RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 KCNT2Q6UVM3 1135 aa10.31□□□□□ -0.76
CPSF4-211ENST00000471455 LIAT1Q6ZQX7 453 aa10.31□□□□□ -0.76
CPSF4-211ENST00000471455 DHX32Q7L7V1 743 aaKnown RBP10.31□□□□□ -0.76
CPSF4-211ENST00000471455 TMC7Q7Z402 723 aa10.31□□□□□ -0.76
CPSF4-211ENST00000471455 REXO1Q8N1G1 1221 aaKnown RBP10.31□□□□□ -0.76
CPSF4-211ENST00000471455 VN1R2Q8NFZ6 395 aa10.31□□□□□ -0.76
CPSF4-211ENST00000471455 BICD2Q8TD16 824 aa10.31□□□□□ -0.76
CPSF4-211ENST00000471455 RIPOR3Q96MK2 946 aa10.31□□□□□ -0.76
CPSF4-211ENST00000471455 PPP1R16BQ96T49 567 aa10.31□□□□□ -0.76
CPSF4-211ENST00000471455 CWH43Q9H720 699 aa10.31□□□□□ -0.76
CPSF4-211ENST00000471455 NRBP2Q9NSY0 501 aa10.31□□□□□ -0.76
CPSF4-211ENST00000471455 DZANK1Q9NVP4 752 aa10.31□□□□□ -0.76
CPSF4-211ENST00000471455 MAFBQ9Y5Q3 323 aaPredicted RBP10.31□□□□□ -0.76
CPSF4-211ENST00000471455 MYH9P35579 1960 aaKnown RBP10.31□□□□□ -0.76
CPSF4-211ENST00000471455 KMT2EQ8IZD2 1858 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 IGLV3-22A0A075B6J6 115 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 KLF18A0A0U1RQI7 1052 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 ZBTB42B2RXF5 422 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 FAM86B1E9PN63 330 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 GFRA3O60609 400 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 GPR32O75388 356 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 EOMESO95936 686 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 VTNP04004 478 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 FAM86B2P0C5J1 330 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 EIF4BP23588 611 aaKnown RBP10.3□□□□□ -0.76
CPSF4-211ENST00000471455 AVPR2P30518 371 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 CA8P35219 290 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 MTHFRP42898 656 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 NLRP11P59045 1033 aaKnown RBP10.3□□□□□ -0.76
CPSF4-211ENST00000471455 AKAP17AQ02040 695 aaKnown RBP10.3□□□□□ -0.76
CPSF4-211ENST00000471455 TCF15Q12870 199 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 GIT2Q14161 759 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 DSC3Q14574 896 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 PFKFB3Q16875 520 aaPredicted RBP10.3□□□□□ -0.76
CPSF4-211ENST00000471455 JAKMIP3Q5VZ66 844 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 LLGL2Q6P1M3 1020 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 RNF169Q8NCN4 708 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 CCDC148Q8NFR7 591 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 ATOH1Q92858 354 aaPredicted RBP10.3□□□□□ -0.76
CPSF4-211ENST00000471455 ASIC4Q96FT7 647 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 TMEM169Q96HH4 297 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 S1PR5Q9H228 398 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 GABBR1Q9UBS5 961 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 STK39Q9UEW8 545 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 NAP1L2Q9ULW6 460 aaPredicted RBP10.3□□□□□ -0.76
CPSF4-211ENST00000471455 SORCS3Q9UPU3 1222 aa10.3□□□□□ -0.76
CPSF4-211ENST00000471455 EVPLQ92817 2033 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 DHX15O43143 795 aaKnown RBP10.29□□□□□ -0.76
CPSF4-211ENST00000471455 SKIP12755 728 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 SFNP31947 248 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 ALDH7A1P49419 539 aaKnown RBP10.29□□□□□ -0.76
CPSF4-211ENST00000471455 METAP2P50579 478 aaKnown RBP eCLIP10.29□□□□□ -0.76
CPSF4-211ENST00000471455 MMP16P51512 607 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 CLCN3P51790 818 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 JAK3P52333 1124 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 RBM10P98175 930 aaKnown RBP10.29□□□□□ -0.76
CPSF4-211ENST00000471455 APOBRQ0VD83 1088 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 KCNC3Q14003 757 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 PRR16Q569H4 304 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 EFCAB12Q6NXP0 572 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 SYCE2Q6PIF2 218 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 ECHDC2Q86YB7 292 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 TDRD5Q8NAT2 981 aaKnown RBP10.29□□□□□ -0.76
CPSF4-211ENST00000471455 KREMEN2Q8NCW0 462 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 CASD1Q96PB1 797 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 ZMYND12Q9H0C1 365 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 ADAM7Q9H2U9 754 aa10.29□□□□□ -0.76
CPSF4-211ENST00000471455 A0A0U1RQF3 1178 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 HIDE1A8MVS5 230 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 DXOO77932 396 aaKnown RBP10.28□□□□□ -0.76
CPSF4-211ENST00000471455 DARSP14868 501 aaKnown RBP10.28□□□□□ -0.76
CPSF4-211ENST00000471455 ATP4AP20648 1035 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 SFPQP23246 707 aaKnown RBP eCLIP10.28□□□□□ -0.76
CPSF4-211ENST00000471455 DNM2P50570 870 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 POLGP54098 1239 aaPredicted RBP10.28□□□□□ -0.76
CPSF4-211ENST00000471455 VCPP55072 806 aaKnown RBP10.28□□□□□ -0.76
CPSF4-211ENST00000471455 EXOSC10Q01780 885 aaKnown RBP10.28□□□□□ -0.76
CPSF4-211ENST00000471455 PRKCEQ02156 737 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 TBC1D8BQ0IIM8 1120 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 TRMT1LQ7Z2T5 733 aaKnown RBP10.28□□□□□ -0.76
CPSF4-211ENST00000471455 PPFIBP1Q86W92 1011 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 SLC39A11Q8N1S5 342 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 MRPL43Q8N983 215 aaKnown RBP10.28□□□□□ -0.76
CPSF4-211ENST00000471455 CRYGNQ8WXF5 182 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 SNX27Q96L92 541 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 RIT2Q99578 217 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 APOL5Q9BWW9 433 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 GCOM2Q9BZD3 368 aaPredicted RBP10.28□□□□□ -0.76
CPSF4-211ENST00000471455 C22orf23Q9BZE7 217 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 INO80BQ9C086 356 aaPredicted RBP10.28□□□□□ -0.76
CPSF4-211ENST00000471455 ADAMTS10Q9H324 1103 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 CHST12Q9NRB3 414 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 BRPF3Q9ULD4 1205 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 FCF1Q9Y324 198 aaKnown RBP10.28□□□□□ -0.76
CPSF4-211ENST00000471455 HCFC2Q9Y5Z7 792 aa10.28□□□□□ -0.76
CPSF4-211ENST00000471455 PTPRZ1P23471 2315 aaPredicted RBP10.28□□□□□ -0.76
CPSF4-211ENST00000471455 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-211ENST00000471455 C2orf71A6NGG8 1288 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 GAS7O60861 476 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 SP100P23497 879 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms