RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-210ENST00000470396 DNM3Q9UQ16 869 aa7.58□□□□□ -1.2
PSMD4-210ENST00000470396 USP20Q9Y2K6 914 aa7.58□□□□□ -1.2
PSMD4-210ENST00000470396 DENND3A2RUS2 1198 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 RFXAPO00287 272 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 SPTLC2O15270 562 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 ASAP2O43150 1006 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 TSPAN1O60635 241 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 LPXNO60711 386 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 HIP1RO75146 1068 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 DGKIO75912 1065 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 YEATS4O95619 227 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 PLA2G4BP0C869 781 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 FGFR1P11362 822 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 CDC42EP1Q00587 391 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 CACNB1Q02641 598 aaPredicted RBP7.57□□□□□ -1.2
PSMD4-210ENST00000470396 RAD51AP2Q09MP3 1159 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 MCM6Q14566 821 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 MXD4Q14582 209 aaPredicted RBP7.57□□□□□ -1.2
PSMD4-210ENST00000470396 CLLU1OSQ5K130 101 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 PPP2R2DQ66LE6 453 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 SHC4Q6S5L8 630 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 SLC24A5Q71RS6 500 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 TAS1R3Q7RTX0 852 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 SRGAP1Q7Z6B7 1085 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 NPAS4Q8IUM7 802 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 SYT2Q8N9I0 419 aaPredicted RBP7.57□□□□□ -1.2
PSMD4-210ENST00000470396 KRI1Q8N9T8 703 aaKnown RBP7.57□□□□□ -1.2
PSMD4-210ENST00000470396 MCPH1Q8NEM0 835 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 TCP11Q8WWU5 503 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 CCDC43Q96MW1 224 aaKnown RBP7.57□□□□□ -1.2
PSMD4-210ENST00000470396 CDX2Q99626 313 aaPredicted RBP7.57□□□□□ -1.2
PSMD4-210ENST00000470396 C17orf80Q9BSJ5 609 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 TRAIPQ9BWF2 469 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 NFKBIZQ9BYH8 718 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 CCDC113Q9H0I3 377 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 PRDM12Q9H4Q4 367 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 CERS4Q9HA82 394 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 AGPAT5Q9NUQ2 364 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 PIN4Q9Y237 131 aaKnown RBP7.57□□□□□ -1.2
PSMD4-210ENST00000470396 INSL6Q9Y581 213 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 STK24Q9Y6E0 443 aa7.57□□□□□ -1.2
PSMD4-210ENST00000470396 RALGAPA2Q2PPJ7 1873 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 A0A0U1RQF3 1178 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 LRRIQ4A6NIV6 560 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 SFI1A8K8P3 1242 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 SLC26A4O43511 780 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 B4GALT3O60512 393 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 PPP6R2O75170 966 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 PDIA4P13667 645 aaKnown RBP7.56□□□□□ -1.2
PSMD4-210ENST00000470396 ARF4P18085 180 aaPredicted RBP7.56□□□□□ -1.2
PSMD4-210ENST00000470396 IBSPP21815 317 aaPredicted RBP7.56□□□□□ -1.2
PSMD4-210ENST00000470396 SFPQP23246 707 aaKnown RBP eCLIP7.56□□□□□ -1.2
PSMD4-210ENST00000470396 GUCY2CP25092 1073 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 UBA7P41226 1012 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 PHKA2P46019 1235 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 NPTX2P47972 431 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 AFF1P51825 1210 aaKnown RBP7.56□□□□□ -1.2
PSMD4-210ENST00000470396 ERVK-21P61565 698 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 BECN1Q14457 450 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 STK38Q15208 465 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 E2F4Q16254 413 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 LRRC55Q6ZSA7 311 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 CATSPER4Q7RTX7 472 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 CDR2LQ86X02 465 aaPredicted RBP7.56□□□□□ -1.2
PSMD4-210ENST00000470396 ECHDC2Q86YB7 292 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 MYLIPQ8WY64 445 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 RAD54LQ92698 747 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 CLP1Q92989 425 aaKnown RBP7.56□□□□□ -1.2
PSMD4-210ENST00000470396 LPPQ93052 612 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 CPB2Q96IY4 423 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 ZNF396Q96N95 335 aaPredicted RBP7.56□□□□□ -1.2
PSMD4-210ENST00000470396 FIZ1Q96SL8 496 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 YME1L1Q96TA2 773 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 REEP2Q9BRK0 252 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 ZBED2Q9BTP6 218 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 EIF2AQ9BY44 585 aaKnown RBP7.56□□□□□ -1.2
PSMD4-210ENST00000470396 NT5C3AQ9H0P0 336 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 FZD8Q9H461 694 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 SLC28A3Q9HAS3 691 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 CHST12Q9NRB3 414 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 C1orf112Q9NSG2 853 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 RCOR1Q9UKL0 485 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 PCDHA7Q9UN72 937 aa7.56□□□□□ -1.2
PSMD4-210ENST00000470396 MRPL42Q9Y6G3 142 aaKnown RBP7.56□□□□□ -1.2
PSMD4-210ENST00000470396 TRIOO75962 3097 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 MYMKA6NI61 221 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 INO80B-WBP1J3KQ70 363 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 SSBP05455 408 aaKnown RBP eCLIP7.55□□□□□ -1.2
PSMD4-210ENST00000470396 NAMPTP43490 491 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 ZNF131P52739 623 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 GIT2Q14161 759 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 TFDP1Q14186 410 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 DHX8Q14562 1220 aaKnown RBP7.55□□□□□ -1.2
PSMD4-210ENST00000470396 FAM187BQ17R55 369 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 LONRF3Q496Y0 759 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 PAN2Q504Q3 1202 aaKnown RBP7.55□□□□□ -1.2
PSMD4-210ENST00000470396 ODR4Q5SWX8 454 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 NT5DC1Q5TFE4 455 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 RESP18Q5W5W9 173 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 ATL3Q6DD88 541 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms