RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 JPH2Q9BR39 696 aaPredicted RBP20.1■□□□□ 0.81
SNX4-204ENST00000473417 FDXACB1Q9BRP7 624 aaPredicted RBP20.1■□□□□ 0.81
SNX4-204ENST00000473417 RAB34Q9BZG1 259 aa20.1■□□□□ 0.81
SNX4-204ENST00000473417 SUCLA2Q9P2R7 463 aaPredicted RBP20.1■□□□□ 0.81
SNX4-204ENST00000473417 PPME1Q9Y570 386 aa20.1■□□□□ 0.81
SNX4-204ENST00000473417 CLIC4Q9Y696 253 aa20.1■□□□□ 0.81
SNX4-204ENST00000473417 A0A0U1RQF3 1178 aa20.09■□□□□ 0.81
SNX4-204ENST00000473417 VWA3AA6NCI4 1184 aa20.09■□□□□ 0.81
SNX4-204ENST00000473417 PP2D1A8MPX8 630 aa20.09■□□□□ 0.81
SNX4-204ENST00000473417 LINC01565O15544 149 aa20.09■□□□□ 0.81
SNX4-204ENST00000473417 CSDE1O75534 798 aaKnown RBP20.09■□□□□ 0.81
SNX4-204ENST00000473417 LYPLA2O95372 231 aa20.09■□□□□ 0.81
SNX4-204ENST00000473417 PDIA4P13667 645 aaKnown RBP20.09■□□□□ 0.81
SNX4-204ENST00000473417 ATF7P17544 494 aaPredicted RBP20.09■□□□□ 0.81
SNX4-204ENST00000473417 LAG3P18627 525 aa20.09■□□□□ 0.81
SNX4-204ENST00000473417 CCT6AP40227 531 aaKnown RBP20.09■□□□□ 0.81
SNX4-204ENST00000473417 CEBPZQ03701 1054 aaKnown RBP20.09■□□□□ 0.81
SNX4-204ENST00000473417 DLX2Q07687 328 aaPredicted RBP20.09■□□□□ 0.81
SNX4-204ENST00000473417 ZNF598Q86UK7 904 aaKnown RBP20.09■□□□□ 0.81
SNX4-204ENST00000473417 RHPN2Q8IUC4 686 aa20.09■□□□□ 0.81
SNX4-204ENST00000473417 LRRC43Q8N309 656 aa20.09■□□□□ 0.81
SNX4-204ENST00000473417 IGSF22Q8N9C0 903 aa20.09■□□□□ 0.81
SNX4-204ENST00000473417 PIGOQ8TEQ8 1089 aa20.09■□□□□ 0.81
SNX4-204ENST00000473417 KHSRPQ92945 711 aaKnown RBP eCLIP20.09■□□□□ 0.816e-7■■■■□ 21.8
SNX4-204ENST00000473417 POLR3CQ9BUI4 534 aaPredicted RBP20.09■□□□□ 0.81
SNX4-204ENST00000473417 EPHX3Q9H6B9 360 aa20.09■□□□□ 0.81
SNX4-204ENST00000473417 TUFT1Q9NNX1 390 aa20.09■□□□□ 0.81
SNX4-204ENST00000473417 DACT1Q9NYF0 836 aa20.09■□□□□ 0.81
SNX4-204ENST00000473417 FGF18O76093 207 aa20.08■□□□□ 0.81
SNX4-204ENST00000473417 BMP15O95972 392 aa20.08■□□□□ 0.81
SNX4-204ENST00000473417 ZSCAN22P10073 491 aaPredicted RBP20.08■□□□□ 0.81
SNX4-204ENST00000473417 SFPQP23246 707 aaKnown RBP eCLIP20.08■□□□□ 0.81
SNX4-204ENST00000473417 RPA1P27694 616 aa20.08■□□□□ 0.81
SNX4-204ENST00000473417 CDC25AP30304 524 aa20.08■□□□□ 0.81
SNX4-204ENST00000473417 ADAM15Q13444 863 aa20.08■□□□□ 0.81
SNX4-204ENST00000473417 CLLU1OSQ5K130 101 aa20.08■□□□□ 0.81
SNX4-204ENST00000473417 ARL6IP4Q66PJ3 421 aaKnown RBP20.08■□□□□ 0.81
SNX4-204ENST00000473417 HAUS3Q68CZ6 603 aa20.08■□□□□ 0.81
SNX4-204ENST00000473417 LRRC55Q6ZSA7 311 aa20.08■□□□□ 0.81
SNX4-204ENST00000473417 ABI1Q8IZP0 508 aa20.08■□□□□ 0.81
SNX4-204ENST00000473417 SNX29Q8TEQ0 813 aa20.08■□□□□ 0.81
SNX4-204ENST00000473417 SLC7A3Q8WY07 619 aa20.08■□□□□ 0.81
SNX4-204ENST00000473417 DHX33Q9H6R0 707 aaKnown RBP20.08■□□□□ 0.81
SNX4-204ENST00000473417 CHST12Q9NRB3 414 aa20.08■□□□□ 0.81
SNX4-204ENST00000473417 BMP2KQ9NSY1 1161 aaPredicted RBP20.08■□□□□ 0.81
SNX4-204ENST00000473417 FAM50BQ9Y247 325 aa20.08■□□□□ 0.81
SNX4-204ENST00000473417 EOMESO95936 686 aa20.07■□□□□ 0.8
SNX4-204ENST00000473417 RFC5P40937 340 aa20.07■□□□□ 0.8
SNX4-204ENST00000473417 KRT79Q5XKE5 535 aa20.07■□□□□ 0.8
SNX4-204ENST00000473417 POTEGQ6S5H5 508 aa20.07■□□□□ 0.8
SNX4-204ENST00000473417 KSR1Q8IVT5 923 aa20.07■□□□□ 0.8
SNX4-204ENST00000473417 THNSL1Q8IYQ7 743 aa20.07■□□□□ 0.8
SNX4-204ENST00000473417 EFHBQ8N7U6 833 aa20.07■□□□□ 0.8
SNX4-204ENST00000473417 NLRP4Q96MN2 994 aa20.07■□□□□ 0.8
SNX4-204ENST00000473417 USP28Q96RU2 1077 aa20.07■□□□□ 0.8
SNX4-204ENST00000473417 TRAIPQ9BWF2 469 aa20.07■□□□□ 0.8
SNX4-204ENST00000473417 INO80BQ9C086 356 aaPredicted RBP20.07■□□□□ 0.8
SNX4-204ENST00000473417 IGFLR1Q9H665 355 aa20.07■□□□□ 0.8
SNX4-204ENST00000473417 TLR9Q9NR96 1032 aa20.07■□□□□ 0.8
SNX4-204ENST00000473417 ANKEF1Q9NU02 776 aa20.07■□□□□ 0.8
SNX4-204ENST00000473417 PCDHGC5Q9Y5F6 944 aa20.07■□□□□ 0.8
SNX4-204ENST00000473417 COL4A3BPQ9Y5P4 624 aa20.07■□□□□ 0.8
SNX4-204ENST00000473417 TRIOO75962 3097 aa20.06■□□□□ 0.8
SNX4-204ENST00000473417 F13A1P00488 732 aa20.06■□□□□ 0.8
SNX4-204ENST00000473417 POLGP54098 1239 aaPredicted RBP20.06■□□□□ 0.8
SNX4-204ENST00000473417 PLCB3Q01970 1234 aa20.06■□□□□ 0.8
SNX4-204ENST00000473417 PTPAQ15257 358 aa20.06■□□□□ 0.8
SNX4-204ENST00000473417 ECM1Q16610 540 aa20.06■□□□□ 0.8
SNX4-204ENST00000473417 FOXD4L6Q3SYB3 417 aaPredicted RBP20.06■□□□□ 0.8
SNX4-204ENST00000473417 FOXD4L3Q6VB84 417 aaPredicted RBP20.06■□□□□ 0.8
SNX4-204ENST00000473417 EXOC8Q8IYI6 725 aa20.06■□□□□ 0.8
SNX4-204ENST00000473417 GJD3Q8N144 294 aa20.06■□□□□ 0.8
SNX4-204ENST00000473417 RNF169Q8NCN4 708 aa20.06■□□□□ 0.8
SNX4-204ENST00000473417 CCDC43Q96MW1 224 aaKnown RBP20.06■□□□□ 0.8
SNX4-204ENST00000473417 IFT122Q9HBG6 1241 aa20.06■□□□□ 0.8
SNX4-204ENST00000473417 PRKAG3Q9UGI9 489 aa20.06■□□□□ 0.8
SNX4-204ENST00000473417 LZTS1Q9Y250 596 aa20.06■□□□□ 0.8
SNX4-204ENST00000473417 STK24Q9Y6E0 443 aa20.06■□□□□ 0.8
SNX4-204ENST00000473417 TDRD15B5MCY1 1934 aaKnown RBP20.06■□□□□ 0.8
SNX4-204ENST00000473417 MBTPS2O43462 519 aa20.05■□□□□ 0.8
SNX4-204ENST00000473417 GAS2O43903 313 aaKnown RBP20.05■□□□□ 0.8
SNX4-204ENST00000473417 XRCC6P12956 609 aaKnown RBP eCLIP20.05■□□□□ 0.8
SNX4-204ENST00000473417 MARCKSP29966 332 aaPredicted RBP20.05■□□□□ 0.8
SNX4-204ENST00000473417 PHKA2P46019 1235 aa20.05■□□□□ 0.8
SNX4-204ENST00000473417 NRIP1P48552 1158 aa20.05■□□□□ 0.8
SNX4-204ENST00000473417 RARRES1P49788 294 aa20.05■□□□□ 0.8
SNX4-204ENST00000473417 GRIN1Q05586 938 aa20.05■□□□□ 0.8
SNX4-204ENST00000473417 ZP2Q05996 745 aa20.05■□□□□ 0.8
SNX4-204ENST00000473417 ZRSR1Q15695 479 aaKnown RBP20.05■□□□□ 0.8
SNX4-204ENST00000473417 CLUL1Q15846 466 aa20.05■□□□□ 0.8
SNX4-204ENST00000473417 KCNT2Q6UVM3 1135 aa20.05■□□□□ 0.8
SNX4-204ENST00000473417 HELQQ8TDG4 1101 aa20.05■□□□□ 0.8
SNX4-204ENST00000473417 PSPC1Q8WXF1 523 aaKnown RBP20.05■□□□□ 0.8
SNX4-204ENST00000473417 MSLNLQ96KJ4 702 aa20.05■□□□□ 0.8
SNX4-204ENST00000473417 ZNF558Q96NG5 402 aa20.05■□□□□ 0.8
SNX4-204ENST00000473417 NACC1Q96RE7 527 aa20.05■□□□□ 0.8
SNX4-204ENST00000473417 TFIP11Q9UBB9 837 aaKnown RBP20.05■□□□□ 0.8
SNX4-204ENST00000473417 DAXXQ9UER7 740 aaPredicted RBP20.05■□□□□ 0.8
SNX4-204ENST00000473417 RAPGEFL1Q9UHV5 662 aa20.05■□□□□ 0.8
SNX4-204ENST00000473417 KIAA1024Q9UPX6 916 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms