RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 LRRC43Q8N309 656 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 ZNF579Q8NAF0 562 aaKnown RBP12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 RNF169Q8NCN4 708 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 PRSS33Q8NF86 280 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 TMEM143Q96AN5 459 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 TMEM117Q9H0C3 514 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 TUFT1Q9NNX1 390 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 PRKAG3Q9UGI9 489 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 PCDHB12Q9Y5F1 795 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 A0A0U1RQF3 1178 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 GRM6O15303 877 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 CSDE1O75534 798 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 CD2BP2O95400 341 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 EOMESO95936 686 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 SKIP12755 728 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 GJB2P29033 226 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 IRS1P35568 1242 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 TECP42680 631 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 PHKA2P46019 1235 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 RARRES1P49788 294 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 RAB27AP51159 221 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 LAMTOR4Q0VGL1 99 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 TFDP1Q14186 410 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 MXD4Q14582 209 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 SRGAP1Q7Z6B7 1085 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 FERMT3Q86UX7 667 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 ECHDC2Q86YB7 292 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 KLHL23Q8NBE8 558 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 PRPF31Q8WWY3 499 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 RSPH1Q8WYR4 309 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 PPP2R3CQ969Q6 453 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 PABPC5Q96DU9 382 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 MFSD14AQ96MC6 490 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 TRAIPQ9BWF2 469 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 MRPL9Q9BYD2 267 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 RAB34Q9BZG1 259 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 IFT122Q9HBG6 1241 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 ALG13Q9NP73 1137 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 AGPAT5Q9NUQ2 364 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 PLAGL2Q9UPG8 496 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 PLXNA3P51805 1871 aa12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 PDCD11Q14690 1871 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-206ENST00000475952 H3BQV1 296 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 LAD1O00515 517 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 ZBTB39O15060 712 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 ERLIN2O94905 339 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 CSPG5O95196 566 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 ITGB1P05556 798 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 SRGAP2CP0DJJ0 459 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 XRCC6P12956 609 aaKnown RBP eCLIP12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 LAG3P18627 525 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 UBE3AQ05086 875 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 PCBP1Q15365 356 aaKnown RBP eCLIP12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 TCEAL5Q5H9L2 206 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 MCTP1Q6DN14 999 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 CATSPER3Q86XQ3 398 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 RNF149Q8NC42 400 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 PIGOQ8TEQ8 1089 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 POLR3CQ9BUI4 534 aaPredicted RBP12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 XPNPEP1Q9NQW7 623 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 SMC3Q9UQE7 1217 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 FAM50BQ9Y247 325 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 STK24Q9Y6E0 443 aa12.67□□□□□ -0.38
NUDCD3-206ENST00000475952 MTCL1Q9Y4B5 1905 aaKnown RBP12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 NCK2O43639 380 aa12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 USO1O60763 962 aaKnown RBP12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 MED24O75448 989 aa12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 MUTP22033 750 aa12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 RPA1P27694 616 aa12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 FXR2P51116 673 aaKnown RBP eCLIP12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 NBR1Q14596 966 aa12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 RILPL1Q5EBL4 403 aa12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 HERC4Q5GLZ8 1057 aaPredicted RBP12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 THNSL1Q8IYQ7 743 aa12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 COLGALT1Q8NBJ5 622 aa12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 HELQQ8TDG4 1101 aa12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 POF1BQ8WVV4 589 aa12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 NACC1Q96RE7 527 aa12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 FAM105AQ9NUU6 356 aa12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 TYW1Q9NV66 732 aaKnown RBP12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 MUTYHQ9UIF7 546 aa12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 DBR1Q9UK59 544 aaKnown RBP12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 RIF1Q5UIP0 2472 aaKnown RBP12.66□□□□□ -0.38
NUDCD3-206ENST00000475952 DMXL1Q9Y485 3027 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 FGF18O76093 207 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 SPATA31C1P0DKV0 1188 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 ATF7P17544 494 aaPredicted RBP12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 PPM1AP35813 382 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 LTBRP36941 435 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 NCBP1Q09161 790 aaKnown RBP12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 PTGDRQ13258 359 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 CLLU1OSQ5K130 101 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 POTEGQ6S5H5 508 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 EP400NLQ6ZTU2 488 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 ZNF598Q86UK7 904 aaKnown RBP12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 MCPH1Q8NEM0 835 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 SPPL3Q8TCT6 385 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 PGBD4Q96DM1 585 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 ZNF558Q96NG5 402 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms