RNA–Protein interactions for RNA: ENST00000470386.5

GTF3C3-210, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-210ENST00000470386 KLHL3Q9UH77 587 aa4.61□□□□□ -1.67
GTF3C3-210ENST00000470386 TCFL5Q9UL49 500 aa4.61□□□□□ -1.67
GTF3C3-210ENST00000470386 TAF6LQ9Y6J9 622 aa4.61□□□□□ -1.67
GTF3C3-210ENST00000470386 GAKO14976 1311 aa4.61□□□□□ -1.67
GTF3C3-210ENST00000470386 MYH7P12883 1935 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 UNCXA6NJT0 531 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 GOLGA6L22H0YM25 854 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 K7ESM1 405 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 BUB1BO60566 1050 aaPredicted RBP4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 CTNND1O60716 968 aaKnown RBP4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 EFEMP2O95967 443 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 TFE3P19532 575 aaPredicted RBP4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 GNA15P30679 374 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 GBP1P32455 592 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 HMGCS2P54868 508 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 RHBDL3P58872 404 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 RTP1P59025 263 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 NUCB2P80303 420 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 SPP2Q13103 211 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 LAPTM5Q13571 262 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 TTF1Q15361 905 aaPredicted RBP4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 LRRFIP1Q32MZ4 808 aaKnown RBP4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 UBXN11Q5T124 520 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 GALNT18Q6P9A2 607 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 FBXO46Q6PJ61 603 aaPredicted RBP4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 OTOP1Q7RTM1 612 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 IGDCC3Q8IVU1 814 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 SMCR8Q8TEV9 937 aaPredicted RBP4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 ASB16Q96NS5 453 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 FEZ1Q99689 392 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 FSD1Q9BTV5 496 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 ARMT1Q9H993 441 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 PAG1Q9NWQ8 432 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 CNOT11Q9UKZ1 510 aaKnown RBP4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 FLT1P17948 1338 aa4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 PDS5AQ29RF7 1337 aaKnown RBP4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 RPAP1Q9BWH6 1393 aaPredicted RBP4.6□□□□□ -1.67
GTF3C3-210ENST00000470386 ZSWIM8A7E2V4 1837 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 NUDT19A8MXV4 375 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 PRKAB2O43741 272 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 TLR2O60603 784 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 CHGBP05060 677 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 APPP05067 770 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 PDE6AP16499 860 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 ZKSCAN1P17029 563 aaPredicted RBP4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 ATP5JP18859 108 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 HSPA4P34932 840 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 PSMC4P43686 418 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 RNF4P78317 190 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 RRP1BQ14684 758 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 ARHGEF6Q15052 776 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 PKN2Q16513 984 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 SHROOM1Q2M3G4 852 aaPredicted RBP4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 SLC9C1Q4G0N8 1177 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 TREML2Q5T2D2 321 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 WDR78Q5VTH9 848 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 CCDC171Q6TFL3 1326 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 CWC27Q6UX04 472 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 FASTKD5Q7L8L6 764 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 ANKRD23Q86SG2 305 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 CCAR1Q8IX12 1150 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 LCORLQ8N3X6 602 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 ANKRD13CQ8N6S4 541 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 ZNF655Q8N720 491 aaPredicted RBP4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 DAGLBQ8NCG7 672 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 RAET1EQ8TD07 263 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 SH3TC2Q8TF17 1288 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 SDR42E1Q8WUS8 393 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 TCTN2Q96GX1 697 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 PARK7Q99497 189 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 PLCD4Q9BRC7 762 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 HDAC8Q9BY41 377 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 CRNKL1Q9BZJ0 848 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.59□□□□□ -1.675e-6■■□□□ 11.5
GTF3C3-210ENST00000470386 DHX36Q9H2U1 1008 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 AS3MTQ9HBK9 375 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 ZNF532Q9HCE3 1301 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 MCM9Q9NXL9 1143 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 TMOD4Q9NZQ9 345 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 KLHL14Q9P2G3 628 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 PI4KBQ9UBF8 816 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 TNFRSF10DQ9UBN6 386 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 ZNF112Q9UJU3 913 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 GNEQ9Y223 722 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 PTPN22Q9Y2R2 807 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 PTCH2Q9Y6C5 1203 aa4.59□□□□□ -1.67
GTF3C3-210ENST00000470386 DOCK1Q14185 1865 aa4.58□□□□□ -1.68
GTF3C3-210ENST00000470386 MAST2Q6P0Q8 1798 aa4.58□□□□□ -1.68
GTF3C3-210ENST00000470386 MYPNQ86TC9 1320 aa4.58□□□□□ -1.68
GTF3C3-210ENST00000470386 CYP2D7A0A087X1C5 515 aa4.58□□□□□ -1.68
GTF3C3-210ENST00000470386 CXCL11O14625 94 aa4.58□□□□□ -1.68
GTF3C3-210ENST00000470386 TNPO2O14787 897 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-210ENST00000470386 PRICKLE3O43900 615 aaPredicted RBP4.58□□□□□ -1.68
GTF3C3-210ENST00000470386 MBD4O95243 580 aa4.58□□□□□ -1.68
GTF3C3-210ENST00000470386 GH2P01242 217 aa4.58□□□□□ -1.68
GTF3C3-210ENST00000470386 SYPP08247 313 aa4.58□□□□□ -1.68
GTF3C3-210ENST00000470386 CYP2D6P10635 497 aa4.58□□□□□ -1.68
GTF3C3-210ENST00000470386 PFKLP17858 780 aa4.58□□□□□ -1.68
GTF3C3-210ENST00000470386 PSMA5P28066 241 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms