RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 ANKRD23Q86SG2 305 aa8.41□□□□□ -1.06
SCAF4-205ENST00000472318 FMNL3Q8IVF7 1028 aa8.41□□□□□ -1.06
SCAF4-205ENST00000472318 RPUSD2Q8IZ73 545 aaKnown RBP8.41□□□□□ -1.06
SCAF4-205ENST00000472318 JMJD8Q96S16 334 aa8.41□□□□□ -1.06
SCAF4-205ENST00000472318 COA1Q9GZY4 146 aa8.41□□□□□ -1.06
SCAF4-205ENST00000472318 EPHX3Q9H6B9 360 aa8.41□□□□□ -1.06
SCAF4-205ENST00000472318 KLHL14Q9P2G3 628 aa8.41□□□□□ -1.06
SCAF4-205ENST00000472318 IMPACTQ9P2X3 320 aa8.41□□□□□ -1.06
SCAF4-205ENST00000472318 ZNF214Q9UL59 606 aaPredicted RBP8.41□□□□□ -1.06
SCAF4-205ENST00000472318 PRKAB1Q9Y478 270 aa8.41□□□□□ -1.06
SCAF4-205ENST00000472318 MUC6Q6W4X9 2439 aa8.41□□□□□ -1.06
SCAF4-205ENST00000472318 OTOFQ9HC10 1997 aa8.41□□□□□ -1.06
SCAF4-205ENST00000472318 F8W031 263 aaPredicted RBP8.4□□□□□ -1.06
SCAF4-205ENST00000472318 CYP2C8P10632 490 aa8.4□□□□□ -1.06
SCAF4-205ENST00000472318 COL6A1P12109 1028 aa8.4□□□□□ -1.06
SCAF4-205ENST00000472318 PI3P19957 117 aa8.4□□□□□ -1.06
SCAF4-205ENST00000472318 CD247P20963 164 aa8.4□□□□□ -1.06
SCAF4-205ENST00000472318 MRE11P49959 708 aa8.4□□□□□ -1.06
SCAF4-205ENST00000472318 CYP4F8P98187 520 aa8.4□□□□□ -1.06
SCAF4-205ENST00000472318 PPIL2Q13356 520 aa8.4□□□□□ -1.06
SCAF4-205ENST00000472318 TCERG1LQ5VWI1 586 aa8.4□□□□□ -1.06
SCAF4-205ENST00000472318 ERO1BQ86YB8 467 aa8.4□□□□□ -1.06
SCAF4-205ENST00000472318 MCF2L2Q86YR7 1114 aa8.4□□□□□ -1.06
SCAF4-205ENST00000472318 NUP43Q8NFH3 380 aa8.4□□□□□ -1.06
SCAF4-205ENST00000472318 PNISRQ8TF01 805 aaKnown RBP8.4□□□□□ -1.06
SCAF4-205ENST00000472318 ZKSCAN4Q969J2 545 aaPredicted RBP8.4□□□□□ -1.06
SCAF4-205ENST00000472318 P2RX7Q99572 595 aaKnown RBP8.4□□□□□ -1.06
SCAF4-205ENST00000472318 OGDHLQ9ULD0 1010 aa8.4□□□□□ -1.06
SCAF4-205ENST00000472318 IRAK3Q9Y616 596 aa8.4□□□□□ -1.06
SCAF4-205ENST00000472318 USP34Q70CQ2 3546 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 NCOR1O75376 2440 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 MYO1BO43795 1136 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 PPFIA4O75335 1185 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 GSTM1P09488 218 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 SOX9P48436 509 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 CCT4P50991 539 aaKnown RBP8.39□□□□□ -1.07
SCAF4-205ENST00000472318 CDR1P51861 262 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 SMAD3P84022 425 aaKnown RBP8.39□□□□□ -1.07
SCAF4-205ENST00000472318 TMEM62Q0P6H9 643 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 PAK2Q13177 524 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 LONRF3Q496Y0 759 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 NOL9Q5SY16 702 aaKnown RBP8.39□□□□□ -1.07
SCAF4-205ENST00000472318 CYP2R1Q6VVX0 501 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 CKAP2LQ8IYA6 745 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 FIBCD1Q8N539 461 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 NAT16Q8N8M0 369 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.39□□□□□ -1.07
SCAF4-205ENST00000472318 PPM1EQ8WY54 764 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 SGSM3Q96HU1 749 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 TMEM39BQ9GZU3 492 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 SLKQ9H2G2 1235 aaPredicted RBP8.39□□□□□ -1.07
SCAF4-205ENST00000472318 GINM1Q9NU53 330 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 THEGQ9P2T0 379 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 ZNF451Q9Y4E5 1061 aa8.39□□□□□ -1.07
SCAF4-205ENST00000472318 WDFY4Q6ZS81 3184 aa8.38□□□□□ -1.07
SCAF4-205ENST00000472318 FGF10O15520 208 aaPredicted RBP8.38□□□□□ -1.07
SCAF4-205ENST00000472318 CBFA2T2O43439 604 aa8.38□□□□□ -1.07
SCAF4-205ENST00000472318 PRC1O43663 620 aa8.38□□□□□ -1.07
SCAF4-205ENST00000472318 TP53P04637 393 aaPredicted RBP8.38□□□□□ -1.07
SCAF4-205ENST00000472318 TBX4P57082 545 aa8.38□□□□□ -1.07
SCAF4-205ENST00000472318 RHBDL3P58872 404 aa8.38□□□□□ -1.07
SCAF4-205ENST00000472318 MRPS5P82675 430 aaKnown RBP8.38□□□□□ -1.07
SCAF4-205ENST00000472318 CBX2Q14781 532 aaPredicted RBP8.38□□□□□ -1.07
SCAF4-205ENST00000472318 ZFYVE27Q5T4F4 411 aa8.38□□□□□ -1.07
SCAF4-205ENST00000472318 CCDC81Q6ZN84 652 aa8.38□□□□□ -1.07
SCAF4-205ENST00000472318 TMC6Q7Z403 805 aa8.38□□□□□ -1.07
SCAF4-205ENST00000472318 ANKRD18AQ8IVF6 992 aa8.38□□□□□ -1.07
SCAF4-205ENST00000472318 TMEM151BQ8IW70 566 aa8.38□□□□□ -1.07
SCAF4-205ENST00000472318 RASGRP4Q8TDF6 673 aa8.38□□□□□ -1.07
SCAF4-205ENST00000472318 BRF1Q92994 677 aa8.38□□□□□ -1.07
SCAF4-205ENST00000472318 EVI5LQ96CN4 794 aa8.38□□□□□ -1.07
SCAF4-205ENST00000472318 LBHD1Q9BQE6 289 aaPredicted RBP8.38□□□□□ -1.07
SCAF4-205ENST00000472318 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.38□□□□□ -1.072e-15■■■□□ 17.6
SCAF4-205ENST00000472318 ZNF70Q9UC06 446 aaPredicted RBP8.38□□□□□ -1.07
SCAF4-205ENST00000472318 REV3LO60673 3130 aa8.37□□□□□ -1.07
SCAF4-205ENST00000472318 TNPO2O14787 897 aaKnown RBP8.37□□□□□ -1.07
SCAF4-205ENST00000472318 ITGA4P13612 1032 aa8.37□□□□□ -1.07
SCAF4-205ENST00000472318 RAB3GAP1Q15042 981 aa8.37□□□□□ -1.07
SCAF4-205ENST00000472318 TMEM31Q5JXX7 168 aa8.37□□□□□ -1.07
SCAF4-205ENST00000472318 CC2D1BQ5T0F9 858 aaKnown RBP8.37□□□□□ -1.07
SCAF4-205ENST00000472318 HLA-DQA1Q5Y7H0 255 aa8.37□□□□□ -1.07
SCAF4-205ENST00000472318 RPTNQ6XPR3 784 aa8.37□□□□□ -1.07
SCAF4-205ENST00000472318 NME8Q8N427 588 aa8.37□□□□□ -1.07
SCAF4-205ENST00000472318 GPATCH11Q8N954 259 aa8.37□□□□□ -1.07
SCAF4-205ENST00000472318 ZBTB38Q8NAP3 1195 aaPredicted RBP8.37□□□□□ -1.07
SCAF4-205ENST00000472318 MZB1Q8WU39 189 aa8.37□□□□□ -1.07
SCAF4-205ENST00000472318 STAG1Q8WVM7 1258 aa8.37□□□□□ -1.07
SCAF4-205ENST00000472318 MKL1Q969V6 931 aa8.37□□□□□ -1.07
SCAF4-205ENST00000472318 DACT3Q96B18 629 aaPredicted RBP8.37□□□□□ -1.07
SCAF4-205ENST00000472318 RPS6KC1Q96S38 1066 aa8.37□□□□□ -1.07
SCAF4-205ENST00000472318 WRNIP1Q96S55 665 aa8.37□□□□□ -1.07
SCAF4-205ENST00000472318 PCGF6Q9BYE7 350 aa8.37□□□□□ -1.07
SCAF4-205ENST00000472318 EPB41L4AQ9HCS5 686 aaPredicted RBP8.37□□□□□ -1.07
SCAF4-205ENST00000472318 FAM86C1Q9NVL1 165 aa8.37□□□□□ -1.07
SCAF4-205ENST00000472318 SF3B6Q9Y3B4 125 aaKnown RBP8.37□□□□□ -1.07
SCAF4-205ENST00000472318 CHD9Q3L8U1 2897 aa8.36□□□□□ -1.07
SCAF4-205ENST00000472318 ZFHX4Q86UP3 3567 aa8.36□□□□□ -1.07
SCAF4-205ENST00000472318 NUDT19A8MXV4 375 aa8.36□□□□□ -1.07
SCAF4-205ENST00000472318 TCP10L2B9ZVM9 353 aa8.36□□□□□ -1.07
SCAF4-205ENST00000472318 FGRP09769 529 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms