RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ADAMTS19Q8TE59 1207 aa17.37■□□□□ 0.37
CPSF3-203ENST00000475482 DYDC2Q96IM9 177 aa17.37■□□□□ 0.37
CPSF3-203ENST00000475482 ZNF668Q96K58 619 aaPredicted RBP17.37■□□□□ 0.37
CPSF3-203ENST00000475482 PYM1Q9BRP8 204 aaKnown RBP17.37■□□□□ 0.37
CPSF3-203ENST00000475482 TRAIPQ9BWF2 469 aa17.37■□□□□ 0.37
CPSF3-203ENST00000475482 RNF19AQ9NV58 838 aa17.37■□□□□ 0.37
CPSF3-203ENST00000475482 SUCLA2Q9P2R7 463 aaPredicted RBP17.37■□□□□ 0.37
CPSF3-203ENST00000475482 FBXO2Q9UK22 296 aaPredicted RBP17.37■□□□□ 0.37
CPSF3-203ENST00000475482 PLXNA4Q9HCM2 1894 aa17.37■□□□□ 0.37
CPSF3-203ENST00000475482 A0A087WZ62 844 aa17.36■□□□□ 0.37
CPSF3-203ENST00000475482 A0A0U1RQF3 1178 aa17.36■□□□□ 0.37
CPSF3-203ENST00000475482 MARCH6O60337 910 aa17.36■□□□□ 0.37
CPSF3-203ENST00000475482 RFC5P40937 340 aa17.36■□□□□ 0.37
CPSF3-203ENST00000475482 RESP18Q5W5W9 173 aa17.36■□□□□ 0.37
CPSF3-203ENST00000475482 NCAPH2Q6IBW4 605 aa17.36■□□□□ 0.37
CPSF3-203ENST00000475482 DTHD1Q6ZMT9 781 aa17.36■□□□□ 0.37
CPSF3-203ENST00000475482 ZNF598Q86UK7 904 aaKnown RBP17.36■□□□□ 0.37
CPSF3-203ENST00000475482 SPPL3Q8TCT6 385 aa17.36■□□□□ 0.37
CPSF3-203ENST00000475482 NLRP7Q8WX94 980 aa17.36■□□□□ 0.37
CPSF3-203ENST00000475482 CCDC34Q96HJ3 373 aa17.36■□□□□ 0.37
CPSF3-203ENST00000475482 CEP170P1Q96L14 293 aa17.36■□□□□ 0.37
CPSF3-203ENST00000475482 EIF2AK1Q9BQI3 630 aaKnown RBP17.36■□□□□ 0.37
CPSF3-203ENST00000475482 FDXACB1Q9BRP7 624 aaPredicted RBP17.36■□□□□ 0.37
CPSF3-203ENST00000475482 GCOM2Q9BZD3 368 aaPredicted RBP17.36■□□□□ 0.37
CPSF3-203ENST00000475482 GZF1Q9H116 711 aaPredicted RBP17.36■□□□□ 0.37
CPSF3-203ENST00000475482 TMEM60Q9H2L4 133 aa17.36■□□□□ 0.37
CPSF3-203ENST00000475482 NSUN3Q9H649 340 aaKnown RBP17.36■□□□□ 0.37
CPSF3-203ENST00000475482 UBE2ZQ9H832 354 aaPredicted RBP17.36■□□□□ 0.37
CPSF3-203ENST00000475482 TTC12Q9H892 705 aaPredicted RBP17.36■□□□□ 0.37
CPSF3-203ENST00000475482 ATP6V0A4Q9HBG4 840 aa17.36■□□□□ 0.37
CPSF3-203ENST00000475482 IFT122Q9HBG6 1241 aa17.36■□□□□ 0.37
CPSF3-203ENST00000475482 CHST12Q9NRB3 414 aa17.36■□□□□ 0.37
CPSF3-203ENST00000475482 ZBTB39O15060 712 aa17.35■□□□□ 0.37
CPSF3-203ENST00000475482 GAS2O43903 313 aaKnown RBP17.35■□□□□ 0.37
CPSF3-203ENST00000475482 ITGB1P05556 798 aa17.35■□□□□ 0.37
CPSF3-203ENST00000475482 OR52Z1P0C646 297 aa17.35■□□□□ 0.37
CPSF3-203ENST00000475482 ZSCAN20P17040 1043 aaPredicted RBP17.35■□□□□ 0.37
CPSF3-203ENST00000475482 LONP1P36776 959 aaKnown RBP17.35■□□□□ 0.37
CPSF3-203ENST00000475482 TXLNAP40222 546 aa17.35■□□□□ 0.37
CPSF3-203ENST00000475482 CTTNQ14247 550 aaKnown RBP17.35■□□□□ 0.37
CPSF3-203ENST00000475482 PAN2Q504Q3 1202 aaKnown RBP17.35■□□□□ 0.37
CPSF3-203ENST00000475482 TCEAL5Q5H9L2 206 aa17.35■□□□□ 0.37
CPSF3-203ENST00000475482 OTUD6AQ7L8S5 288 aa17.35■□□□□ 0.37
CPSF3-203ENST00000475482 ECHDC2Q86YB7 292 aa17.35■□□□□ 0.37
CPSF3-203ENST00000475482 RHPN2Q8IUC4 686 aa17.35■□□□□ 0.37
CPSF3-203ENST00000475482 NEK9Q8TD19 979 aa17.35■□□□□ 0.37
CPSF3-203ENST00000475482 SLC7A3Q8WY07 619 aa17.35■□□□□ 0.37
CPSF3-203ENST00000475482 RAB34Q9BZG1 259 aa17.35■□□□□ 0.37
CPSF3-203ENST00000475482 INO80BQ9C086 356 aaPredicted RBP17.35■□□□□ 0.37
CPSF3-203ENST00000475482 TMEM117Q9H0C3 514 aa17.35■□□□□ 0.37
CPSF3-203ENST00000475482 NUP62CLQ9H1M0 184 aa17.35■□□□□ 0.37
CPSF3-203ENST00000475482 DACT1Q9NYF0 836 aa17.35■□□□□ 0.37
CPSF3-203ENST00000475482 TMEM63CQ9P1W3 806 aa17.35■□□□□ 0.37
CPSF3-203ENST00000475482 FAM237AA0A1B0GTK4 181 aa17.34■□□□□ 0.37
CPSF3-203ENST00000475482 CSDE1O75534 798 aaKnown RBP17.34■□□□□ 0.37
CPSF3-203ENST00000475482 EOMESO95936 686 aa17.34■□□□□ 0.37
CPSF3-203ENST00000475482 FGFR1P11362 822 aa17.34■□□□□ 0.37
CPSF3-203ENST00000475482 ATF7P17544 494 aaPredicted RBP17.34■□□□□ 0.37
CPSF3-203ENST00000475482 LIG1P18858 919 aa17.34■□□□□ 0.37
CPSF3-203ENST00000475482 FGFR4P22455 802 aa17.34■□□□□ 0.37
CPSF3-203ENST00000475482 DNAJB1P25685 340 aa17.34■□□□□ 0.37
CPSF3-203ENST00000475482 TXKP42681 527 aa17.34■□□□□ 0.37
CPSF3-203ENST00000475482 CYP4A11Q02928 519 aa17.34■□□□□ 0.37
CPSF3-203ENST00000475482 CTC1Q2NKJ3 1217 aa17.34■□□□□ 0.37
CPSF3-203ENST00000475482 LEXMQ3ZCV2 418 aa17.34■□□□□ 0.37
CPSF3-203ENST00000475482 KSR1Q8IVT5 923 aa17.34■□□□□ 0.37
CPSF3-203ENST00000475482 KLHL23Q8NBE8 558 aa17.34■□□□□ 0.37
CPSF3-203ENST00000475482 PABPC5Q96DU9 382 aaKnown RBP17.34■□□□□ 0.37
CPSF3-203ENST00000475482 CASD1Q96PB1 797 aa17.34■□□□□ 0.37
CPSF3-203ENST00000475482 UHRF1Q96T88 793 aaPredicted RBP17.34■□□□□ 0.37
CPSF3-203ENST00000475482 CWH43Q9H720 699 aa17.34■□□□□ 0.37
CPSF3-203ENST00000475482 ALG13Q9NP73 1137 aaKnown RBP17.34■□□□□ 0.37
CPSF3-203ENST00000475482 TYW1Q9NV66 732 aaKnown RBP17.34■□□□□ 0.37
CPSF3-203ENST00000475482 COL4A3BPQ9Y5P4 624 aa17.34■□□□□ 0.37
CPSF3-203ENST00000475482 VWA3AA6NCI4 1184 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 TBKBP1A7MCY6 615 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 TNFRSF10AO00220 468 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 HOXA2O43364 376 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 NR1I2O75469 434 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 XRCC6P12956 609 aaKnown RBP eCLIP17.33■□□□□ 0.36
CPSF3-203ENST00000475482 SFPQP23246 707 aaKnown RBP eCLIP17.33■□□□□ 0.36
CPSF3-203ENST00000475482 SYKP43405 635 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 POLGP54098 1239 aaPredicted RBP17.33■□□□□ 0.36
CPSF3-203ENST00000475482 ZSCAN23Q3MJ62 389 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 LRRC55Q6ZSA7 311 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 TPH2Q8IWU9 490 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 C4orf32Q8N8J7 132 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 PRPF31Q8WWY3 499 aaKnown RBP17.33■□□□□ 0.36
CPSF3-203ENST00000475482 AK8Q96MA6 479 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 TIGD1Q96MW7 591 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 SCLT1Q96NL6 688 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 TNMDQ9H2S6 317 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 XPNPEP1Q9NQW7 623 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 ANKEF1Q9NU02 776 aa17.33■□□□□ 0.36
CPSF3-203ENST00000475482 HOOK1Q9UJC3 728 aaKnown RBP17.33■□□□□ 0.36
CPSF3-203ENST00000475482 A0A1B0GVL5 298 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 ASAP2O43150 1006 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 NCK2O43639 380 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 ZNF623O75123 536 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 SPATA31C1P0DKV0 1188 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms