RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 KIF22Q14807 665 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 SLC15A2Q16348 729 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 FAM98CQ17RN3 349 aaKnown RBP11.12□□□□□ -0.63
SMC4-210ENST00000469762 BANK1Q8NDB2 785 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 P3H4Q92791 437 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 AAASQ9NRG9 546 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 PCYOX1Q9UHG3 505 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 SPATA31A6Q5VVP1 1343 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 EYA4O95677 639 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 SCP2P22307 547 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 FGFR4P22455 802 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 SREBF1P36956 1147 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 SETQ01105 290 aaPredicted RBP11.12□□□□□ -0.63
SMC4-210ENST00000469762 CCDC197Q8NCU1 140 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 CD101Q93033 1021 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 NAP1L4Q99733 375 aaKnown RBP11.12□□□□□ -0.63
SMC4-210ENST00000469762 DONSONQ9NYP3 566 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 ODF2LQ9ULJ1 636 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 DIS3Q9Y2L1 958 aaKnown RBP11.12□□□□□ -0.63
SMC4-210ENST00000469762 SMIM23A6NLE4 172 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 DLG4P78352 724 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 DHX34Q14147 1143 aaKnown RBP11.12□□□□□ -0.63
SMC4-210ENST00000469762 CNGA2Q16280 664 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 VPS36Q86VN1 386 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 CEP57Q86XR8 500 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 SCLT1Q96NL6 688 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 POP1Q99575 1024 aaKnown RBP11.12□□□□□ -0.63
SMC4-210ENST00000469762 TMEM109Q9BVC6 243 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 INTS2Q9H0H0 1204 aaKnown RBP11.12□□□□□ -0.63
SMC4-210ENST00000469762 NOD2Q9HC29 1040 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 USP40Q9NVE5 1235 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 DBR1Q9UK59 544 aaKnown RBP11.12□□□□□ -0.63
SMC4-210ENST00000469762 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.12□□□□□ -0.63
SMC4-210ENST00000469762 PCDHAC2Q9Y5I4 1007 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 MYH11P35749 1972 aa11.12□□□□□ -0.63
SMC4-210ENST00000469762 AFF2P51816 1311 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 TLDC2A0PJX2 215 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 ANKRD62A6NC57 917 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 RIPK2O43353 540 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 SLITRK3O94933 977 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 EEF2P13639 858 aaKnown RBP11.11□□□□□ -0.63
SMC4-210ENST00000469762 RPL13P26373 211 aaKnown RBP11.11□□□□□ -0.63
SMC4-210ENST00000469762 CIITAP33076 1130 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 ITIH4Q14624 930 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 EXOC3L1Q86VI1 746 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 TAX1BP1Q86VP1 789 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 CNBD1Q8NA66 436 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 ELAC2Q9BQ52 826 aaKnown RBP11.11□□□□□ -0.63
SMC4-210ENST00000469762 POLR3CQ9BUI4 534 aaPredicted RBP11.11□□□□□ -0.63
SMC4-210ENST00000469762 APEX2Q9UBZ4 518 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 CNOT7Q9UIV1 285 aaKnown RBP11.11□□□□□ -0.63
SMC4-210ENST00000469762 PHF2O75151 1096 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 PYGMP11217 842 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 PSMC2P35998 433 aaKnown RBP11.11□□□□□ -0.63
SMC4-210ENST00000469762 SLCO1A2P46721 670 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 CCDC38Q502W7 563 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 HIBCHQ6NVY1 386 aaPredicted RBP11.11□□□□□ -0.63
SMC4-210ENST00000469762 CDC42EP5Q6NZY7 148 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 CTNNBL1Q8WYA6 563 aaPredicted RBP11.11□□□□□ -0.63
SMC4-210ENST00000469762 N4BP2L2Q92802 583 aaPredicted RBP11.11□□□□□ -0.63
SMC4-210ENST00000469762 MKL1Q969V6 931 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 PCDHB18PQ96TA0 734 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 WDR18Q9BV38 432 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 STRA6Q9BX79 667 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 GOPCQ9HD26 462 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 SUFUQ9UMX1 484 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 EIF3DO15371 548 aaKnown RBP eCLIP11.11□□□□□ -0.632e-16■■■■■ 56.2
SMC4-210ENST00000469762 JAG1P78504 1218 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 AP3B2Q13367 1082 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 MKRN4PQ13434 485 aaPredicted RBP11.11□□□□□ -0.63
SMC4-210ENST00000469762 NBPF9Q3BBW0 867 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 GALNTL6Q49A17 601 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 C1orf220Q5T0J3 134 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 FAM182BQ5T319 152 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 APOBEC3HQ6NTF7 200 aaKnown RBP11.11□□□□□ -0.63
SMC4-210ENST00000469762 HOOK3Q86VS8 718 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 COL23A1Q86Y22 540 aaPredicted RBP11.11□□□□□ -0.63
SMC4-210ENST00000469762 ARHGEF19Q8IW93 802 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 SELENOSQ9BQE4 189 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 TACO1Q9BSH4 297 aaKnown RBP11.11□□□□□ -0.63
SMC4-210ENST00000469762 GGT7Q9UJ14 662 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 RABGAP1Q9Y3P9 1069 aa11.11□□□□□ -0.63
SMC4-210ENST00000469762 RARAP10276 462 aa11.1□□□□□ -0.63
SMC4-210ENST00000469762 HOXA13P31271 388 aaPredicted RBP11.1□□□□□ -0.63
SMC4-210ENST00000469762 CDR1P51861 262 aa11.1□□□□□ -0.63
SMC4-210ENST00000469762 KCNJ2P63252 427 aa11.1□□□□□ -0.63
SMC4-210ENST00000469762 TCEAL1Q15170 157 aa11.1□□□□□ -0.63
SMC4-210ENST00000469762 DENND2CQ68D51 928 aa11.1□□□□□ -0.63
SMC4-210ENST00000469762 ZNF720Q7Z2F6 126 aa11.1□□□□□ -0.63
SMC4-210ENST00000469762 ANKLE1Q8NAG6 615 aa11.1□□□□□ -0.63
SMC4-210ENST00000469762 ART4Q93070 314 aa11.1□□□□□ -0.63
SMC4-210ENST00000469762 MIEF2Q96C03 454 aa11.1□□□□□ -0.63
SMC4-210ENST00000469762 AGPAT3Q9NRZ7 376 aa11.1□□□□□ -0.63
SMC4-210ENST00000469762 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMC4-210ENST00000469762 MPHOSPH10O00566 681 aaKnown RBP11.1□□□□□ -0.63
SMC4-210ENST00000469762 CHRNB2P17787 502 aa11.1□□□□□ -0.63
SMC4-210ENST00000469762 MPP2Q14168 576 aa11.1□□□□□ -0.63
SMC4-210ENST00000469762 CYP1B1Q16678 543 aa11.1□□□□□ -0.63
SMC4-210ENST00000469762 ARHGAP44Q17R89 818 aa11.1□□□□□ -0.63
SMC4-210ENST00000469762 ZSWIM2Q8NEG5 633 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms