RNA–Protein interactions for RNA: ENST00000474880.5

ARPC1B-216, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-216ENST00000474880 RNF149Q8NC42 400 aa12.3□□□□□ -0.44
ARPC1B-216ENST00000474880 P2RX5Q93086 422 aa12.3□□□□□ -0.44
ARPC1B-216ENST00000474880 LMAN2LQ9H0V9 348 aa12.3□□□□□ -0.44
ARPC1B-216ENST00000474880 ZSCAN16Q9H4T2 348 aaPredicted RBP12.3□□□□□ -0.44
ARPC1B-216ENST00000474880 NSUN3Q9H649 340 aaKnown RBP12.3□□□□□ -0.44
ARPC1B-216ENST00000474880 ALG13Q9NP73 1137 aaKnown RBP12.3□□□□□ -0.44
ARPC1B-216ENST00000474880 CHST12Q9NRB3 414 aa12.3□□□□□ -0.44
ARPC1B-216ENST00000474880 DDX19AQ9NUU7 478 aaKnown RBP12.3□□□□□ -0.44
ARPC1B-216ENST00000474880 RNF19AQ9NV58 838 aa12.3□□□□□ -0.44
ARPC1B-216ENST00000474880 TMEM161AQ9NX61 479 aa12.3□□□□□ -0.44
ARPC1B-216ENST00000474880 DACT1Q9NYF0 836 aa12.3□□□□□ -0.44
ARPC1B-216ENST00000474880 HCSTQ9UBK5 93 aa12.3□□□□□ -0.44
ARPC1B-216ENST00000474880 KIAA1024Q9UPX6 916 aa12.3□□□□□ -0.44
ARPC1B-216ENST00000474880 DNM3Q9UQ16 869 aa12.3□□□□□ -0.44
ARPC1B-216ENST00000474880 MTMR6Q9Y217 621 aa12.3□□□□□ -0.44
ARPC1B-216ENST00000474880 PP2D1A8MPX8 630 aa12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 HOXA2O43364 376 aa12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 FGFR1P11362 822 aa12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 KCNA5P22460 613 aa12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 DNAJB1P25685 340 aa12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 ARL2P36404 184 aa12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 SF3A1Q15459 793 aaKnown RBP12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 ZRSR1Q15695 479 aaKnown RBP12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 IL17AQ16552 155 aa12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 KCTD17Q8N5Z5 321 aa12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 KLHL23Q8NBE8 558 aa12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 SPPL3Q8TCT6 385 aa12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 AK8Q96MA6 479 aa12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 NT5C3AQ9H0P0 336 aa12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 POLR3FQ9H1D9 316 aaPredicted RBP12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 BHMT2Q9H2M3 363 aa12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 ELAC1Q9H777 363 aaKnown RBP12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 IFT122Q9HBG6 1241 aa12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 PIN4Q9Y237 131 aaKnown RBP12.29□□□□□ -0.44
ARPC1B-216ENST00000474880 SLC26A4O43511 780 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 ERLIN2O94905 339 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 CSPG5O95196 566 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 EYA4O95677 639 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 CYP11B2P19099 503 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 CDC25AP30304 524 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 LONP1P36776 959 aaKnown RBP12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 UBA7P41226 1012 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 PTENP60484 403 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 POU5F1BQ06416 359 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 NCBP1Q09161 790 aaKnown RBP12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 CAPSQ13938 189 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 COL19A1Q14993 1142 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 PCBP1Q15365 356 aaKnown RBP eCLIP12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 LEXMQ3ZCV2 418 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 NAALADL2Q58DX5 795 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 TWF2Q6IBS0 349 aaKnown RBP12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 MAEAQ7L5Y9 396 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 ECHDC2Q86YB7 292 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 RASSF8Q8NHQ8 419 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 ASAP3Q8TDY4 903 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 CALML4Q96GE6 196 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 CASD1Q96PB1 797 aa12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 TYW1Q9NV66 732 aaKnown RBP12.28□□□□□ -0.44
ARPC1B-216ENST00000474880 A0A0U1RQF3 1178 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 LRRIQ4A6NIV6 560 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 H3BQ06 376 aaPredicted RBP12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 INO80B-WBP1J3KQ70 363 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 SKIP12755 728 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 ATF7P17544 494 aaPredicted RBP12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 GLRA2P23416 452 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 GTF2F1P35269 517 aaKnown RBP eCLIP12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 RAB27AP51159 221 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 HYAL1Q12794 435 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 PPP2R5AQ15172 486 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 ECM1Q16610 540 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 SPOUT1Q5T280 376 aaKnown RBP12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 LRRC55Q6ZSA7 311 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 ZNF598Q86UK7 904 aaKnown RBP12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 CABP7Q86V35 215 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 ZBTB8OSQ8IWT0 167 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 ABI1Q8IZP0 508 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 RNF169Q8NCN4 708 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 KIFAP3Q92845 792 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 PABPC5Q96DU9 382 aaKnown RBP12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 C2orf40Q9H1Z8 148 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 CWH43Q9H720 699 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 GPRC5CQ9NQ84 441 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 AGPAT5Q9NUQ2 364 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 C5orf42Q9H799 3197 aa12.27□□□□□ -0.45
ARPC1B-216ENST00000474880 E9PMD0 336 aa12.26□□□□□ -0.45
ARPC1B-216ENST00000474880 EOMESO95936 686 aa12.26□□□□□ -0.45
ARPC1B-216ENST00000474880 IRS1P35568 1242 aa12.26□□□□□ -0.45
ARPC1B-216ENST00000474880 LTBRP36941 435 aa12.26□□□□□ -0.45
ARPC1B-216ENST00000474880 CEBPZQ03701 1054 aaKnown RBP12.26□□□□□ -0.45
ARPC1B-216ENST00000474880 CTC1Q2NKJ3 1217 aa12.26□□□□□ -0.45
ARPC1B-216ENST00000474880 CLLU1OSQ5K130 101 aa12.26□□□□□ -0.45
ARPC1B-216ENST00000474880 HYIQ5T013 277 aa12.26□□□□□ -0.45
ARPC1B-216ENST00000474880 FAM173BQ6P4H8 233 aa12.26□□□□□ -0.45
ARPC1B-216ENST00000474880 EP400NLQ6ZTU2 488 aa12.26□□□□□ -0.45
ARPC1B-216ENST00000474880 IFNLR1Q8IU57 520 aaPredicted RBP12.26□□□□□ -0.45
ARPC1B-216ENST00000474880 COLGALT1Q8NBJ5 622 aa12.26□□□□□ -0.45
ARPC1B-216ENST00000474880 SPRYD3Q8NCJ5 442 aa12.26□□□□□ -0.45
ARPC1B-216ENST00000474880 POF1BQ8WVV4 589 aa12.26□□□□□ -0.45
ARPC1B-216ENST00000474880 IFT74Q96LB3 600 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms