RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 CBX2Q14781 532 aaPredicted RBP14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 ZNF174Q15697 407 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 PAN2Q504Q3 1202 aaKnown RBP14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 XKR9Q5GH70 373 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 SLC24A5Q71RS6 500 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 TPH2Q8IWU9 490 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 CMTR2Q8IYT2 770 aaKnown RBP14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 CRIPAKQ8N1N5 446 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 FBXL6Q8N531 539 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 ERMNQ8TAM6 284 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 TCP11Q8WWU5 503 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 NLRP7Q8WX94 980 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 RPGRIP1Q96KN7 1286 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 SH2D3AQ9BRG2 576 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 GCOM2Q9BZD3 368 aaPredicted RBP14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 INO80BQ9C086 356 aaPredicted RBP14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 TUFT1Q9NNX1 390 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 RGS18Q9NS28 235 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 ANKEF1Q9NU02 776 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 BARX2Q9UMQ3 279 aaPredicted RBP14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 USP15Q9Y4E8 981 aaPredicted RBP14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 PCDHGC5Q9Y5F6 944 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 FNDC1Q4ZHG4 1894 aaPredicted RBP14.46□□□□□ -0.1
SHROOM3-204ENST00000473602 H3BQV1 296 aa14.45□□□□□ -0.1
SHROOM3-204ENST00000473602 LAD1O00515 517 aa14.45□□□□□ -0.1
SHROOM3-204ENST00000473602 XRCC6P12956 609 aaKnown RBP eCLIP14.45□□□□□ -0.1
SHROOM3-204ENST00000473602 DRP2Q13474 957 aa14.45□□□□□ -0.1
SHROOM3-204ENST00000473602 CUL4AQ13619 759 aa14.45□□□□□ -0.1
SHROOM3-204ENST00000473602 RILPL1Q5EBL4 403 aa14.45□□□□□ -0.1
SHROOM3-204ENST00000473602 ADAM2Q99965 735 aa14.45□□□□□ -0.1
SHROOM3-204ENST00000473602 PHF7Q9BWX1 381 aaPredicted RBP14.45□□□□□ -0.1
SHROOM3-204ENST00000473602 FAM86C1Q9NVL1 165 aa14.45□□□□□ -0.1
SHROOM3-204ENST00000473602 SUCLA2Q9P2R7 463 aaPredicted RBP14.45□□□□□ -0.1
SHROOM3-204ENST00000473602 KIAA1671Q9BY89 1806 aa14.45□□□□□ -0.1
SHROOM3-204ENST00000473602 PTPRZ1P23471 2315 aaPredicted RBP14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 C9IYK1 514 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 PER2O15055 1255 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 ZSCAN20P17040 1043 aaPredicted RBP14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 MUTP22033 750 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 SFPQP23246 707 aaKnown RBP eCLIP14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 GATMP50440 423 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 FXR2P51116 673 aaKnown RBP eCLIP14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 SIGLEC14Q08ET2 396 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 DSC3Q14574 896 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 EMC2Q15006 297 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 HAUS3Q68CZ6 603 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 MCTP1Q6DN14 999 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 RHPN2Q8IUC4 686 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 MICAL1Q8TDZ2 1067 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 PSPC1Q8WXF1 523 aaKnown RBP14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 CCDC43Q96MW1 224 aaKnown RBP14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 MTRQ99707 1265 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 POLR3CQ9BUI4 534 aaPredicted RBP14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 RAB34Q9BZG1 259 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 ELAC1Q9H777 363 aaKnown RBP14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 TLE6Q9H808 572 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 LRFN2Q9ULH4 789 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 PCDHB7Q9Y5E2 793 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 COL4A3BPQ9Y5P4 624 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 STK24Q9Y6E0 443 aa14.44□□□□□ -0.1
SHROOM3-204ENST00000473602 A0A087WZ62 844 aa14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 ASAP2O43150 1006 aa14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 MGEA5O60502 916 aa14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 GFRA3O60609 400 aa14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 DGAT1O75907 488 aa14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 IBSPP21815 317 aaPredicted RBP14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 RPA1P27694 616 aa14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 PRPHP41219 470 aa14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 TECP42680 631 aa14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 TOB1P50616 345 aaPredicted RBP14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 VCPP55072 806 aaKnown RBP14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 RBM10P98175 930 aaKnown RBP14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 C4orf32Q8N8J7 132 aa14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 ZNF579Q8NAF0 562 aaKnown RBP14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 FDXACB1Q9BRP7 624 aaPredicted RBP14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 CHST12Q9NRB3 414 aa14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 TMEM161AQ9NX61 479 aa14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 DACT1Q9NYF0 836 aa14.43□□□□□ -0.1
SHROOM3-204ENST00000473602 MYO15AQ9UKN7 3530 aa14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 SPATA31C1P0DKV0 1188 aa14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 PDCP20941 246 aa14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 AVPR2P30518 371 aa14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 RARRES1P49788 294 aa14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 FAM189BP81408 668 aa14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 PTGDRQ13258 359 aa14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 PDIA5Q14554 519 aa14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 MXD4Q14582 209 aaPredicted RBP14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 LARP1BQ659C4 914 aaKnown RBP14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 CATSPER3Q86XQ3 398 aa14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 ATOH1Q92858 354 aaPredicted RBP14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 ASIC4Q96FT7 647 aa14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 ZNF668Q96K58 619 aaPredicted RBP14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 NLRP4Q96MN2 994 aa14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 NACC1Q96RE7 527 aa14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 ATP6V0A4Q9HBG4 840 aa14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 DBR1Q9UK59 544 aaKnown RBP14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 PCDHB6Q9Y5E3 794 aa14.42□□□□□ -0.1
SHROOM3-204ENST00000473602 ZBTB39O15060 712 aa14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 HOXA2O43364 376 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms