RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 GIPRP48546 466 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 RARSP54136 660 aaKnown RBP4.21□□□□□ -1.74
XRN1-209ENST00000472625 GRB14Q14449 540 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 RAB3GAP1Q15042 981 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 ABCB5Q2M3G0 1257 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 CERKLQ49MI3 558 aaPredicted RBP4.21□□□□□ -1.74
XRN1-209ENST00000472625 TNNI3KQ59H18 835 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 WDR78Q5VTH9 848 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 ZKSCAN2Q63HK3 967 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 OLFML2BQ68BL8 750 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 TATDN1Q6P1N9 297 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 SPOCD1Q6ZMY3 1216 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 CCDC81Q6ZN84 652 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 SYDE1Q6ZW31 735 aaPredicted RBP4.21□□□□□ -1.74
XRN1-209ENST00000472625 MAPKAPK5Q8IW41 473 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 PHACTR4Q8IZ21 702 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 TRMT2AQ8IZ69 625 aaKnown RBP4.21□□□□□ -1.74
XRN1-209ENST00000472625 FAM169BQ8N8A8 192 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 SHCBP1Q8NEM2 672 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 SH3RF3Q8TEJ3 882 aaPredicted RBP4.21□□□□□ -1.74
XRN1-209ENST00000472625 DIS3LQ8TF46 1054 aaKnown RBP4.21□□□□□ -1.74
XRN1-209ENST00000472625 TGFBRAP1Q8WUH2 860 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 EDC3Q96F86 508 aaKnown RBP4.21□□□□□ -1.74
XRN1-209ENST00000472625 FAM84AQ96KN4 292 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 SLC6A18Q96N87 628 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 PAGR1Q9BTK6 254 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 TGIF2Q9GZN2 237 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 KIAA1683Q9H0B3 1180 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 MROH8Q9H579 483 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 NSUN3Q9H649 340 aaKnown RBP4.21□□□□□ -1.74
XRN1-209ENST00000472625 HOXC10Q9NYD6 342 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 SWAP70Q9UH65 585 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 DDX20Q9UHI6 824 aaKnown RBP4.21□□□□□ -1.74
XRN1-209ENST00000472625 ZMYND8Q9ULU4 1186 aaPredicted RBP4.21□□□□□ -1.74
XRN1-209ENST00000472625 FPGT-TNNI3KV9GXZ4 949 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 PFASO15067 1338 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 MROH7Q68CQ1 1323 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 EYSQ5T1H1 3165 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 DNAH12Q6ZR08 3092 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 TMEM82A0PJX8 343 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 SEPT4O43236 478 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 HMMRO75330 724 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 SURF6O75683 361 aaKnown RBP4.2□□□□□ -1.74
XRN1-209ENST00000472625 IDH1O75874 414 aaKnown RBP4.2□□□□□ -1.74
XRN1-209ENST00000472625 SLC25A27O95847 323 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 GH2P01242 217 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 TRIM27P14373 513 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 RAG1P15918 1043 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 VCAM1P19320 739 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 MCM4P33991 863 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 GDNFP39905 211 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 CCNFP41002 786 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 TEKQ02763 1124 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 CACNB2Q08289 660 aaPredicted RBP4.2□□□□□ -1.74
XRN1-209ENST00000472625 TIGD5Q53EQ6 642 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 TMEM179Q6ZVK1 233 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 TMPRSS7Q7RTY8 843 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 RNF180Q86T96 592 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 DPP9Q86TI2 863 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 MSL3Q8N5Y2 521 aaKnown RBP4.2□□□□□ -1.74
XRN1-209ENST00000472625 USP6NLQ92738 828 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 GPRASP2Q96D09 838 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 P2RX7Q99572 595 aaKnown RBP4.2□□□□□ -1.74
XRN1-209ENST00000472625 TINF2Q9BSI4 451 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 CRNKL1Q9BZJ0 848 aaKnown RBP4.2□□□□□ -1.74
XRN1-209ENST00000472625 TANGO6Q9C0B7 1094 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.2□□□□□ -1.742e-8■■■□□ 15
XRN1-209ENST00000472625 PRDM14Q9GZV8 571 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.2□□□□□ -1.74
XRN1-209ENST00000472625 ADAMTS10Q9H324 1103 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 ZNF287Q9HBT7 754 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 PCDHA11Q9Y5I1 949 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 CUL9Q8IWT3 2517 aa4.2□□□□□ -1.74
XRN1-209ENST00000472625 MYH2Q9UKX2 1941 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 ZSWIM8A7E2V4 1837 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 ZNF236Q9UL36 1845 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 WDR46O15213 610 aaKnown RBP4.19□□□□□ -1.74
XRN1-209ENST00000472625 CBFA2T2O43439 604 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 ZGLP1P0C6A0 271 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 C1QTNF9P0C862 333 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 RARBP10826 455 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 FCER1AP12319 257 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 CYBAP13498 195 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 SYN1P17600 705 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 CNGA1P29973 690 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 SMAD3P84022 425 aaKnown RBP4.19□□□□□ -1.74
XRN1-209ENST00000472625 KCTD2Q14681 263 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 COG2Q14746 738 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 SNX17Q15036 470 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 LRRFIP1Q32MZ4 808 aaKnown RBP4.19□□□□□ -1.74
XRN1-209ENST00000472625 BBS9Q3SYG4 887 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 ZSCAN25Q6NSZ9 544 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 UNC5AQ6ZN44 842 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 CATSPERGQ6ZRH7 1159 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 CILP2Q8IUL8 1156 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 ITPRIPQ8IWB1 547 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 CLASRPQ8N2M8 674 aaKnown RBP4.19□□□□□ -1.74
XRN1-209ENST00000472625 MAGEB6Q8N7X4 407 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 ZNF513Q8N8E2 541 aaPredicted RBP4.19□□□□□ -1.74
XRN1-209ENST00000472625 SSH3Q8TE77 659 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms