RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 C16orf86Q6ZW13 317 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 STRIP2Q9ULQ0 834 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 KCPQ6ZWJ8 1503 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 ZNF335Q9H4Z2 1342 aaPredicted RBP11.26□□□□□ -0.61
RRP1B-202ENST00000470886 RGPD2P0DJD1 1756 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 A6NJR5 290 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 GIPC1O14908 333 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 PLS3P13797 630 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 AARSP49588 968 aaKnown RBP eCLIP11.26□□□□□ -0.61
RRP1B-202ENST00000470886 KRT76Q01546 638 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 TTBK2Q6IQ55 1244 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 CAPN12Q6ZSI9 719 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 RHOT1Q8IXI2 618 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 GDAP1Q8TB36 358 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 XPO6Q96QU8 1125 aaKnown RBP11.26□□□□□ -0.61
RRP1B-202ENST00000470886 MOV10L1Q9BXT6 1211 aaKnown RBP11.26□□□□□ -0.61
RRP1B-202ENST00000470886 MTMR4Q9NYA4 1195 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 ADAM22Q9P0K1 906 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 SEPT9Q9UHD8 586 aaPredicted RBP11.26□□□□□ -0.61
RRP1B-202ENST00000470886 USP17L10C9JJH3 530 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 CES2O00748 559 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 CRCPO75575 148 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 CPP00450 1065 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 TAP1Q03518 808 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 ZNF543Q08ER8 600 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 GLYCTKQ8IVS8 523 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 SYT2Q8N9I0 419 aaPredicted RBP11.26□□□□□ -0.61
RRP1B-202ENST00000470886 LRRC37BQ96QE4 947 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 NUP85Q9BW27 656 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 TRIM6Q9C030 488 aaPredicted RBP11.26□□□□□ -0.61
RRP1B-202ENST00000470886 CARD9Q9H257 536 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 TBK1Q9UHD2 729 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 PPP1R9AQ9ULJ8 1098 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 SMG5Q9UPR3 1016 aaKnown RBP11.26□□□□□ -0.61
RRP1B-202ENST00000470886 SPATA31A1Q5TZJ5 1347 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 POTEFA5A3E0 1075 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 TRIM66O15016 1216 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 PEX19P40855 299 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 TFDP2Q14188 446 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 POTEGQ6S5H5 508 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 POTEEQ6S8J3 1075 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 FAM196AQ6ZSG2 479 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 TMEM35BQ8NCS4 154 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 SLC44A5Q8NCS7 719 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 SGSM3Q96HU1 749 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 SAYSD1Q9NPB0 183 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 ZNF277Q9NRM2 450 aaPredicted RBP11.26□□□□□ -0.61
RRP1B-202ENST00000470886 IRAK4Q9NWZ3 460 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 DDX56Q9NY93 547 aaKnown RBP11.26□□□□□ -0.61
RRP1B-202ENST00000470886 APEX2Q9UBZ4 518 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 C5P01031 1676 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 ADAMTS7Q9UKP4 1686 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 MAP2K7O14733 419 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 SESN3P58005 492 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 PPP4CP60510 307 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 SCYL2Q6P3W7 929 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 ZNF662Q6ZS27 426 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 PODNQ7Z5L7 613 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 RIBC1Q8N443 379 aaPredicted RBP11.25□□□□□ -0.61
RRP1B-202ENST00000470886 EIF1ADQ8N9N8 165 aaKnown RBP11.25□□□□□ -0.61
RRP1B-202ENST00000470886 TCP10L2B9ZVM9 353 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 USP17L15C9J2P7 530 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 USP17L13C9JLJ4 530 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 USP17L11C9JVI0 530 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 USP17L18D6R9N7 530 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 USP17L22D6RA61 530 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 USP17L17D6RBQ6 530 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 USP17L19D6RCP7 530 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 USP17L20D6RJB6 530 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 ZNF189O75820 626 aaPredicted RBP11.25□□□□□ -0.61
RRP1B-202ENST00000470886 POLD1P28340 1107 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 ARL1P40616 181 aaPredicted RBP11.25□□□□□ -0.61
RRP1B-202ENST00000470886 YARSP54577 528 aaKnown RBP11.25□□□□□ -0.61
RRP1B-202ENST00000470886 USP17L24Q0WX57 530 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 CENPPQ6IPU0 288 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 USP17L6PQ6QN14 398 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 BZW1Q7L1Q6 419 aaKnown RBP11.25□□□□□ -0.61
RRP1B-202ENST00000470886 ATL2Q8NHH9 583 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 RNF34Q969K3 372 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 EIF2AK1Q9BQI3 630 aaKnown RBP11.25□□□□□ -0.61
RRP1B-202ENST00000470886 IP6K2Q9UHH9 426 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 FEM1BQ9UK73 627 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 WDR64B1ANS9 1081 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 RAD51CO43502 376 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 TMOD1P28289 359 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 AP3M2P53677 418 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 GALCP54803 685 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
RRP1B-202ENST00000470886 DEUP1Q05D60 604 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 MOXD1Q6UVY6 613 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 TRIM59Q8IWR1 403 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 HACE1Q8IYU2 909 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 NSMCE1Q8WV22 266 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 SEC16BQ96JE7 1060 aa11.25□□□□□ -0.61
RRP1B-202ENST00000470886 TGS1Q96RS0 853 aaKnown RBP11.25□□□□□ -0.61
RRP1B-202ENST00000470886 RIOK1Q9BRS2 568 aaKnown RBP11.25□□□□□ -0.61
RRP1B-202ENST00000470886 CDH16O75309 829 aa11.24□□□□□ -0.61
RRP1B-202ENST00000470886 FDX1P10109 184 aa11.24□□□□□ -0.61
RRP1B-202ENST00000470886 CARSP49589 748 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms