RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 TCF25Q9BQ70 676 aa35■■■■□ 3.19
HMG20B-209ENST00000470356 ARID2Q68CP9 1835 aa34.99■■■■□ 3.19
HMG20B-209ENST00000470356 DCXO43602 365 aa34.99■■■■□ 3.19
HMG20B-209ENST00000470356 SLITRK3O94933 977 aa34.99■■■■□ 3.19
HMG20B-209ENST00000470356 RAB27AP51159 221 aa34.99■■■■□ 3.19
HMG20B-209ENST00000470356 CYP4A11Q02928 519 aa34.99■■■■□ 3.19
HMG20B-209ENST00000470356 XKR9Q5GH70 373 aa34.99■■■■□ 3.19
HMG20B-209ENST00000470356 PLPP4Q5VZY2 271 aa34.99■■■■□ 3.19
HMG20B-209ENST00000470356 SRGAP1Q7Z6B7 1085 aa34.99■■■■□ 3.19
HMG20B-209ENST00000470356 TPH2Q8IWU9 490 aa34.99■■■■□ 3.19
HMG20B-209ENST00000470356 SLC39A11Q8N1S5 342 aa34.99■■■■□ 3.19
HMG20B-209ENST00000470356 TCP11Q8WWU5 503 aa34.99■■■■□ 3.19
HMG20B-209ENST00000470356 ENTPD7Q9NQZ7 604 aa34.99■■■■□ 3.19
HMG20B-209ENST00000470356 FAM105AQ9NUU6 356 aa34.99■■■■□ 3.19
HMG20B-209ENST00000470356 SRGAP2CP0DJJ0 459 aa34.98■■■■□ 3.19
HMG20B-209ENST00000470356 ALDH7A1P49419 539 aaKnown RBP34.98■■■■□ 3.19
HMG20B-209ENST00000470356 LAMTOR4Q0VGL1 99 aa34.98■■■■□ 3.19
HMG20B-209ENST00000470356 CALCRLQ16602 461 aa34.98■■■■□ 3.19
HMG20B-209ENST00000470356 VN1R2Q8NFZ6 395 aa34.98■■■■□ 3.19
HMG20B-209ENST00000470356 HSD17B14Q9BPX1 270 aa34.98■■■■□ 3.19
HMG20B-209ENST00000470356 AGPAT5Q9NUQ2 364 aa34.98■■■■□ 3.19
HMG20B-209ENST00000470356 ZBTB39O15060 712 aa34.97■■■■□ 3.19
HMG20B-209ENST00000470356 ASAP2O43150 1006 aa34.97■■■■□ 3.19
HMG20B-209ENST00000470356 RBM10P98175 930 aaKnown RBP34.97■■■■□ 3.19
HMG20B-209ENST00000470356 EMC2Q15006 297 aa34.97■■■■□ 3.19
HMG20B-209ENST00000470356 TMEM184AQ6ZMB5 413 aa34.97■■■■□ 3.19
HMG20B-209ENST00000470356 LPPQ93052 612 aa34.97■■■■□ 3.19
HMG20B-209ENST00000470356 EIF2AK1Q9BQI3 630 aaKnown RBP34.97■■■■□ 3.19
HMG20B-209ENST00000470356 BCAR1P56945 870 aa34.96■■■■□ 3.19
HMG20B-209ENST00000470356 ST3GAL1Q11201 340 aa34.96■■■■□ 3.19
HMG20B-209ENST00000470356 KCNC3Q14003 757 aa34.96■■■■□ 3.19
HMG20B-209ENST00000470356 GLB1LQ6UWU2 654 aa34.96■■■■□ 3.19
HMG20B-209ENST00000470356 TMC7Q7Z402 723 aa34.96■■■■□ 3.19
HMG20B-209ENST00000470356 FERMT3Q86UX7 667 aa34.96■■■■□ 3.19
HMG20B-209ENST00000470356 TTC12Q9H892 705 aaPredicted RBP34.96■■■■□ 3.19
HMG20B-209ENST00000470356 HIDE1A8MVS5 230 aa34.95■■■■□ 3.19
HMG20B-209ENST00000470356 NEMFO60524 1076 aa34.95■■■■□ 3.19
HMG20B-209ENST00000470356 LYPLA2O95372 231 aa34.95■■■■□ 3.19
HMG20B-209ENST00000470356 FOSBP53539 338 aa34.95■■■■□ 3.19
HMG20B-209ENST00000470356 MINDY3Q9H8M7 445 aa34.95■■■■□ 3.19
HMG20B-209ENST00000470356 BMP2KQ9NSY1 1161 aaPredicted RBP34.95■■■■□ 3.19
HMG20B-209ENST00000470356 USP15Q9Y4E8 981 aaPredicted RBP34.95■■■■□ 3.19
HMG20B-209ENST00000470356 PRR33A8MZF0 331 aa34.94■■■■□ 3.18
HMG20B-209ENST00000470356 SRGAP2BP0DMP2 458 aa34.94■■■■□ 3.18
HMG20B-209ENST00000470356 LONRF3Q496Y0 759 aa34.94■■■■□ 3.18
HMG20B-209ENST00000470356 PGBD4Q96DM1 585 aa34.94■■■■□ 3.18
HMG20B-209ENST00000470356 MTMR9Q96QG7 549 aa34.94■■■■□ 3.18
HMG20B-209ENST00000470356 MTRQ99707 1265 aa34.94■■■■□ 3.18
HMG20B-209ENST00000470356 LIMCH1Q9UPQ0 1083 aa34.94■■■■□ 3.18
HMG20B-209ENST00000470356 PCDHB2Q9Y5E7 798 aa34.94■■■■□ 3.18
HMG20B-209ENST00000470356 CARNS1A5YM72 827 aa34.93■■■■□ 3.18
HMG20B-209ENST00000470356 MEIS3P2A8K0S8 358 aa34.93■■■■□ 3.18
HMG20B-209ENST00000470356 WNT7AO00755 349 aa34.93■■■■□ 3.18
HMG20B-209ENST00000470356 NOMO2Q5JPE7 1267 aa34.93■■■■□ 3.18
HMG20B-209ENST00000470356 RNF149Q8NC42 400 aa34.93■■■■□ 3.18
HMG20B-209ENST00000470356 ANKEF1Q9NU02 776 aa34.93■■■■□ 3.18
HMG20B-209ENST00000470356 TBC1D13Q9NVG8 400 aa34.93■■■■□ 3.18
HMG20B-209ENST00000470356 HCN4Q9Y3Q4 1203 aa34.93■■■■□ 3.18
HMG20B-209ENST00000470356 ARIH1Q9Y4X5 557 aaPredicted RBP34.93■■■■□ 3.18
HMG20B-209ENST00000470356 TRIOO75962 3097 aa34.92■■■■□ 3.18
HMG20B-209ENST00000470356 OFD1O75665 1012 aa34.92■■■■□ 3.18
HMG20B-209ENST00000470356 HOXA11P31270 313 aaPredicted RBP34.92■■■■□ 3.18
HMG20B-209ENST00000470356 TXKP42681 527 aa34.92■■■■□ 3.18
HMG20B-209ENST00000470356 SMC1AQ14683 1233 aaKnown RBP34.92■■■■□ 3.18
HMG20B-209ENST00000470356 MRPL10Q7Z7H8 261 aaKnown RBP34.92■■■■□ 3.18
HMG20B-209ENST00000470356 MRPL43Q8N983 215 aaKnown RBP34.92■■■■□ 3.18
HMG20B-209ENST00000470356 XPNPEP1Q9NQW7 623 aa34.92■■■■□ 3.18
HMG20B-209ENST00000470356 NT5C1B-RDH14C9J2C7 533 aa34.91■■■■□ 3.18
HMG20B-209ENST00000470356 ZC3H11AO75152 810 aaKnown RBP eCLIP34.91■■■■□ 3.18
HMG20B-209ENST00000470356 MXD4Q14582 209 aaPredicted RBP34.91■■■■□ 3.18
HMG20B-209ENST00000470356 RNF135Q8IUD6 432 aa34.91■■■■□ 3.18
HMG20B-209ENST00000470356 TMEM169Q96HH4 297 aa34.91■■■■□ 3.18
HMG20B-209ENST00000470356 SAFBQ15424 915 aaKnown RBP eCLIP34.9■■■■□ 3.18
HMG20B-209ENST00000470356 ANKRD54Q6NXT1 300 aa34.9■■■■□ 3.18
HMG20B-209ENST00000470356 SUSD6Q92537 303 aa34.9■■■■□ 3.18
HMG20B-209ENST00000470356 NRDE2Q9H7Z3 1164 aa34.9■■■■□ 3.18
HMG20B-209ENST00000470356 INPP5FQ9Y2H2 1132 aa34.9■■■■□ 3.18
HMG20B-209ENST00000470356 C2orf71A6NGG8 1288 aa34.89■■■■□ 3.18
HMG20B-209ENST00000470356 LOC730098B7Z3J9 87 aa34.89■■■■□ 3.18
HMG20B-209ENST00000470356 RNASELQ05823 741 aaKnown RBP34.89■■■■□ 3.18
HMG20B-209ENST00000470356 BMS1Q14692 1282 aaKnown RBP34.89■■■■□ 3.18
HMG20B-209ENST00000470356 PCBP1Q15365 356 aaKnown RBP eCLIP34.89■■■■□ 3.189e-6■■■□□ 18.2
HMG20B-209ENST00000470356 HERC4Q5GLZ8 1057 aaPredicted RBP34.89■■■■□ 3.18
HMG20B-209ENST00000470356 UBXN11Q5T124 520 aa34.89■■■■□ 3.18
HMG20B-209ENST00000470356 LLPHQ9BRT6 129 aaKnown RBP34.89■■■■□ 3.18
HMG20B-209ENST00000470356 PHF7Q9BWX1 381 aaPredicted RBP34.89■■■■□ 3.18
HMG20B-209ENST00000470356 DGAT1O75907 488 aa34.88■■■■□ 3.17
HMG20B-209ENST00000470356 TECP42680 631 aa34.88■■■■□ 3.17
HMG20B-209ENST00000470356 PTENP60484 403 aa34.88■■■■□ 3.17
HMG20B-209ENST00000470356 POU5F1BQ06416 359 aa34.88■■■■□ 3.17
HMG20B-209ENST00000470356 AGMOQ6ZNB7 445 aa34.88■■■■□ 3.17
HMG20B-209ENST00000470356 IGSF21Q96ID5 467 aa34.88■■■■□ 3.17
HMG20B-209ENST00000470356 S1PR5Q9H228 398 aa34.88■■■■□ 3.17
HMG20B-209ENST00000470356 MUC6Q6W4X9 2439 aa34.88■■■■□ 3.17
HMG20B-209ENST00000470356 GALTP07902 379 aa34.87■■■■□ 3.17
HMG20B-209ENST00000470356 XRCC6P12956 609 aaKnown RBP eCLIP34.87■■■■□ 3.17
HMG20B-209ENST00000470356 HOXB8P17481 243 aaPredicted RBP34.87■■■■□ 3.17
HMG20B-209ENST00000470356 GUCY1B3Q02153 619 aa34.87■■■■□ 3.17
HMG20B-209ENST00000470356 LLGL2Q6P1M3 1020 aa34.87■■■■□ 3.17
HMG20B-209ENST00000470356 SYCE2Q6PIF2 218 aa34.87■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms