RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 MICAL1Q8TDZ2 1067 aa11.84□□□□□ -0.51
CALD1-217ENST00000475772 PPP2R3CQ969Q6 453 aa11.84□□□□□ -0.51
CALD1-217ENST00000475772 PBXIP1Q96AQ6 731 aa11.84□□□□□ -0.51
CALD1-217ENST00000475772 ASIC4Q96FT7 647 aa11.84□□□□□ -0.51
CALD1-217ENST00000475772 IRX2Q9BZI1 471 aaPredicted RBP11.84□□□□□ -0.51
CALD1-217ENST00000475772 ADAMTS10Q9H324 1103 aa11.84□□□□□ -0.51
CALD1-217ENST00000475772 ELAC1Q9H777 363 aaKnown RBP11.84□□□□□ -0.51
CALD1-217ENST00000475772 TLR9Q9NR96 1032 aa11.84□□□□□ -0.51
CALD1-217ENST00000475772 TMEM161AQ9NX61 479 aa11.84□□□□□ -0.51
CALD1-217ENST00000475772 PCDHB12Q9Y5F1 795 aa11.84□□□□□ -0.51
CALD1-217ENST00000475772 DENND3A2RUS2 1198 aa11.83□□□□□ -0.52
CALD1-217ENST00000475772 HIDE1A8MVS5 230 aa11.83□□□□□ -0.52
CALD1-217ENST00000475772 hCG_1984214I3L0E3 225 aa11.83□□□□□ -0.52
CALD1-217ENST00000475772 IPO5O00410 1097 aaKnown RBP11.83□□□□□ -0.52
CALD1-217ENST00000475772 CPA1P15085 419 aa11.83□□□□□ -0.52
CALD1-217ENST00000475772 ATF7P17544 494 aaPredicted RBP11.83□□□□□ -0.52
CALD1-217ENST00000475772 ZNF76P36508 570 aa11.83□□□□□ -0.52
CALD1-217ENST00000475772 PLCB3Q01970 1234 aa11.83□□□□□ -0.52
CALD1-217ENST00000475772 TCF15Q12870 199 aa11.83□□□□□ -0.52
CALD1-217ENST00000475772 FOXC1Q12948 553 aa11.83□□□□□ -0.52
CALD1-217ENST00000475772 PFKFB3Q16875 520 aaPredicted RBP11.83□□□□□ -0.52
CALD1-217ENST00000475772 SPOUT1Q5T280 376 aaKnown RBP11.83□□□□□ -0.52
CALD1-217ENST00000475772 FAM160B1Q5W0V3 765 aa11.83□□□□□ -0.52
CALD1-217ENST00000475772 MIS18BP1Q6P0N0 1132 aa11.83□□□□□ -0.52
CALD1-217ENST00000475772 FAM43BQ6ZT52 329 aaPredicted RBP11.83□□□□□ -0.52
CALD1-217ENST00000475772 ZNF713Q8N859 430 aaPredicted RBP11.83□□□□□ -0.52
CALD1-217ENST00000475772 ARMC2Q8NEN0 867 aa11.83□□□□□ -0.52
CALD1-217ENST00000475772 MRPS27Q92552 414 aaKnown RBP11.83□□□□□ -0.52
CALD1-217ENST00000475772 RPGRIP1Q96KN7 1286 aa11.83□□□□□ -0.52
CALD1-217ENST00000475772 ZMYND12Q9H0C1 365 aa11.83□□□□□ -0.52
CALD1-217ENST00000475772 PTPRZ1P23471 2315 aaPredicted RBP11.82□□□□□ -0.52
CALD1-217ENST00000475772 KLF18A0A0U1RQI7 1052 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 GOLGA8AA7E2F4 631 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 GOLGA8BA8MQT2 603 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 ZNF862O60290 1169 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 CIITAP33076 1130 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 PBX3P40426 434 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 CLCN3P51790 818 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 ZNF746Q6NUN9 644 aaPredicted RBP11.82□□□□□ -0.52
CALD1-217ENST00000475772 ANKRD54Q6NXT1 300 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 THNSL1Q8IYQ7 743 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 RASGRP4Q8TDF6 673 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 LENG9Q96B70 501 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 ZNF668Q96K58 619 aaPredicted RBP11.82□□□□□ -0.52
CALD1-217ENST00000475772 CDCA3Q99618 268 aaPredicted RBP11.82□□□□□ -0.52
CALD1-217ENST00000475772 ZNF577Q9BSK1 485 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 GLT8D2Q9H1C3 349 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 ATP6V0A4Q9HBG4 840 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 AAASQ9NRG9 546 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 GABBR1Q9UBS5 961 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 CDH22Q9UJ99 828 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 LZTS1Q9Y250 596 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 PCDHA10Q9Y5I2 948 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 CFAP54Q96N23 3096 aa11.82□□□□□ -0.52
CALD1-217ENST00000475772 ESYT2A0FGR8 921 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 GFRA3O60609 400 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 VCPP55072 806 aaKnown RBP11.81□□□□□ -0.52
CALD1-217ENST00000475772 NLRP11P59045 1033 aaKnown RBP11.81□□□□□ -0.52
CALD1-217ENST00000475772 SIGLEC14Q08ET2 396 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 NTRK3Q16288 839 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 ODR4Q5SWX8 454 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 PLPP4Q5VZY2 271 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 PDE12Q6L8Q7 609 aaKnown RBP11.81□□□□□ -0.52
CALD1-217ENST00000475772 EFCAB12Q6NXP0 572 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 KCNT2Q6UVM3 1135 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 ECHDC2Q86YB7 292 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 LRRC71Q8N4P6 559 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 METTL13Q8N6R0 699 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 KCNB2Q92953 911 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 CEP89Q96ST8 783 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 APOL5Q9BWW9 433 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 TMEM117Q9H0C3 514 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 TBC1D22BQ9NU19 505 aa11.81□□□□□ -0.52
CALD1-217ENST00000475772 PRPF3O43395 683 aaKnown RBP11.8□□□□□ -0.52
CALD1-217ENST00000475772 STBD1O95210 358 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 LAG3P18627 525 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 FGFR4P22455 802 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 EIF4BP23588 611 aaKnown RBP11.8□□□□□ -0.52
CALD1-217ENST00000475772 TECP42680 631 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 RCAN1P53805 252 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 UGCGQ16739 394 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 PRR16Q569H4 304 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 BMP2KLQ5H9B9 411 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 CLLU1OSQ5K130 101 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 RNF20Q5VTR2 975 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 CKAP2LQ8IYA6 745 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 FBXL6Q8N531 539 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 FEZF2Q8TBJ5 459 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 GJA10Q969M2 543 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 MRGPRX2Q96LB1 330 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 TCF25Q9BQ70 676 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 FKBPLQ9UIM3 349 aa11.8□□□□□ -0.52
CALD1-217ENST00000475772 PLXNA3P51805 1871 aa11.79□□□□□ -0.52
CALD1-217ENST00000475772 A0A0U1RQF3 1178 aa11.79□□□□□ -0.52
CALD1-217ENST00000475772 MSH4O15457 936 aa11.79□□□□□ -0.52
CALD1-217ENST00000475772 MAGEB2O15479 319 aa11.79□□□□□ -0.52
CALD1-217ENST00000475772 CSDE1O75534 798 aaKnown RBP11.79□□□□□ -0.52
CALD1-217ENST00000475772 PDGFBP01127 241 aaPredicted RBP11.79□□□□□ -0.52
CALD1-217ENST00000475772 PSAPP07602 524 aa11.79□□□□□ -0.52
CALD1-217ENST00000475772 AVPR2P30518 371 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms