RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ANGPT1Q15389 498 aa14.18□□□□□ -0.14
SKA3-206ENST00000475251 PTPN14Q15678 1187 aa14.18□□□□□ -0.14
SKA3-206ENST00000475251 CCDC148Q8NFR7 591 aa14.18□□□□□ -0.14
SKA3-206ENST00000475251 AUTS2Q8WXX7 1259 aa14.18□□□□□ -0.14
SKA3-206ENST00000475251 STAMQ92783 540 aa14.18□□□□□ -0.14
SKA3-206ENST00000475251 JPH2Q9BR39 696 aaPredicted RBP14.18□□□□□ -0.14
SKA3-206ENST00000475251 TEKT3Q9BXF9 490 aa14.18□□□□□ -0.14
SKA3-206ENST00000475251 NRDE2Q9H7Z3 1164 aa14.18□□□□□ -0.14
SKA3-206ENST00000475251 FAM105AQ9NUU6 356 aa14.18□□□□□ -0.14
SKA3-206ENST00000475251 NAP1L2Q9ULW6 460 aaPredicted RBP14.18□□□□□ -0.14
SKA3-206ENST00000475251 PIN4Q9Y237 131 aaKnown RBP14.18□□□□□ -0.14
SKA3-206ENST00000475251 SSX2IPQ9Y2D8 614 aa14.18□□□□□ -0.14
SKA3-206ENST00000475251 MYO15AQ9UKN7 3530 aa14.18□□□□□ -0.14
SKA3-206ENST00000475251 PTPRZ1P23471 2315 aaPredicted RBP14.17□□□□□ -0.14
SKA3-206ENST00000475251 CHMP2AO43633 222 aa14.17□□□□□ -0.14
SKA3-206ENST00000475251 ZNF623O75123 536 aa14.17□□□□□ -0.14
SKA3-206ENST00000475251 RFX1P22670 979 aa14.17□□□□□ -0.14
SKA3-206ENST00000475251 CDC27P30260 824 aa14.17□□□□□ -0.14
SKA3-206ENST00000475251 USP11P51784 963 aa14.17□□□□□ -0.14
SKA3-206ENST00000475251 LETM2Q2VYF4 491 aa14.17□□□□□ -0.14
SKA3-206ENST00000475251 XKR3Q5GH77 459 aa14.17□□□□□ -0.14
SKA3-206ENST00000475251 LRCH2Q5VUJ6 765 aa14.17□□□□□ -0.14
SKA3-206ENST00000475251 CYP26C1Q6V0L0 522 aa14.17□□□□□ -0.14
SKA3-206ENST00000475251 TMEM173Q86WV6 379 aaPredicted RBP14.17□□□□□ -0.14
SKA3-206ENST00000475251 SIX5Q8N196 739 aa14.17□□□□□ -0.14
SKA3-206ENST00000475251 DTWD2Q8NBA8 298 aa14.17□□□□□ -0.14
SKA3-206ENST00000475251 LENG9Q96B70 501 aa14.17□□□□□ -0.14
SKA3-206ENST00000475251 FAM193BQ96PV7 902 aaPredicted RBP14.17□□□□□ -0.14
SKA3-206ENST00000475251 NIFKQ9BYG3 293 aaKnown RBP14.17□□□□□ -0.14
SKA3-206ENST00000475251 KCNK12Q9HB15 430 aa14.17□□□□□ -0.14
SKA3-206ENST00000475251 MRPL17Q9NRX2 175 aaKnown RBP14.17□□□□□ -0.14
SKA3-206ENST00000475251 FAM217BQ9NTX9 383 aaPredicted RBP14.17□□□□□ -0.14
SKA3-206ENST00000475251 KANSL3Q9P2N6 904 aa14.17□□□□□ -0.14
SKA3-206ENST00000475251 SEPT9Q9UHD8 586 aaPredicted RBP14.17□□□□□ -0.14
SKA3-206ENST00000475251 INPP5FQ9Y2H2 1132 aa14.17□□□□□ -0.14
SKA3-206ENST00000475251 WDR81Q562E7 1941 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 A0A087WZ62 844 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 MSH4O15457 936 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 CSDE1O75534 798 aaKnown RBP14.16□□□□□ -0.14
SKA3-206ENST00000475251 OFD1O75665 1012 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 NPR3P17342 541 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 CLCN4P51793 760 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 TARBP2Q15633 366 aaKnown RBP14.16□□□□□ -0.14
SKA3-206ENST00000475251 TSGA10IPQ3SY00 556 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 MTERF2Q49AM1 385 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 KANK3Q6NY19 840 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 CATSPER4Q7RTX7 472 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 CMASQ8NFW8 434 aaPredicted RBP14.16□□□□□ -0.14
SKA3-206ENST00000475251 LPPQ93052 612 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 CCDC136Q96JN2 1154 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 TCEANC2Q96MN5 208 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 KLHL5Q96PQ7 755 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 FDXACB1Q9BRP7 624 aaPredicted RBP14.16□□□□□ -0.14
SKA3-206ENST00000475251 TMEM175Q9BSA9 504 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 C22orf23Q9BZE7 217 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 GBP3Q9H0R5 595 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 WNT16Q9UBV4 365 aa14.16□□□□□ -0.14
SKA3-206ENST00000475251 CNTNAP2Q9UHC6 1331 aa14.15□□□□□ -0.14
SKA3-206ENST00000475251 IGKV6-21A0A0C4DH24 114 aa14.15□□□□□ -0.14
SKA3-206ENST00000475251 STK25O00506 426 aa14.15□□□□□ -0.14
SKA3-206ENST00000475251 PRPF3O43395 683 aaKnown RBP14.15□□□□□ -0.14
SKA3-206ENST00000475251 LMNAP02545 664 aaKnown RBP14.15□□□□□ -0.14
SKA3-206ENST00000475251 ALDH2P05091 517 aa14.15□□□□□ -0.14
SKA3-206ENST00000475251 ADH1AP07327 375 aa14.15□□□□□ -0.14
SKA3-206ENST00000475251 ADD1P35611 737 aaKnown RBP14.15□□□□□ -0.14
SKA3-206ENST00000475251 SLC11A1P49279 550 aa14.15□□□□□ -0.14
SKA3-206ENST00000475251 UGCGQ16739 394 aa14.15□□□□□ -0.14
SKA3-206ENST00000475251 MIER3Q7Z3K6 550 aa14.15□□□□□ -0.14
SKA3-206ENST00000475251 RHPN2Q8IUC4 686 aa14.15□□□□□ -0.14
SKA3-206ENST00000475251 KCNG4Q8TDN1 519 aa14.15□□□□□ -0.14
SKA3-206ENST00000475251 SLC5A5Q92911 643 aa14.15□□□□□ -0.14
SKA3-206ENST00000475251 NXPE3Q969Y0 559 aa14.15□□□□□ -0.14
SKA3-206ENST00000475251 RHOBTB2Q9BYZ6 727 aa14.15□□□□□ -0.14
SKA3-206ENST00000475251 SUCLA2Q9P2R7 463 aaPredicted RBP14.15□□□□□ -0.14
SKA3-206ENST00000475251 FAM186AA6NE01 2351 aa14.14□□□□□ -0.15
SKA3-206ENST00000475251 PI15O43692 258 aa14.14□□□□□ -0.15
SKA3-206ENST00000475251 URODP06132 367 aa14.14□□□□□ -0.15
SKA3-206ENST00000475251 CNPP09543 421 aaKnown RBP14.14□□□□□ -0.15
SKA3-206ENST00000475251 DRP2Q13474 957 aa14.14□□□□□ -0.15
SKA3-206ENST00000475251 LONRF3Q496Y0 759 aa14.14□□□□□ -0.15
SKA3-206ENST00000475251 ZC3H14Q6PJT7 736 aaKnown RBP14.14□□□□□ -0.15
SKA3-206ENST00000475251 EXOC8Q8IYI6 725 aa14.14□□□□□ -0.15
SKA3-206ENST00000475251 BCL7CQ8WUZ0 217 aaPredicted RBP14.14□□□□□ -0.15
SKA3-206ENST00000475251 UNC45AQ9H3U1 944 aa14.14□□□□□ -0.15
SKA3-206ENST00000475251 RSAD1Q9HA92 442 aa14.14□□□□□ -0.15
SKA3-206ENST00000475251 UBN1Q9NPG3 1134 aa14.14□□□□□ -0.15
SKA3-206ENST00000475251 DNAJB4Q9UDY4 337 aa14.14□□□□□ -0.15
SKA3-206ENST00000475251 FAN1Q9Y2M0 1017 aa14.14□□□□□ -0.15
SKA3-206ENST00000475251 PCDHB2Q9Y5E7 798 aa14.14□□□□□ -0.15
SKA3-206ENST00000475251 DKC1O60832 514 aaKnown RBP eCLIP14.13□□□□□ -0.15
SKA3-206ENST00000475251 MAFO75444 373 aaPredicted RBP14.13□□□□□ -0.15
SKA3-206ENST00000475251 SOD2P04179 222 aa14.13□□□□□ -0.15
SKA3-206ENST00000475251 SSBP05455 408 aaKnown RBP eCLIP14.13□□□□□ -0.15
SKA3-206ENST00000475251 GBP2P32456 591 aaPredicted RBP14.13□□□□□ -0.15
SKA3-206ENST00000475251 CNNM3Q8NE01 707 aa14.13□□□□□ -0.15
SKA3-206ENST00000475251 SLC7A3Q8WY07 619 aa14.13□□□□□ -0.15
SKA3-206ENST00000475251 NLRP4Q96MN2 994 aa14.13□□□□□ -0.15
SKA3-206ENST00000475251 RNF26Q9BY78 433 aaPredicted RBP14.13□□□□□ -0.15
SKA3-206ENST00000475251 WDR6Q9NNW5 1121 aaKnown RBP14.13□□□□□ -0.15
SKA3-206ENST00000475251 MAN1C1Q9NR34 630 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms