RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 TGS1Q96RS0 853 aaKnown RBP16.81■□□□□ 0.28
ABCF3-208ENST00000471226 RUSC1Q9BVN2 902 aa16.81■□□□□ 0.28
ABCF3-208ENST00000471226 BLOC1S4Q9NUP1 217 aa16.81■□□□□ 0.28
ABCF3-208ENST00000471226 LRFN2Q9ULH4 789 aa16.81■□□□□ 0.28
ABCF3-208ENST00000471226 PIN4Q9Y237 131 aaKnown RBP16.81■□□□□ 0.28
ABCF3-208ENST00000471226 STXBP5LQ9Y2K9 1186 aa16.81■□□□□ 0.28
ABCF3-208ENST00000471226 SPTLC2O15270 562 aa16.8■□□□□ 0.28
ABCF3-208ENST00000471226 YEATS4O95619 227 aa16.8■□□□□ 0.28
ABCF3-208ENST00000471226 EOMESO95936 686 aa16.8■□□□□ 0.28
ABCF3-208ENST00000471226 LINC00271P0C7V0 271 aa16.8■□□□□ 0.28
ABCF3-208ENST00000471226 PLA2G4BP0C869 781 aa16.8■□□□□ 0.28
ABCF3-208ENST00000471226 GUCY2CP25092 1073 aa16.8■□□□□ 0.28
ABCF3-208ENST00000471226 NAMPTP43490 491 aa16.8■□□□□ 0.28
ABCF3-208ENST00000471226 AMHR2Q16671 573 aa16.8■□□□□ 0.28
ABCF3-208ENST00000471226 CDCA2Q69YH5 1023 aaPredicted RBP16.8■□□□□ 0.28
ABCF3-208ENST00000471226 ZNF598Q86UK7 904 aaKnown RBP16.8■□□□□ 0.28
ABCF3-208ENST00000471226 CMTR2Q8IYT2 770 aaKnown RBP16.8■□□□□ 0.28
ABCF3-208ENST00000471226 DAW1Q8N136 415 aa16.8■□□□□ 0.28
ABCF3-208ENST00000471226 KRI1Q8N9T8 703 aaKnown RBP16.8■□□□□ 0.28
ABCF3-208ENST00000471226 SYMPKQ92797 1274 aaKnown RBP16.8■□□□□ 0.28
ABCF3-208ENST00000471226 SAMD11Q96NU1 681 aa16.8■□□□□ 0.28
ABCF3-208ENST00000471226 TIPINQ9BVW5 301 aa16.8■□□□□ 0.28
ABCF3-208ENST00000471226 CERS4Q9HA82 394 aa16.8■□□□□ 0.28
ABCF3-208ENST00000471226 POLD4Q9HCU8 107 aa16.8■□□□□ 0.28
ABCF3-208ENST00000471226 EPOPA6NHQ4 379 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 LRRIQ4A6NIV6 560 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 INO80B-WBP1J3KQ70 363 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 TSPAN1O60635 241 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 ZNF623O75123 536 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 ATF7P17544 494 aaPredicted RBP16.79■□□□□ 0.28
ABCF3-208ENST00000471226 PLCG1P19174 1290 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 AXLP30530 894 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 GATMP50440 423 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 MAPK7Q13164 816 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 BTG3Q14201 252 aaPredicted RBP16.79■□□□□ 0.28
ABCF3-208ENST00000471226 PPP2R5AQ15172 486 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 TWF2Q6IBS0 349 aaKnown RBP16.79■□□□□ 0.28
ABCF3-208ENST00000471226 FIBCD1Q8N539 461 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 ARNTL2Q8WYA1 636 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 C17orf80Q9BSJ5 609 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 C2orf40Q9H1Z8 148 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 RNF19AQ9NV58 838 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 KCND2Q9NZV8 630 aa16.79■□□□□ 0.28
ABCF3-208ENST00000471226 PRRC2BQ5JSZ5 2229 aaKnown RBP16.78■□□□□ 0.28
ABCF3-208ENST00000471226 RFXAPO00287 272 aa16.78■□□□□ 0.28
ABCF3-208ENST00000471226 HIP1RO75146 1068 aa16.78■□□□□ 0.28
ABCF3-208ENST00000471226 ERLIN2O94905 339 aa16.78■□□□□ 0.28
ABCF3-208ENST00000471226 SKIP12755 728 aa16.78■□□□□ 0.28
ABCF3-208ENST00000471226 IBSPP21815 317 aaPredicted RBP16.78■□□□□ 0.28
ABCF3-208ENST00000471226 ADGRE1Q14246 886 aa16.78■□□□□ 0.28
ABCF3-208ENST00000471226 FAM187BQ17R55 369 aa16.78■□□□□ 0.28
ABCF3-208ENST00000471226 FOXD4L6Q3SYB3 417 aaPredicted RBP16.78■□□□□ 0.28
ABCF3-208ENST00000471226 UBXN11Q5T124 520 aa16.78■□□□□ 0.28
ABCF3-208ENST00000471226 FOXD4L3Q6VB84 417 aaPredicted RBP16.78■□□□□ 0.28
ABCF3-208ENST00000471226 PPP4R3CPQ6ZMV5 832 aa16.78■□□□□ 0.28
ABCF3-208ENST00000471226 RAD54LQ92698 747 aa16.78■□□□□ 0.28
ABCF3-208ENST00000471226 CLP1Q92989 425 aaKnown RBP16.78■□□□□ 0.28
ABCF3-208ENST00000471226 IFT74Q96LB3 600 aa16.78■□□□□ 0.28
ABCF3-208ENST00000471226 GAS2L1Q99501 681 aaPredicted RBP16.78■□□□□ 0.28
ABCF3-208ENST00000471226 FZD8Q9H461 694 aa16.78■□□□□ 0.28
ABCF3-208ENST00000471226 FAM105AQ9NUU6 356 aa16.78■□□□□ 0.28
ABCF3-208ENST00000471226 DAXXQ9UER7 740 aaPredicted RBP16.78■□□□□ 0.28
ABCF3-208ENST00000471226 CCDC39Q9UFE4 941 aa16.78■□□□□ 0.28
ABCF3-208ENST00000471226 HOXA2O43364 376 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 LPXNO60711 386 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 SSBP05455 408 aaKnown RBP eCLIP16.77■□□□□ 0.28
ABCF3-208ENST00000471226 FGFR1P11362 822 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 POU3F3P20264 500 aaPredicted RBP16.77■□□□□ 0.28
ABCF3-208ENST00000471226 DDIT3P35638 169 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 RAB27AP51159 221 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 DNM1Q05193 864 aaKnown RBP16.77■□□□□ 0.28
ABCF3-208ENST00000471226 ARSHQ5FYA8 562 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 MRPL10Q7Z7H8 261 aaKnown RBP16.77■□□□□ 0.28
ABCF3-208ENST00000471226 ZBTB8OSQ8IWT0 167 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 TMEM192Q8IY95 271 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 CCDC51Q96ER9 411 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 PRIMPOLQ96LW4 560 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 DRC1Q96MC2 740 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 CCDC113Q9H0I3 377 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 C17orf75Q9HAS0 396 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 PRMT7Q9NVM4 692 aaPredicted RBP16.77■□□□□ 0.28
ABCF3-208ENST00000471226 RCOR1Q9UKL0 485 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 CFAP45Q9UL16 551 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 MTUS1Q9ULD2 1270 aa16.77■□□□□ 0.28
ABCF3-208ENST00000471226 ATG2AQ2TAZ0 1938 aa16.76■□□□□ 0.27
ABCF3-208ENST00000471226 COL6A3P12111 3177 aa16.76■□□□□ 0.27
ABCF3-208ENST00000471226 TBKBP1A7MCY6 615 aa16.76■□□□□ 0.27
ABCF3-208ENST00000471226 C5orf67F2Z3F1 127 aa16.76■□□□□ 0.27
ABCF3-208ENST00000471226 B4GALT5O43286 388 aa16.76■□□□□ 0.27
ABCF3-208ENST00000471226 CUTAO60888 179 aa16.76■□□□□ 0.27
ABCF3-208ENST00000471226 FOSL2P15408 326 aa16.76■□□□□ 0.27
ABCF3-208ENST00000471226 ARF4P18085 180 aaPredicted RBP16.76■□□□□ 0.27
ABCF3-208ENST00000471226 TXLNAP40222 546 aa16.76■□□□□ 0.27
ABCF3-208ENST00000471226 NPTX2P47972 431 aa16.76■□□□□ 0.27
ABCF3-208ENST00000471226 NCBP1Q09161 790 aaKnown RBP16.76■□□□□ 0.27
ABCF3-208ENST00000471226 MCM6Q14566 821 aa16.76■□□□□ 0.27
ABCF3-208ENST00000471226 PAN2Q504Q3 1202 aaKnown RBP16.76■□□□□ 0.27
ABCF3-208ENST00000471226 EPC2Q52LR7 807 aa16.76■□□□□ 0.27
ABCF3-208ENST00000471226 NAALADL2Q58DX5 795 aa16.76■□□□□ 0.27
ABCF3-208ENST00000471226 AXDND1Q5T1B0 1012 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms