RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 EMC2Q15006 297 aa13.67□□□□□ -0.22
SSR1-205ENST00000475213 RABEP1Q15276 862 aa13.67□□□□□ -0.22
SSR1-205ENST00000475213 CLLU1OSQ5K130 101 aa13.67□□□□□ -0.22
SSR1-205ENST00000475213 LRRC55Q6ZSA7 311 aa13.67□□□□□ -0.22
SSR1-205ENST00000475213 EP400NLQ6ZTU2 488 aa13.67□□□□□ -0.22
SSR1-205ENST00000475213 CATSPER4Q7RTX7 472 aa13.67□□□□□ -0.22
SSR1-205ENST00000475213 RNF169Q8NCN4 708 aa13.67□□□□□ -0.22
SSR1-205ENST00000475213 MTRQ99707 1265 aa13.67□□□□□ -0.22
SSR1-205ENST00000475213 CLDND1Q9NY35 253 aa13.67□□□□□ -0.22
SSR1-205ENST00000475213 H3BQ06 376 aaPredicted RBP13.66□□□□□ -0.22
SSR1-205ENST00000475213 NCK2O43639 380 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 SRGAP2CP0DJJ0 459 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 LAG3P18627 525 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 LTBRP36941 435 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 PHKA2P46019 1235 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 ZNF174Q15697 407 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 CTC1Q2NKJ3 1217 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 TWF2Q6IBS0 349 aaKnown RBP13.66□□□□□ -0.22
SSR1-205ENST00000475213 FERMT3Q86UX7 667 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 THNSL1Q8IYQ7 743 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 ABI1Q8IZP0 508 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 LRRC43Q8N309 656 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 TCP11Q8WWU5 503 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 TRAIPQ9BWF2 469 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 IGFLR1Q9H665 355 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 MINDY3Q9H8M7 445 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 XPNPEP1Q9NQW7 623 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 ANKEF1Q9NU02 776 aa13.66□□□□□ -0.22
SSR1-205ENST00000475213 PIN4Q9Y237 131 aaKnown RBP13.66□□□□□ -0.22
SSR1-205ENST00000475213 A0A087WWV3 80 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 GRXCR2A6NFK2 248 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 ASAP2O43150 1006 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 ST18O60284 1047 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 FGF18O76093 207 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 IL9P15248 144 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 TECP42680 631 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 UBE3AQ05086 875 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 ORC2Q13416 577 aaPredicted RBP13.65□□□□□ -0.22
SSR1-205ENST00000475213 GNL2Q13823 731 aaKnown RBP13.65□□□□□ -0.22
SSR1-205ENST00000475213 CSPP1Q1MSJ5 1256 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 PTCRAQ6ISU1 281 aaPredicted RBP13.65□□□□□ -0.22
SSR1-205ENST00000475213 SRGAP1Q7Z6B7 1085 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 ADGRD2Q7Z7M1 963 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 NOSTRINQ8IVI9 506 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 RNF149Q8NC42 400 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 HELQQ8TDG4 1101 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 PIGOQ8TEQ8 1089 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 AGPAT5Q9NUQ2 364 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 FAM105AQ9NUU6 356 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 PCDHGC5Q9Y5F6 944 aa13.65□□□□□ -0.22
SSR1-205ENST00000475213 LINC01565O15544 149 aa13.64□□□□□ -0.23
SSR1-205ENST00000475213 DGAT1O75907 488 aa13.64□□□□□ -0.23
SSR1-205ENST00000475213 OR52Z1P0C646 297 aa13.64□□□□□ -0.23
SSR1-205ENST00000475213 SPATA31C1P0DKV0 1188 aa13.64□□□□□ -0.23
SSR1-205ENST00000475213 SKIP12755 728 aa13.64□□□□□ -0.23
SSR1-205ENST00000475213 TRAPPC10P48553 1259 aa13.64□□□□□ -0.23
SSR1-205ENST00000475213 RARRES1P49788 294 aa13.64□□□□□ -0.23
SSR1-205ENST00000475213 DLX2Q07687 328 aaPredicted RBP13.64□□□□□ -0.23
SSR1-205ENST00000475213 PUS10Q3MIT2 529 aaKnown RBP13.64□□□□□ -0.23
SSR1-205ENST00000475213 LONRF3Q496Y0 759 aa13.64□□□□□ -0.23
SSR1-205ENST00000475213 TTC38Q5R3I4 469 aa13.64□□□□□ -0.23
SSR1-205ENST00000475213 KCNT2Q6UVM3 1135 aa13.64□□□□□ -0.23
SSR1-205ENST00000475213 LPPQ93052 612 aa13.64□□□□□ -0.23
SSR1-205ENST00000475213 PPP2R3CQ969Q6 453 aa13.64□□□□□ -0.23
SSR1-205ENST00000475213 TLR9Q9NR96 1032 aa13.64□□□□□ -0.23
SSR1-205ENST00000475213 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.63□□□□□ -0.23
SSR1-205ENST00000475213 MEIS3P2A8K0S8 358 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 ZNF623O75123 536 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 TBX10O75333 385 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 MED24O75448 989 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 CD2BP2O95400 341 aaKnown RBP13.63□□□□□ -0.23
SSR1-205ENST00000475213 XRCC6P12956 609 aaKnown RBP eCLIP13.63□□□□□ -0.23
SSR1-205ENST00000475213 U2AF2P26368 475 aaKnown RBP eCLIP13.63□□□□□ -0.23
SSR1-205ENST00000475213 HOXA11P31270 313 aaPredicted RBP13.63□□□□□ -0.23
SSR1-205ENST00000475213 ARL2P36404 184 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 PBX3P40426 434 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 NRIP1P48552 1158 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 RAB27AP51159 221 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 PTENP60484 403 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 ERVFC1P60507 584 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 PLCB3Q01970 1234 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 ADAM15Q13444 863 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 MXD4Q14582 209 aaPredicted RBP13.63□□□□□ -0.23
SSR1-205ENST00000475213 NBR1Q14596 966 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 LCE2DQ5TA82 110 aaPredicted RBP13.63□□□□□ -0.23
SSR1-205ENST00000475213 RBM23Q86U06 439 aaKnown RBP13.63□□□□□ -0.23
SSR1-205ENST00000475213 CATSPER3Q86XQ3 398 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 FAM178BQ8IXR5 827 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 C4orf32Q8N8J7 132 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 ASAP3Q8TDY4 903 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 MICAL1Q8TDZ2 1067 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 MRPS27Q92552 414 aaKnown RBP13.63□□□□□ -0.23
SSR1-205ENST00000475213 TMX3Q96JJ7 454 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 CCDC43Q96MW1 224 aaKnown RBP13.63□□□□□ -0.23
SSR1-205ENST00000475213 ZNF558Q96NG5 402 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 POLR3CQ9BUI4 534 aaPredicted RBP13.63□□□□□ -0.23
SSR1-205ENST00000475213 MRPL9Q9BYD2 267 aaKnown RBP13.63□□□□□ -0.23
SSR1-205ENST00000475213 UPF2Q9HAU5 1272 aaKnown RBP13.63□□□□□ -0.23
SSR1-205ENST00000475213 TUFT1Q9NNX1 390 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 NOL7Q9UMY1 257 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms