RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 CD40P25942 277 aa5.08□□□□□ -1.6
PRPF40A-207ENST00000471701 SPIDRQ14159 915 aa5.08□□□□□ -1.6
PRPF40A-207ENST00000471701 RABL3Q5HYI8 236 aa5.08□□□□□ -1.6
PRPF40A-207ENST00000471701 LDLRAD3Q86YD5 345 aa5.08□□□□□ -1.6
PRPF40A-207ENST00000471701 SYNE4Q8N205 404 aa5.08□□□□□ -1.6
PRPF40A-207ENST00000471701 MB21D1Q8N884 522 aa5.08□□□□□ -1.6
PRPF40A-207ENST00000471701 RTF1Q92541 710 aaKnown RBP5.08□□□□□ -1.6
PRPF40A-207ENST00000471701 ZG16BQ96DA0 208 aa5.08□□□□□ -1.6
PRPF40A-207ENST00000471701 PGBD4Q96DM1 585 aa5.08□□□□□ -1.6
PRPF40A-207ENST00000471701 TTPALQ9BTX7 342 aa5.08□□□□□ -1.6
PRPF40A-207ENST00000471701 PITHD1Q9GZP4 211 aaPredicted RBP5.08□□□□□ -1.6
PRPF40A-207ENST00000471701 POFUT1Q9H488 388 aa5.08□□□□□ -1.6
PRPF40A-207ENST00000471701 MYPNQ86TC9 1320 aa5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 OPHN1O60890 802 aa5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 SLC25A3Q00325 362 aa5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 TOB2Q14106 344 aaPredicted RBP5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 SART3Q15020 963 aaKnown RBP5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 TCEA2Q15560 299 aa5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 LAIR1Q6GTX8 287 aa5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 UNQ6494/PRO21346Q6UXR6 183 aa5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 ZNF627Q7L945 461 aa5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 DNAJC10Q8IXB1 793 aa5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 MDGA1Q8NFP4 955 aa5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 SLC25A43Q8WUT9 341 aaPredicted RBP5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 ST8SIA2Q92186 375 aa5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 FAM193BQ96PV7 902 aaPredicted RBP5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 HAPLN2Q9GZV7 340 aa5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 KANSL2Q9H9L4 492 aa5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 TMEM260Q9NX78 707 aa5.07□□□□□ -1.6
PRPF40A-207ENST00000471701 NRP1O14786 923 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 MTSS1O43312 755 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 PPFIA4O75335 1185 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 RECQL4O94761 1208 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 PCDH8O95206 1070 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 ATP2A2P16615 1042 aaKnown RBP5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 XPAP23025 273 aaPredicted RBP5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 RABGGTBP53611 331 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 LRRC32Q14392 662 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 ESRP1Q6NXG1 681 aaKnown RBP5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 ESPNLQ6ZVH7 1005 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 APBB1IPQ7Z5R6 666 aaPredicted RBP5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 NXPE1Q8N323 547 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 ZNF276Q8N554 614 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 OR5M3Q8NGP4 307 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 ORAI3Q9BRQ5 295 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 KRTAP17-1Q9BYP8 105 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 ING3Q9NXR8 418 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 GPRC5BQ9NZH0 403 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 KCNG1Q9UIX4 513 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 DMRT1Q9Y5R6 373 aa5.06□□□□□ -1.6
PRPF40A-207ENST00000471701 ST20-MTHFSA0A0A6YYL1 179 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 KLRG2A4D1S0 409 aaPredicted RBP5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 FOXN1O15353 648 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 HOXA3O43365 443 aaPredicted RBP5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 KPNA6O60684 536 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 F2P00734 622 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 GAAP10253 952 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 SCNN1BP51168 640 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 KPNA1P52294 538 aaPredicted RBP5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 FSTL1Q12841 308 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 C21orf62-AS1Q17RA5 79 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 CCDC144BQ3MJ40 725 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 CNNM4Q6P4Q7 775 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 HOMER1Q86YM7 354 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 EFHBQ8N7U6 833 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 FERMT2Q96AC1 680 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 DRC1Q96MC2 740 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 CPPED1Q9BRF8 314 aaPredicted RBP5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 THG1LQ9NWX6 298 aaKnown RBP5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 H2AFY2Q9P0M6 372 aaPredicted RBP5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 USP36Q9P275 1121 aaKnown RBP5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 USP18Q9UMW8 372 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 HDAC5Q9UQL6 1122 aa5.05□□□□□ -1.6
PRPF40A-207ENST00000471701 A0A0A6YYK5 440 aaPredicted RBP5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 ALDH1A2O94788 518 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 HK1P19367 917 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 CD69Q07108 199 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 PTPAQ15257 358 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 LY6G5CQ5SRR4 150 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 KRTAP5-3Q6L8H2 238 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 MRGPREQ86SM8 312 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 FAM83AQ86UY5 434 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 AHI1Q8N157 1196 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 CDYL2Q8N8U2 506 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 CHTF18Q8WVB6 975 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 SOX7Q9BT81 388 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 ZMAT4Q9H898 229 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 TRPS1Q9UHF7 1281 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 MSRAQ9UJ68 235 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 SORCS3Q9UPU3 1222 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 PCDHB6Q9Y5E3 794 aa5.04□□□□□ -1.6
PRPF40A-207ENST00000471701 ELL2O00472 640 aaPredicted RBP5.03□□□□□ -1.6
PRPF40A-207ENST00000471701 NRP2O60462 931 aa5.03□□□□□ -1.6
PRPF40A-207ENST00000471701 RHOBTB3O94955 611 aa5.03□□□□□ -1.6
PRPF40A-207ENST00000471701 LSP1P33241 339 aa5.03□□□□□ -1.6
PRPF40A-207ENST00000471701 NANOS3P60323 173 aaKnown RBP5.03□□□□□ -1.6
PRPF40A-207ENST00000471701 OCRLQ01968 901 aa5.03□□□□□ -1.6
PRPF40A-207ENST00000471701 DCAF17Q5H9S7 520 aaPredicted RBP5.03□□□□□ -1.6
PRPF40A-207ENST00000471701 CREB3L3Q68CJ9 461 aa5.03□□□□□ -1.6
PRPF40A-207ENST00000471701 NAIF1Q69YI7 327 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms