RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 DDAH1O94760 285 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 ATG7O95352 703 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 DARSP14868 501 aaKnown RBP7.77□□□□□ -1.17
HDAC1-204ENST00000471488 PHKA2P46019 1235 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 GPC3P51654 580 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 GPC5P78333 572 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 PTH1RQ03431 593 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 SPEM2Q0P670 501 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 JAKMIP3Q5VZ66 844 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 PHLDB3Q6NSJ2 640 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 CATSPER4Q7RTX7 472 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 MICU3Q86XE3 530 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 TICAM2Q86XR7 235 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 GPR161Q8N6U8 529 aaKnown RBP7.77□□□□□ -1.17
HDAC1-204ENST00000471488 B3GALT6Q96L58 329 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 NLRP4Q96MN2 994 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 SH2D3AQ9BRG2 576 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 RTKNQ9BST9 563 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 VN1R3Q9BXE9 311 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 LRRC2Q9BYS8 371 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 GCOM2Q9BZD3 368 aaPredicted RBP7.77□□□□□ -1.17
HDAC1-204ENST00000471488 IL25Q9H293 177 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 ADAMTS10Q9H324 1103 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 LY9Q9HBG7 655 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 WDR6Q9NNW5 1121 aaKnown RBP7.77□□□□□ -1.17
HDAC1-204ENST00000471488 NRBP2Q9NSY0 501 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 DPP7Q9UHL4 492 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 MTF2Q9Y483 593 aaPredicted RBP7.77□□□□□ -1.17
HDAC1-204ENST00000471488 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.77□□□□□ -1.17
HDAC1-204ENST00000471488 DENND4AQ7Z401 1863 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 A0A087WZ62 844 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 KANSL1LA0AUZ9 987 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 SMCO2A6NFE2 343 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 SPTLC1O15269 473 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 TEX28O15482 410 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 GAS2O43903 313 aaKnown RBP7.76□□□□□ -1.17
HDAC1-204ENST00000471488 DDHD2O94830 711 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 ALDH2P05091 517 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 ADRB1P08588 477 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 SKIP12755 728 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 LAMP2P13473 410 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 SFPQP23246 707 aaKnown RBP eCLIP7.76□□□□□ -1.17
HDAC1-204ENST00000471488 FSHRP23945 695 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 ANTXR2P58335 489 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 PRKCEQ02156 737 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 MLF2Q15773 248 aaPredicted RBP7.76□□□□□ -1.17
HDAC1-204ENST00000471488 MTERF2Q49AM1 385 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 WWC2Q6AWC2 1192 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 SYNE3Q6ZMZ3 975 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 TAS1R1Q7RTX1 841 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 ZNF598Q86UK7 904 aaKnown RBP7.76□□□□□ -1.17
HDAC1-204ENST00000471488 CHD1LQ86WJ1 897 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 RHPN2Q8IUC4 686 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 PLEKHM2Q8IWE5 1019 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 MAML2Q8IZL2 1156 aaPredicted RBP7.76□□□□□ -1.17
HDAC1-204ENST00000471488 IGDCC4Q8TDY8 1250 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 PGBD4Q96DM1 585 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 FAM167AQ96KS9 214 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 KXD1Q9BQD3 176 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 FDXACB1Q9BRP7 624 aaPredicted RBP7.76□□□□□ -1.17
HDAC1-204ENST00000471488 RPP25Q9BUL9 199 aaKnown RBP7.76□□□□□ -1.17
HDAC1-204ENST00000471488 APOL6Q9BWW8 343 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 FAM105AQ9NUU6 356 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 ZSCAN32Q9NX65 697 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 DLGAP2Q9P1A6 1054 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 EPS15L1Q9UBC2 864 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 SEPT9Q9UHD8 586 aaPredicted RBP7.76□□□□□ -1.17
HDAC1-204ENST00000471488 PCDHGA2Q9Y5H1 932 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 PCDHA10Q9Y5I2 948 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 IRAK3Q9Y616 596 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 SLC12A7Q9Y666 1083 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 COL4A3Q01955 1670 aa7.76□□□□□ -1.17
HDAC1-204ENST00000471488 IGKV6D-21A0A0A0MT36 114 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 FAM86B1E9PN63 330 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 MEIS1O00470 390 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 NRP1O14786 923 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 B4GALT3O60512 393 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 OFD1O75665 1012 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 FOSP01100 380 aaPredicted RBP7.75□□□□□ -1.17
HDAC1-204ENST00000471488 OATP04181 439 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 FAM86B2P0C5J1 330 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 RPL17P18621 184 aaKnown RBP7.75□□□□□ -1.17
HDAC1-204ENST00000471488 GLUD2P49448 558 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 DNM2P50570 870 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 NTHL1P78549 312 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 DRP2Q13474 957 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 HTR4Q13639 388 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 SLC44A4Q53GD3 710 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 PRR16Q569H4 304 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 ZBTB41Q5SVQ8 909 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 PARM1Q6UWI2 310 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 FAM43BQ6ZT52 329 aaPredicted RBP7.75□□□□□ -1.17
HDAC1-204ENST00000471488 TPRG1Q6ZUI0 275 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 GRASPQ7Z6J2 395 aaPredicted RBP7.75□□□□□ -1.17
HDAC1-204ENST00000471488 RUFY2Q8WXA3 655 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 FGF14Q92915 247 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 NXPE3Q969Y0 559 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 RPS6KC1Q96S38 1066 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 RSAD1Q9HA92 442 aa7.75□□□□□ -1.17
HDAC1-204ENST00000471488 PARD6AQ9NPB6 346 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms