RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 XPNPEP1Q9NQW7 623 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 DMAC2Q9NW81 257 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 TRMT1Q9NXH9 659 aaKnown RBP11.18□□□□□ -0.62
PCCB-213ENST00000475214 TBX20Q9UMR3 447 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 SIK3Q9Y2K2 1263 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 HTTP42858 3142 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 ZNF236Q9UL36 1845 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 DENND3A2RUS2 1198 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 KIF2AO00139 706 aaPredicted RBP11.17□□□□□ -0.62
PCCB-213ENST00000475214 GAS2O43903 313 aaKnown RBP11.17□□□□□ -0.62
PCCB-213ENST00000475214 SNAI1O95863 264 aaPredicted RBP11.17□□□□□ -0.62
PCCB-213ENST00000475214 KRT13P13646 458 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 FECHP22830 423 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 CASP4P49662 377 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 KLK7P49862 253 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 MAP2K5Q13163 448 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 TARBP2Q15633 366 aaKnown RBP11.17□□□□□ -0.62
PCCB-213ENST00000475214 PTPN14Q15678 1187 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 DCAF17Q5H9S7 520 aaPredicted RBP11.17□□□□□ -0.62
PCCB-213ENST00000475214 E4F1Q66K89 784 aaPredicted RBP11.17□□□□□ -0.62
PCCB-213ENST00000475214 MAP4K3Q8IVH8 894 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 SLAIN1Q8ND83 568 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 TMEM161BQ8NDZ6 487 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 ATP8B4Q8TF62 1192 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 TCP11Q8WWU5 503 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 COPS5Q92905 334 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 DNAJC7Q99615 494 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 JPH2Q9BR39 696 aaPredicted RBP11.17□□□□□ -0.62
PCCB-213ENST00000475214 TTYH3Q9C0H2 523 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 ABHD16BQ9H3Z7 469 aa11.17□□□□□ -0.62
PCCB-213ENST00000475214 CENPFP49454 3210 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 GOLGA6L9A6NEM1 432 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 RNF225M0QZC1 329 aaPredicted RBP11.16□□□□□ -0.62
PCCB-213ENST00000475214 MAPK13O15264 365 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 HBP1O60381 514 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 MAFO75444 373 aaPredicted RBP11.16□□□□□ -0.62
PCCB-213ENST00000475214 TUBB4AP04350 444 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 MARK3P27448 753 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 ARL2P36404 184 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 NAMPTP43490 491 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 ARHGAP1Q07960 439 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 KCNMA1Q12791 1236 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 STRN3Q13033 797 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 IRF5Q13568 498 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 ACVR2BQ13705 512 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 IER5Q5VY09 327 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 IQSEC1Q6DN90 963 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 GBP6Q6ZN66 633 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 INTS8Q75QN2 995 aaKnown RBP11.16□□□□□ -0.62
PCCB-213ENST00000475214 CACNA2D4Q7Z3S7 1137 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 XXYLT1Q8NBI6 393 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 NPLOC4Q8TAT6 608 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 DEPTORQ8TB45 409 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 SH3TC2Q8TF17 1288 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 BSNDQ8WZ55 320 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 EMID1Q96A84 441 aaPredicted RBP11.16□□□□□ -0.62
PCCB-213ENST00000475214 CEP89Q96ST8 783 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 LSM14BQ9BX40 385 aaKnown RBP11.16□□□□□ -0.62
PCCB-213ENST00000475214 KATNBL1Q9H079 304 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 NUCKS1Q9H1E3 243 aaKnown RBP11.16□□□□□ -0.62
PCCB-213ENST00000475214 IKZF4Q9H2S9 585 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 FAM207AQ9NSI2 230 aaPredicted RBP11.16□□□□□ -0.62
PCCB-213ENST00000475214 AGPAT5Q9NUQ2 364 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 ERAP1Q9NZ08 941 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 TRPC6Q9Y210 931 aa11.16□□□□□ -0.62
PCCB-213ENST00000475214 SOWAHDA6NJG2 315 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 USP27XA6NNY8 438 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 TNPO2O14787 897 aaKnown RBP11.15□□□□□ -0.62
PCCB-213ENST00000475214 CCDC175P0C221 793 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 TNNT1P13805 278 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 ADCYAP1R1P41586 468 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 HSP90AA2PQ14568 343 aaPredicted RBP11.15□□□□□ -0.62
PCCB-213ENST00000475214 PLCB4Q15147 1175 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 EXOC3L4Q17RC7 722 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 DUSP28Q4G0W2 176 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 BRDTQ58F21 947 aaPredicted RBP11.15□□□□□ -0.62
PCCB-213ENST00000475214 MORN1Q5T089 497 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 CCDC155Q8N6L0 562 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 PPTC7Q8NI37 304 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 PXYLP1Q8TE99 480 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 KCNN1Q92952 543 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 SLC35C1Q96A29 364 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 TMEM143Q96AN5 459 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 BICD1Q96G01 975 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 BORCS6Q96GS4 357 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 PPP1R13BQ96KQ4 1090 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 C16orf45Q96MC5 204 aaPredicted RBP11.15□□□□□ -0.62
PCCB-213ENST00000475214 PCIF1Q9H4Z3 704 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 HSPBP1Q9NZL4 362 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 CEP72Q9P209 647 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 ARHGAP28Q9P2N2 729 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 ZHX1Q9UKY1 873 aaPredicted RBP11.15□□□□□ -0.62
PCCB-213ENST00000475214 PPP2R2CQ9Y2T4 447 aa11.15□□□□□ -0.62
PCCB-213ENST00000475214 GTPBP10A4D1E9 387 aaKnown RBP11.14□□□□□ -0.63
PCCB-213ENST00000475214 LRRIQ4A6NIV6 560 aa11.14□□□□□ -0.63
PCCB-213ENST00000475214 K7ERI5 159 aa11.14□□□□□ -0.63
PCCB-213ENST00000475214 N4BP1O75113 896 aaKnown RBP11.14□□□□□ -0.63
PCCB-213ENST00000475214 PPFIA4O75335 1185 aa11.14□□□□□ -0.63
PCCB-213ENST00000475214 LGALS2P05162 132 aa11.14□□□□□ -0.63
PCCB-213ENST00000475214 HOXC6P09630 235 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms