RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 BMP6P22004 513 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 SCP2P22307 547 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 THPOP40225 353 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 PRCPP42785 496 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 MNX1P50219 401 aaPredicted RBP9.17□□□□□ -0.94
CNN3-205ENST00000474409 EFNA5P52803 228 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 MRPS6P82932 125 aaKnown RBP9.17□□□□□ -0.94
CNN3-205ENST00000474409 CDC42EP1Q00587 391 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 MAPK6Q16659 721 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 TMEM132AQ24JP5 1023 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 KIZQ2M2Z5 673 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 TRIM60Q495X7 471 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 ZC2HC1CQ53FD0 456 aaPredicted RBP9.17□□□□□ -0.94
CNN3-205ENST00000474409 COBLL1Q53SF7 1204 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 CDCA2Q69YH5 1023 aaPredicted RBP9.17□□□□□ -0.94
CNN3-205ENST00000474409 SLC39A5Q6ZMH5 540 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 ZNF720Q7Z2F6 126 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 FAM126BQ8IXS8 530 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 SYCP3Q8IZU3 236 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 ADSSL1Q8N142 457 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 GUF1Q8N442 669 aaKnown RBP9.17□□□□□ -0.94
CNN3-205ENST00000474409 SLC43A3Q8NBI5 491 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 GLIS3Q8NEA6 775 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 SCFD1Q8WVM8 642 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 NELFBQ8WX92 580 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 BICD1Q96G01 975 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 PAWRQ96IZ0 340 aaKnown RBP9.17□□□□□ -0.94
CNN3-205ENST00000474409 ACCSQ96QU6 501 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 FIZ1Q96SL8 496 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 OSMRQ99650 979 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 TSG101Q99816 390 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 FDXACB1Q9BRP7 624 aaPredicted RBP9.17□□□□□ -0.94
CNN3-205ENST00000474409 INO80BQ9C086 356 aaPredicted RBP9.17□□□□□ -0.94
CNN3-205ENST00000474409 ARHGAP28Q9P2N2 729 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 EXOC7Q9UPT5 735 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 TRPV2Q9Y5S1 764 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 MYH10P35580 1976 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 BICDL2A1A5D9 508 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 TRIM49BA6NDI0 452 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 DCDC2CA8MYV0 355 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 K7ERI5 159 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 HNRNPDLO14979 420 aaKnown RBP9.16□□□□□ -0.94
CNN3-205ENST00000474409 CAND2O75155 1236 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 PPP1R37O75864 691 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 ERLIN2O94905 339 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 CAVIN2O95810 425 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 PRKCBP05771 671 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 COL6A1P12109 1028 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 CD44P16070 742 aaKnown RBP9.16□□□□□ -0.94
CNN3-205ENST00000474409 MATR3P43243 847 aaKnown RBP eCLIP9.16□□□□□ -0.947e-7■□□□□ 11.2
CNN3-205ENST00000474409 STX17P56962 302 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 PTENP60484 403 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 GTF2BQ00403 316 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 SNX17Q15036 470 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 TPD52L1Q16890 204 aaPredicted RBP9.16□□□□□ -0.94
CNN3-205ENST00000474409 BMT2Q1RMZ1 405 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 EPM2AIP1Q7L775 607 aaPredicted RBP9.16□□□□□ -0.94
CNN3-205ENST00000474409 MAP4K3Q8IVH8 894 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 ZNF710Q8N1W2 664 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 NME8Q8N427 588 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 TMEM161BQ8NDZ6 487 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 CAGE1Q8TC20 777 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 FAM200AQ8TCP9 573 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 P2RX5Q93086 422 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 WNT8BQ93098 351 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 DHTKD1Q96HY7 919 aaPredicted RBP9.16□□□□□ -0.94
CNN3-205ENST00000474409 NFKBIZQ9BYH8 718 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 GCOM2Q9BZD3 368 aaPredicted RBP9.16□□□□□ -0.94
CNN3-205ENST00000474409 TRPV6Q9H1D0 765 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 ST6GALNAC4Q9H4F1 302 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 TMEM206Q9H813 350 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 TBX20Q9UMR3 447 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 ATP11BQ9Y2G3 1177 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 CDY2AQ9Y6F7 541 aa9.16□□□□□ -0.94
CNN3-205ENST00000474409 TTC3P53804 2025 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 BECN2A8MW95 431 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 PPP1R3GB7ZBB8 358 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 CALUO43852 315 aaPredicted RBP9.15□□□□□ -0.94
CNN3-205ENST00000474409 GPR32O75388 356 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 EN2P19622 333 aaPredicted RBP9.15□□□□□ -0.94
CNN3-205ENST00000474409 SFPQP23246 707 aaKnown RBP eCLIP9.15□□□□□ -0.94
CNN3-205ENST00000474409 CCNE1P24864 410 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 ERCC5P28715 1186 aaPredicted RBP9.15□□□□□ -0.94
CNN3-205ENST00000474409 ZNF165P49910 485 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 LIG4P49917 911 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 CDK7P50613 346 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 MYL5Q02045 173 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 MBTD1Q05BQ5 628 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 LRRC63Q05C16 580 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 POU5F1BQ06416 359 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 BFSP2Q13515 415 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 KNOP1Q1ED39 458 aaKnown RBP9.15□□□□□ -0.94
CNN3-205ENST00000474409 CT47A1Q5JQC4 288 aaPredicted RBP9.15□□□□□ -0.94
CNN3-205ENST00000474409 C1orf53Q5VUE5 145 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 PPP4R3CPQ6ZMV5 832 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 HS2ST1Q7LGA3 356 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 CATSPER4Q7RTX7 472 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 SRGAP1Q7Z6B7 1085 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 RPAINQ86UA6 219 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 AOPEPQ8N6M6 819 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms