RNA–Protein interactions for RNA: ENST00000470482.5

HDLBP-232, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-232ENST00000470482 SMRP1Q8NCR6 262 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 IL27Q8NEV9 243 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 SLC7A3Q8WY07 619 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 NFKBIZQ9BYH8 718 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 TLR9Q9NR96 1032 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 SH2B1Q9NRF2 756 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-232ENST00000470482 AAASQ9NRG9 546 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 FAM105AQ9NUU6 356 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 ARID2Q68CP9 1835 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 NEMFO60524 1076 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 GPR37L1O60883 481 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 SFPQP23246 707 aaKnown RBP eCLIP13.09□□□□□ -0.31
HDLBP-232ENST00000470482 PBX3P40426 434 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 TXKP42681 527 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 RBM10P98175 930 aaKnown RBP13.09□□□□□ -0.31
HDLBP-232ENST00000470482 XKR9Q5GH70 373 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 TMEM173Q86WV6 379 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-232ENST00000470482 ADHFE1Q8IWW8 467 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 LRRC43Q8N309 656 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 SMG8Q8ND04 991 aaKnown RBP13.09□□□□□ -0.31
HDLBP-232ENST00000470482 HELQQ8TDG4 1101 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 ASAP3Q8TDY4 903 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 PSPC1Q8WXF1 523 aaKnown RBP13.09□□□□□ -0.31
HDLBP-232ENST00000470482 SUSD6Q92537 303 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 LPPQ93052 612 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 POLR3CQ9BUI4 534 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-232ENST00000470482 VN1R3Q9BXE9 311 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 S1PR5Q9H228 398 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 NRDE2Q9H7Z3 1164 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 BRMS1Q9HCU9 246 aa13.09□□□□□ -0.31
HDLBP-232ENST00000470482 DBR1Q9UK59 544 aaKnown RBP13.09□□□□□ -0.31
HDLBP-232ENST00000470482 A0A087WWV3 80 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 POTEMA6NI47 508 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 HIDE1A8MVS5 230 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 MED24O75448 989 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 CD2BP2O95400 341 aaKnown RBP13.08□□□□□ -0.32
HDLBP-232ENST00000470482 GLRA2P23416 452 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 NRIP1P48552 1158 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 POLGP54098 1239 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-232ENST00000470482 BCAR1P56945 870 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 HMGN5P82970 282 aaKnown RBP13.08□□□□□ -0.32
HDLBP-232ENST00000470482 GUCY1B3Q02153 619 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 SMAD4Q13485 552 aaKnown RBP13.08□□□□□ -0.32
HDLBP-232ENST00000470482 MXD4Q14582 209 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-232ENST00000470482 CBX2Q14781 532 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-232ENST00000470482 PCBP1Q15365 356 aaKnown RBP eCLIP13.08□□□□□ -0.32
HDLBP-232ENST00000470482 ECM1Q16610 540 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 NOSTRINQ8IVI9 506 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 MRPL43Q8N983 215 aaKnown RBP13.08□□□□□ -0.32
HDLBP-232ENST00000470482 RNF149Q8NC42 400 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 BCL7CQ8WUZ0 217 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-232ENST00000470482 TCP11Q8WWU5 503 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 C8orf76Q96K31 380 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 NLRP4Q96MN2 994 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 ZNF558Q96NG5 402 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 CDCA3Q99618 268 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-232ENST00000470482 TUFT1Q9NNX1 390 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 TBC1D13Q9NVG8 400 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 SPG21Q9NZD8 308 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 CD207Q9UJ71 328 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 PCDHB2Q9Y5E7 798 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 IRAK3Q9Y616 596 aa13.08□□□□□ -0.32
HDLBP-232ENST00000470482 PER2O15055 1255 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 TSPAN1O60635 241 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 LILRB3O75022 631 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 DGAT1O75907 488 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 GALTP07902 379 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 SRGAP2CP0DJJ0 459 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 SKIP12755 728 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 NCLP19338 710 aaKnown RBP13.07□□□□□ -0.32
HDLBP-232ENST00000470482 RPA1P27694 616 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 PPM1AP35813 382 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 TRAPPC10P48553 1259 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 RAB27AP51159 221 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 FOSBP53539 338 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 MBTD1Q05BQ5 628 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 CAPSQ13938 189 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 IL17AQ16552 155 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 SYCE2Q6PIF2 218 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 CATSPER4Q7RTX7 472 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 ZNF280BQ86YH2 543 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 THNSL1Q8IYQ7 743 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 GSTCDQ8NEC7 633 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 PIGOQ8TEQ8 1089 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 MTRQ99707 1265 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 LRFN3Q9BTN0 628 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 C1QTNF1Q9BXJ1 281 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 IGFLR1Q9H665 355 aa13.07□□□□□ -0.32
HDLBP-232ENST00000470482 NGRNQ9NPE2 291 aaKnown RBP13.07□□□□□ -0.32
HDLBP-232ENST00000470482 PIN4Q9Y237 131 aaKnown RBP13.07□□□□□ -0.32
HDLBP-232ENST00000470482 C2orf71A6NGG8 1288 aa13.06□□□□□ -0.32
HDLBP-232ENST00000470482 LOC730098B7Z3J9 87 aa13.06□□□□□ -0.32
HDLBP-232ENST00000470482 DDHD2O94830 711 aa13.06□□□□□ -0.32
HDLBP-232ENST00000470482 MUTP22033 750 aa13.06□□□□□ -0.32
HDLBP-232ENST00000470482 AXLP30530 894 aa13.06□□□□□ -0.32
HDLBP-232ENST00000470482 MCM7P33993 719 aa13.06□□□□□ -0.32
HDLBP-232ENST00000470482 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.322e-11■■□□□ 12.6
HDLBP-232ENST00000470482 TRIM29Q14134 588 aa13.06□□□□□ -0.32
HDLBP-232ENST00000470482 ZNF174Q15697 407 aa13.06□□□□□ -0.32
HDLBP-232ENST00000470482 NOMO2Q5JPE7 1267 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms