RNA–Protein interactions for RNA: ENST00000474000.5

COL16A1-210, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-210ENST00000474000 SIGLEC14Q08ET2 396 aa13.47□□□□□ -0.25
COL16A1-210ENST00000474000 SMC1AQ14683 1233 aaKnown RBP13.47□□□□□ -0.25
COL16A1-210ENST00000474000 PIK3AP1Q6ZUJ8 805 aa13.47□□□□□ -0.25
COL16A1-210ENST00000474000 CATSPER4Q7RTX7 472 aa13.47□□□□□ -0.25
COL16A1-210ENST00000474000 PRPF31Q8WWY3 499 aaKnown RBP13.47□□□□□ -0.25
COL16A1-210ENST00000474000 SLC7A3Q8WY07 619 aa13.47□□□□□ -0.25
COL16A1-210ENST00000474000 HAS1Q92839 578 aa13.47□□□□□ -0.25
COL16A1-210ENST00000474000 LPPQ93052 612 aa13.47□□□□□ -0.25
COL16A1-210ENST00000474000 ASIC4Q96FT7 647 aa13.47□□□□□ -0.25
COL16A1-210ENST00000474000 CEP170P1Q96L14 293 aa13.47□□□□□ -0.25
COL16A1-210ENST00000474000 PRRX2Q99811 253 aa13.47□□□□□ -0.25
COL16A1-210ENST00000474000 IFT122Q9HBG6 1241 aa13.47□□□□□ -0.25
COL16A1-210ENST00000474000 FAM105AQ9NUU6 356 aa13.47□□□□□ -0.25
COL16A1-210ENST00000474000 FAM86C1Q9NVL1 165 aa13.47□□□□□ -0.25
COL16A1-210ENST00000474000 WRAP73Q9P2S5 460 aaPredicted RBP13.47□□□□□ -0.25
COL16A1-210ENST00000474000 TPCN1Q9ULQ1 816 aa13.47□□□□□ -0.25
COL16A1-210ENST00000474000 MEIS3P2A8K0S8 358 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 TBX3O15119 743 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 MARCH6O60337 910 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 CLASP2O75122 1294 aaKnown RBP13.46□□□□□ -0.25
COL16A1-210ENST00000474000 OFD1O75665 1012 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 SRGAP2CP0DJJ0 459 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 GCFC2P16383 781 aaKnown RBP13.46□□□□□ -0.25
COL16A1-210ENST00000474000 AVPR2P30518 371 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 BMS1Q14692 1282 aaKnown RBP13.46□□□□□ -0.25
COL16A1-210ENST00000474000 EPHA7Q15375 998 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 GLB1LQ6UWU2 654 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 VPS52Q8N1B4 723 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 RSPH1Q8WYR4 309 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 CASP10Q92851 521 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 TMEM143Q96AN5 459 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 TMEM169Q96HH4 297 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 DHX33Q9H6R0 707 aaKnown RBP13.46□□□□□ -0.25
COL16A1-210ENST00000474000 TBC1D13Q9NVG8 400 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 RGL1Q9NZL6 768 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 COL4A3BPQ9Y5P4 624 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 HCFC2Q9Y5Z7 792 aa13.46□□□□□ -0.25
COL16A1-210ENST00000474000 STK36Q9NRP7 1315 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 ZC3H11AO75152 810 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL16A1-210ENST00000474000 CTDNEP1O95476 244 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 GALTP07902 379 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 SP100P23497 879 aaPredicted RBP13.45□□□□□ -0.26
COL16A1-210ENST00000474000 YWHABP31946 246 aaKnown RBP13.45□□□□□ -0.26
COL16A1-210ENST00000474000 CA8P35219 290 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 RAB27AP51159 221 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 POLGP54098 1239 aaPredicted RBP13.45□□□□□ -0.26
COL16A1-210ENST00000474000 RNASELQ05823 741 aaKnown RBP13.45□□□□□ -0.26
COL16A1-210ENST00000474000 TPRNQ4KMQ1 711 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 NOMO2Q5JPE7 1267 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 EARS2Q5JPH6 523 aaKnown RBP13.45□□□□□ -0.26
COL16A1-210ENST00000474000 OTUD6AQ7L8S5 288 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 DDX53Q86TM3 631 aaKnown RBP13.45□□□□□ -0.26
COL16A1-210ENST00000474000 TMEM173Q86WV6 379 aaPredicted RBP13.45□□□□□ -0.26
COL16A1-210ENST00000474000 C4orf19Q8IY42 314 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 EXOC8Q8IYI6 725 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 PGBD4Q96DM1 585 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 IGSF21Q96ID5 467 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 SNX27Q96L92 541 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 NAP1L4Q99733 375 aaKnown RBP13.45□□□□□ -0.26
COL16A1-210ENST00000474000 ADAM7Q9H2U9 754 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 NRDE2Q9H7Z3 1164 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 INPP5FQ9Y2H2 1132 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 PPME1Q9Y570 386 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 PCDHB2Q9Y5E7 798 aa13.45□□□□□ -0.26
COL16A1-210ENST00000474000 DMDP11532 3685 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 FNDC1Q4ZHG4 1894 aaPredicted RBP13.44□□□□□ -0.26
COL16A1-210ENST00000474000 MYO15AQ9UKN7 3530 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 ZBTB39O15060 712 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 ST18O60284 1047 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 PDGFBP01127 241 aaPredicted RBP13.44□□□□□ -0.26
COL16A1-210ENST00000474000 FDPSP14324 419 aaKnown RBP13.44□□□□□ -0.26
COL16A1-210ENST00000474000 HOXA11P31270 313 aaPredicted RBP13.44□□□□□ -0.26
COL16A1-210ENST00000474000 RFC5P40937 340 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 ITIH3Q06033 890 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 LAMTOR4Q0VGL1 99 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 PTPN21Q16825 1174 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 CES5AQ6NT32 575 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 SRGAP1Q7Z6B7 1085 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 MRPL10Q7Z7H8 261 aaKnown RBP13.44□□□□□ -0.26
COL16A1-210ENST00000474000 ZNF280BQ86YH2 543 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 POTEDQ86YR6 584 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 TMEM87AQ8NBN3 555 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 PSPC1Q8WXF1 523 aaKnown RBP13.44□□□□□ -0.26
COL16A1-210ENST00000474000 AUTS2Q8WXX7 1259 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 WASF1Q92558 559 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 DYDC2Q96IM9 177 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 LXNQ9BS40 222 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 ZBP1Q9H171 429 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 ZSWIM4Q9H7M6 989 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 MINDY3Q9H8M7 445 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 AGPAT5Q9NUQ2 364 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 PPP4R2Q9NY27 417 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 ORC3Q9UBD5 711 aaPredicted RBP13.44□□□□□ -0.26
COL16A1-210ENST00000474000 DNAJB4Q9UDY4 337 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 CDH22Q9UJ99 828 aa13.44□□□□□ -0.26
COL16A1-210ENST00000474000 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.43□□□□□ -0.26
COL16A1-210ENST00000474000 CARNS1A5YM72 827 aa13.43□□□□□ -0.26
COL16A1-210ENST00000474000 FAM205CA6NFA0 338 aa13.43□□□□□ -0.26
COL16A1-210ENST00000474000 ASAP2O43150 1006 aa13.43□□□□□ -0.26
COL16A1-210ENST00000474000 SLITRK3O94933 977 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms