400 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 KANSL3Q9P2N6 904 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 HCFC2Q9Y5Z7 792 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 CNTNAP2Q9UHC6 1331 aa11.07□□□□□ -0.64
PTPN7-208ENST00000476061 DENND4AQ7Z401 1863 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 GALTP07902 379 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 CTSAP10619 480 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 XRCC6P12956 609 aaKnown RBP eCLIP11.06□□□□□ -0.64
PTPN7-208ENST00000476061 LAMTOR4Q0VGL1 99 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 NR5A1Q13285 461 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 EMC2Q15006 297 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 TPRNQ4KMQ1 711 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 XKR9Q5GH70 373 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 NCAPH2Q6IBW4 605 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 IFNLR1Q8IU57 520 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-208ENST00000476061 NSUN7Q8NE18 718 aaKnown RBP11.06□□□□□ -0.64
PTPN7-208ENST00000476061 IGSF21Q96ID5 467 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 DYDC2Q96IM9 177 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 NECTIN4Q96NY8 510 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 MTRQ99707 1265 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 TMEM175Q9BSA9 504 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 ZBP1Q9H171 429 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 UBN1Q9NPG3 1134 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 ANKEF1Q9NU02 776 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 RGL1Q9NZL6 768 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 PCDHB2Q9Y5E7 798 aa11.06□□□□□ -0.64
PTPN7-208ENST00000476061 BTBD18B2RXH4 712 aa11.05□□□□□ -0.64
PTPN7-208ENST00000476061 NT5C1B-RDH14C9J2C7 533 aa11.05□□□□□ -0.64
PTPN7-208ENST00000476061 INPPL1O15357 1258 aa11.05□□□□□ -0.64
PTPN7-208ENST00000476061 CLASP2O75122 1294 aaKnown RBP11.05□□□□□ -0.64
PTPN7-208ENST00000476061 ZC3H11AO75152 810 aaKnown RBP eCLIP11.05□□□□□ -0.64
PTPN7-208ENST00000476061 DGAT1O75907 488 aa11.05□□□□□ -0.64
PTPN7-208ENST00000476061 LARGE1O95461 756 aa11.05□□□□□ -0.64
PTPN7-208ENST00000476061 CXCL14O95715 111 aa11.05□□□□□ -0.64
PTPN7-208ENST00000476061 SRGAP2CP0DJJ0 459 aa11.05□□□□□ -0.64
PTPN7-208ENST00000476061 NCLP19338 710 aaKnown RBP11.05□□□□□ -0.64
PTPN7-208ENST00000476061 HOXA11P31270 313 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-208ENST00000476061 PTENP60484 403 aa11.05□□□□□ -0.64
PTPN7-208ENST00000476061 ZXDAP98168 799 aa11.05□□□□□ -0.64
PTPN7-208ENST00000476061 TRIM29Q14134 588 aa11.05□□□□□ -0.64
PTPN7-208ENST00000476061 TFDP1Q14186 410 aa11.05□□□□□ -0.64
PTPN7-208ENST00000476061 CTTNQ14247 550 aaKnown RBP11.05□□□□□ -0.64
PTPN7-208ENST00000476061 CALCRLQ16602 461 aa11.05□□□□□ -0.64
PTPN7-208ENST00000476061 UBXN11Q5T124 520 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms