RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 NLRP4Q96MN2 994 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 NRDE2Q9H7Z3 1164 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 NCOA5Q9HCD5 579 aaKnown RBP15.73■□□□□ 0.11
CCDC78-209ENST00000474647 CHST12Q9NRB3 414 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 FAM105AQ9NUU6 356 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 DNAJB4Q9UDY4 337 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 EDIL3O43854 480 aa15.72■□□□□ 0.11
CCDC78-209ENST00000474647 TDP2O95551 362 aa15.72■□□□□ 0.11
CCDC78-209ENST00000474647 SSBP05455 408 aaKnown RBP eCLIP15.72■□□□□ 0.11
CCDC78-209ENST00000474647 SKIP12755 728 aa15.72■□□□□ 0.11
CCDC78-209ENST00000474647 NUBP1P53384 320 aa15.72■□□□□ 0.11
CCDC78-209ENST00000474647 GIT2Q14161 759 aa15.72■□□□□ 0.11
CCDC78-209ENST00000474647 NTRK3Q16288 839 aa15.72■□□□□ 0.11
CCDC78-209ENST00000474647 XKR3Q5GH77 459 aa15.72■□□□□ 0.11
CCDC78-209ENST00000474647 NOMO2Q5JPE7 1267 aa15.72■□□□□ 0.11
CCDC78-209ENST00000474647 DDX53Q86TM3 631 aaKnown RBP15.72■□□□□ 0.11
CCDC78-209ENST00000474647 KSR1Q8IVT5 923 aa15.72■□□□□ 0.11
CCDC78-209ENST00000474647 RDM1Q8NG50 284 aa15.72■□□□□ 0.11
CCDC78-209ENST00000474647 FEZF2Q8TBJ5 459 aa15.72■□□□□ 0.11
CCDC78-209ENST00000474647 NIFKQ9BYG3 293 aaKnown RBP15.72■□□□□ 0.11
CCDC78-209ENST00000474647 INO80BQ9C086 356 aaPredicted RBP15.72■□□□□ 0.11
CCDC78-209ENST00000474647 SUCLA2Q9P2R7 463 aaPredicted RBP15.72■□□□□ 0.11
CCDC78-209ENST00000474647 SNX14Q9Y5W7 946 aa15.72■□□□□ 0.11
CCDC78-209ENST00000474647 DOCK6Q96HP0 2047 aa15.72■□□□□ 0.11
CCDC78-209ENST00000474647 DDX11L8A8MPP1 907 aa15.71■□□□□ 0.11
CCDC78-209ENST00000474647 PSMD10O75832 226 aa15.71■□□□□ 0.11
CCDC78-209ENST00000474647 RPS6KB1P23443 525 aa15.71■□□□□ 0.11
CCDC78-209ENST00000474647 RAB27AP51159 221 aa15.71■□□□□ 0.11
CCDC78-209ENST00000474647 POLGP54098 1239 aaPredicted RBP15.71■□□□□ 0.11
CCDC78-209ENST00000474647 CDC42EP1Q00587 391 aa15.71■□□□□ 0.11
CCDC78-209ENST00000474647 PLA2G4FQ68DD2 849 aa15.71■□□□□ 0.11
CCDC78-209ENST00000474647 ZNF410Q86VK4 478 aa15.71■□□□□ 0.11
CCDC78-209ENST00000474647 ZDHHC14Q8IZN3 488 aa15.71■□□□□ 0.11
CCDC78-209ENST00000474647 PLCD3Q8N3E9 789 aa15.71■□□□□ 0.11
CCDC78-209ENST00000474647 FLCNQ8NFG4 579 aa15.71■□□□□ 0.11
CCDC78-209ENST00000474647 URGCPQ8TCY9 931 aa15.71■□□□□ 0.11
CCDC78-209ENST00000474647 SFXN1Q9H9B4 322 aa15.71■□□□□ 0.11
CCDC78-209ENST00000474647 FAM186AA6NE01 2351 aa15.71■□□□□ 0.11
CCDC78-209ENST00000474647 FRYLO94915 3013 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 CARNS1A5YM72 827 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 GALTP07902 379 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 IFNAR1P17181 557 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 SLC11A1P49279 550 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 PTPN14Q15678 1187 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 Q4G0T1 1027 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 ASTLQ6HA08 431 aaPredicted RBP15.7■□□□□ 0.1
CCDC78-209ENST00000474647 CCDC149Q6ZUS6 474 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 PPFIBP1Q86W92 1011 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 TRIM22Q8IYM9 498 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 SLC22A17Q8WUG5 538 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 RSPH1Q8WYR4 309 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 ACSF2Q96CM8 615 aaPredicted RBP15.7■□□□□ 0.1
CCDC78-209ENST00000474647 FAM193BQ96PV7 902 aaPredicted RBP15.7■□□□□ 0.1
CCDC78-209ENST00000474647 CEP89Q96ST8 783 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 SH3GLB2Q9NR46 395 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 CYP26B1Q9NR63 512 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 PCDHA4Q9UN74 947 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 IRAK3Q9Y616 596 aa15.7■□□□□ 0.1
CCDC78-209ENST00000474647 IGKV6-21A0A0C4DH24 114 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 B4GALT3O60512 393 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 MAFO75444 373 aaPredicted RBP15.69■□□□□ 0.1
CCDC78-209ENST00000474647 OFD1O75665 1012 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 STBD1O95210 358 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 KLRC2P26717 231 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 HSPA4P34932 840 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 ASCL5Q7RTU5 278 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 ZNF280BQ86YH2 543 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 PGBD4Q96DM1 585 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 TRAIPQ9BWF2 469 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 VN1R3Q9BXE9 311 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 EMILIN2Q9BXX0 1053 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 C22orf23Q9BZE7 217 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 SLKQ9H2G2 1235 aaPredicted RBP15.69■□□□□ 0.1
CCDC78-209ENST00000474647 BMP2KQ9NSY1 1161 aaPredicted RBP15.69■□□□□ 0.1
CCDC78-209ENST00000474647 USTQ9Y2C2 406 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 PCDHB2Q9Y5E7 798 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 PTPRZ1P23471 2315 aaPredicted RBP15.69■□□□□ 0.1
CCDC78-209ENST00000474647 DCHS1Q96JQ0 3298 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 TRIP11Q15643 1979 aa15.69■□□□□ 0.1
CCDC78-209ENST00000474647 RIF1Q5UIP0 2472 aaKnown RBP15.69■□□□□ 0.1
CCDC78-209ENST00000474647 FANCMQ8IYD8 2048 aa15.68■□□□□ 0.1
CCDC78-209ENST00000474647 DMXL1Q9Y485 3027 aa15.68■□□□□ 0.1
CCDC78-209ENST00000474647 PRR23AA6NEV1 266 aa15.68■□□□□ 0.1
CCDC78-209ENST00000474647 C2CD2LO14523 706 aa15.68■□□□□ 0.1
CCDC78-209ENST00000474647 PDIA3P30101 505 aaKnown RBP15.68■□□□□ 0.1
CCDC78-209ENST00000474647 PSMC5P62195 406 aa15.68■□□□□ 0.1
CCDC78-209ENST00000474647 SSRP1Q08945 709 aaKnown RBP15.68■□□□□ 0.1
CCDC78-209ENST00000474647 ANO5Q75V66 913 aa15.68■□□□□ 0.1
CCDC78-209ENST00000474647 CENPQQ7L2Z9 268 aaPredicted RBP15.68■□□□□ 0.1
CCDC78-209ENST00000474647 BLIDQ8IZY5 108 aa15.68■□□□□ 0.1
CCDC78-209ENST00000474647 ETNPPLQ8TBG4 499 aa15.68■□□□□ 0.1
CCDC78-209ENST00000474647 JPH2Q9BR39 696 aaPredicted RBP15.68■□□□□ 0.1
CCDC78-209ENST00000474647 AGXT2Q9BYV1 514 aa15.68■□□□□ 0.1
CCDC78-209ENST00000474647 RSAD1Q9HA92 442 aa15.68■□□□□ 0.1
CCDC78-209ENST00000474647 AGPAT5Q9NUQ2 364 aa15.68■□□□□ 0.1
CCDC78-209ENST00000474647 PPP4R2Q9NY27 417 aa15.68■□□□□ 0.1
CCDC78-209ENST00000474647 DDX25Q9UHL0 483 aaKnown RBP15.68■□□□□ 0.1
CCDC78-209ENST00000474647 COL4A3BPQ9Y5P4 624 aa15.68■□□□□ 0.1
CCDC78-209ENST00000474647 PROB1E7EW31 1015 aa15.67■□□□□ 0.1
CCDC78-209ENST00000474647 ZNF623O75123 536 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms