RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 GJA10Q969M2 543 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 UIMC1Q96RL1 719 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 PBX4Q9BYU1 374 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 TMEM60Q9H2L4 133 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 IGFLR1Q9H665 355 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 SLC6A14Q9UN76 642 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 PFASO15067 1338 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 CYP3A7-CYP3A51PA0A087WV96 503 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 FAM229AH3BQW9 127 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 FIBPO43427 364 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 STRNO43815 780 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 CCNT1O60563 726 aaKnown RBP5.35□□□□□ -1.55
SF3B1-208ENST00000470268 ACPPP15309 386 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 ELNP15502 786 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 CDK11BP21127 795 aaKnown RBP5.35□□□□□ -1.55
SF3B1-208ENST00000470268 ITPKAP23677 461 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 CYP3A7P24462 503 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 EDNRBP24530 442 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 CIITAP33076 1130 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 PSMC4P43686 418 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 TRAPPC10P48553 1259 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 ALDH5A1P51649 535 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-208ENST00000470268 USP11P51784 963 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 SP3Q02447 781 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 MLLT1Q03111 559 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-208ENST00000470268 IL17AQ16552 155 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 ZNF792Q3KQV3 632 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 PPP4R3AQ6IN85 833 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 VSIG10LQ86VR7 867 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 ABRAQ8N0Z2 381 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 NSUN6Q8TEA1 469 aaKnown RBP5.35□□□□□ -1.55
SF3B1-208ENST00000470268 LEO1Q8WVC0 666 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-208ENST00000470268 LENG1Q96BZ8 264 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-208ENST00000470268 MBOAT7Q96N66 472 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 RTEL1Q9NZ71 1219 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 FLRT1Q9NZU1 646 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 FRRS1LQ9P0K9 344 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 GABRQQ9UN88 632 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 ATP6V1DQ9Y5K8 247 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 LCTP09848 1927 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 ZSWIM8A7E2V4 1837 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 SLC15A5A6NIM6 579 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 PDE2AO00408 941 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-208ENST00000470268 TNPO2O14787 897 aaKnown RBP5.34□□□□□ -1.55
SF3B1-208ENST00000470268 LILRB5O75023 590 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 ARP10275 920 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 MYCLP12524 364 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-208ENST00000470268 NCLP19338 710 aaKnown RBP5.34□□□□□ -1.55
SF3B1-208ENST00000470268 MARCKSP29966 332 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-208ENST00000470268 KRT85P78386 507 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 SLC39A14Q15043 492 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 CCL14Q16627 93 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 CEP55Q53EZ4 464 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 PRR16Q569H4 304 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 TMEM63BQ5T3F8 832 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 MEI1Q5TIA1 1274 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 ARHGEF16Q5VV41 709 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 PCNX4Q63HM2 1172 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 MCTP2Q6DN12 878 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 HFE2Q6ZVN8 426 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 FAM35AQ86V20 835 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 CCAR1Q8IX12 1150 aaKnown RBP5.34□□□□□ -1.55
SF3B1-208ENST00000470268 DNERQ8NFT8 737 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 CD99L2Q8TCZ2 262 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 ZNF296Q8WUU4 475 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-208ENST00000470268 TTC9Q92623 222 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 HAS1Q92839 578 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 MAML3Q96JK9 1138 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 MTMR9Q96QG7 549 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 KRTAP4-12Q9BQ66 201 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 WDR11Q9BZH6 1224 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 MAF1Q9H063 256 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 RASSF4Q9H2L5 321 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 BCAS3Q9H6U6 928 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 SAGE1Q9NXZ1 904 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 RCOR1Q9UKL0 485 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 NOL7Q9UMY1 257 aaKnown RBP5.34□□□□□ -1.55
SF3B1-208ENST00000470268 UBIAD1Q9Y5Z9 338 aa5.34□□□□□ -1.55
SF3B1-208ENST00000470268 MEIS1O00470 390 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 NEMFO60524 1076 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 ATP9AO75110 1047 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 SMNDC1O75940 238 aaKnown RBP eCLIP5.33□□□□□ -1.561e-11■■■■□ 23.3
SF3B1-208ENST00000470268 YEATS4O95619 227 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 SNAI1O95863 264 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 HOXC6P09630 235 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 CYP2B6P20813 491 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 PTGS1P23219 599 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 ERCC5P28715 1186 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 GRIA4P48058 902 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 FLT3LGP49771 235 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 FCGRTP55899 365 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 ATP2C1P98194 919 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 MAP2K1Q02750 393 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 PRKCZQ05513 592 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 TBC1D8BQ0IIM8 1120 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 MBTPS1Q14703 1052 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 GRIK4Q16099 956 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 AXDND1Q5T1B0 1012 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 ATL3Q6DD88 541 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 MOXD1Q6UVY6 613 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms