RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 CASQ1P31415 396 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 ZNF157P51786 506 aaPredicted RBP6.8□□□□□ -1.32
CLK1-210ENST00000473565 IGBP1P78318 339 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 ZNF792Q3KQV3 632 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 SEZ6Q53EL9 994 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 SFMBT2Q5VUG0 894 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 LMBRD2Q68DH5 695 aaPredicted RBP6.8□□□□□ -1.32
CLK1-210ENST00000473565 IQCEQ6IPM2 695 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 GBP6Q6ZN66 633 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 GPR142Q7Z601 462 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 ANKRD23Q86SG2 305 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 MAP4K3Q8IVH8 894 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 XXYLT1Q8NBI6 393 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 MCPH1Q8NEM0 835 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 PPP1R16BQ96T49 567 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 DHX33Q9H6R0 707 aaKnown RBP6.8□□□□□ -1.32
CLK1-210ENST00000473565 AZI2Q9H6S1 392 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 IVNS1ABPQ9Y6Y0 642 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 MYH10P35580 1976 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 GOLGA6L9A6NEM1 432 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 KIF2AO00139 706 aaPredicted RBP6.79□□□□□ -1.32
CLK1-210ENST00000473565 KIF5CO60282 957 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 TGFB3P10600 412 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 HARSP12081 509 aaKnown RBP6.79□□□□□ -1.32
CLK1-210ENST00000473565 HNRNPH3P31942 346 aaKnown RBP6.79□□□□□ -1.32
CLK1-210ENST00000473565 CYLC1P35663 651 aaPredicted RBP6.79□□□□□ -1.32
CLK1-210ENST00000473565 CHMP4BP1P59074 171 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 CCNA1P78396 465 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 IRX5P78411 483 aaPredicted RBP6.79□□□□□ -1.32
CLK1-210ENST00000473565 MYL7Q01449 175 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 NFIL3Q16649 462 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 PRAMEF19Q5SWL8 479 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 CCDC122Q5T0U0 273 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 TAPT1Q6NXT6 567 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 DPP9Q86TI2 863 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 SHCBP1Q8NEM2 672 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 GOLGA5Q8TBA6 731 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 SLC7A3Q8WY07 619 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 POMGNT1Q8WZA1 660 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 JAKMIP2Q96AA8 810 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 LENG1Q96BZ8 264 aaPredicted RBP6.79□□□□□ -1.32
CLK1-210ENST00000473565 IFT74Q96LB3 600 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 SPAG5Q96R06 1193 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 TIPINQ9BVW5 301 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 PHLPP2Q6ZVD8 1323 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 ZBTB42B2RXF5 422 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 EIF3CLB5ME19 914 aaKnown RBP6.79□□□□□ -1.32
CLK1-210ENST00000473565 ENC1O14682 589 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 SNAI1O95863 264 aaPredicted RBP6.79□□□□□ -1.32
CLK1-210ENST00000473565 ZNF286BP0CG31 522 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 SRGAP2CP0DJJ0 459 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 KRT13P13646 458 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 COPB2P35606 906 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 VAMP7P51809 220 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 WNT7BP56706 349 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 MAP2K1Q02750 393 aaPredicted RBP6.79□□□□□ -1.32
CLK1-210ENST00000473565 MKRN4PQ13434 485 aaPredicted RBP6.79□□□□□ -1.32
CLK1-210ENST00000473565 CAPSQ13938 189 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 PLCB4Q15147 1175 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 TARBP2Q15633 366 aaKnown RBP6.79□□□□□ -1.32
CLK1-210ENST00000473565 SNRNP35Q16560 246 aaKnown RBP6.79□□□□□ -1.32
CLK1-210ENST00000473565 ARHGAP44Q17R89 818 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 ZBTB41Q5SVQ8 909 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 SLC9A9Q8IVB4 645 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 SPIRE2Q8WWL2 714 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 PRPF31Q8WWY3 499 aaKnown RBP6.79□□□□□ -1.32
CLK1-210ENST00000473565 KAT5Q92993 513 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 EIF3CQ99613 913 aaKnown RBP6.79□□□□□ -1.32
CLK1-210ENST00000473565 MKNK1Q9BUB5 465 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.79□□□□□ -1.32
CLK1-210ENST00000473565 HAPLN2Q9GZV7 340 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 MAF1Q9H063 256 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 RNPEPQ9H4A4 650 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 ST6GALNAC4Q9H4F1 302 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 HAUS4Q9H6D7 363 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 ANKFY1Q9P2R3 1169 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 TRPC6Q9Y210 931 aa6.79□□□□□ -1.32
CLK1-210ENST00000473565 ADCY6O43306 1168 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 CSDE1O75534 798 aaKnown RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 GFPT2O94808 682 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 DLATP10515 647 aaKnown RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 ARL2P36404 184 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 ACOT2P49753 483 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 TERF1P54274 439 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 FKBP1BP68106 108 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 ARHGAP1Q07960 439 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 ALCAMQ13740 583 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 TTLL4Q14679 1199 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 ASIC2Q16515 512 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 FAM160B1Q5W0V3 765 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 MAMDC4Q6UXC1 1216 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.78□□□□□ -1.32
CLK1-210ENST00000473565 CDR2LQ86X02 465 aaPredicted RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 RASAL3Q86YV0 1011 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 NPLOC4Q8TAT6 608 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 AFG1LQ8WV93 481 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 ZIC5Q96T25 663 aa6.78□□□□□ -1.32
CLK1-210ENST00000473565 PARK7Q99497 189 aaKnown RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 MPHOSPH6Q99547 160 aaKnown RBP6.78□□□□□ -1.32
CLK1-210ENST00000473565 FAM213AQ9BRX8 229 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms