RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 THNSL2Q86YJ6 484 aa7.64□□□□□ -1.19
PTCD3-208ENST00000469585 ITPRIPQ8IWB1 547 aa7.64□□□□□ -1.19
PTCD3-208ENST00000469585 SYNE4Q8N205 404 aa7.64□□□□□ -1.19
PTCD3-208ENST00000469585 NETO2Q8NC67 525 aa7.64□□□□□ -1.19
PTCD3-208ENST00000469585 ZNF526Q8TF50 670 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-208ENST00000469585 DDX1Q92499 740 aaKnown RBP7.64□□□□□ -1.19
PTCD3-208ENST00000469585 FBXW5Q969U6 566 aa7.64□□□□□ -1.19
PTCD3-208ENST00000469585 CELF4Q9BZC1 486 aaKnown RBP7.64□□□□□ -1.19
PTCD3-208ENST00000469585 SLC6A17Q9H1V8 727 aa7.64□□□□□ -1.19
PTCD3-208ENST00000469585 TMX1Q9H3N1 280 aa7.64□□□□□ -1.19
PTCD3-208ENST00000469585 CNNM1Q9NRU3 951 aa7.64□□□□□ -1.19
PTCD3-208ENST00000469585 COA3Q9Y2R0 106 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-208ENST00000469585 XDHP47989 1333 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 GSG1L2A8MUP6 293 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 B4E1Z4 1266 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 UFL1O94874 794 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 CYBBP04839 570 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 IGKV5-2P06315 115 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 PYGMP11217 842 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 MYCLP1P12525 358 aaPredicted RBP7.63□□□□□ -1.19
PTCD3-208ENST00000469585 SDHBP21912 280 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 IRAK1P51617 712 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 TNIP1Q15025 636 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 CNNM4Q6P4Q7 775 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 CABP7Q86V35 215 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.63□□□□□ -1.19
PTCD3-208ENST00000469585 KCNJ15Q99712 375 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 PLA2G12BQ9BX93 195 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 RCAN3Q9UKA8 241 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 COQ6Q9Y2Z9 468 aa7.63□□□□□ -1.19
PTCD3-208ENST00000469585 CACNA1SQ13698 1873 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 ANKRD31Q8N7Z5 1873 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 ZNF503-AS2A6NEH8 195 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 FRAT2O75474 233 aaPredicted RBP7.62□□□□□ -1.19
PTCD3-208ENST00000469585 DGKIO75912 1065 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 NPTXRO95502 500 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 APPP05067 770 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 VIL1P09327 827 aaKnown RBP7.62□□□□□ -1.19
PTCD3-208ENST00000469585 JMJD7P0C870 316 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 SLC6A11P48066 632 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 ADGRF1Q5T601 910 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 PAQR3Q6TCH7 311 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 LMBR1LQ6UX01 489 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 LDHAL6AQ6ZMR3 332 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 OTOP3Q7RTS5 596 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 IRF2BP1Q8IU81 584 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 IGSF22Q8N9C0 903 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 TTLL11Q8NHH1 800 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 FAM168AQ92567 244 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 ZNF277Q9NRM2 450 aaPredicted RBP7.62□□□□□ -1.19
PTCD3-208ENST00000469585 SAMD15Q9P1V8 674 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 CBLCQ9ULV8 474 aa7.62□□□□□ -1.19
PTCD3-208ENST00000469585 LAMB2P55268 1798 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 RTL9Q8NET4 1388 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 CCDC66A2RUB6 948 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 GLRX3O76003 335 aaKnown RBP7.61□□□□□ -1.19
PTCD3-208ENST00000469585 GNAI2P04899 355 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 MPOP05164 745 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 STAT3P40763 770 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 OS9Q13438 667 aaPredicted RBP7.61□□□□□ -1.19
PTCD3-208ENST00000469585 NR1I3Q14994 352 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 FAM47CQ5HY64 1035 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 EMC4Q5J8M3 183 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 RNF187Q5TA31 235 aaPredicted RBP7.61□□□□□ -1.19
PTCD3-208ENST00000469585 CDCA2Q69YH5 1023 aaPredicted RBP7.61□□□□□ -1.19
PTCD3-208ENST00000469585 RPTNQ6XPR3 784 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 OVCH1Q7RTY7 1134 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 DCP2Q8IU60 420 aaKnown RBP7.61□□□□□ -1.19
PTCD3-208ENST00000469585 ORAI3Q9BRQ5 295 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 GREM2Q9H772 168 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 SPC25Q9HBM1 224 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 RXFP1Q9HBX9 757 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 SLC6A20Q9NP91 592 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 KLHL14Q9P2G3 628 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 SIT1Q9Y3P8 196 aa7.61□□□□□ -1.19
PTCD3-208ENST00000469585 BRCA1P38398 1863 aaKnown RBP7.61□□□□□ -1.19
PTCD3-208ENST00000469585 COL11A2P13942 1736 aaPredicted RBP7.61□□□□□ -1.19
PTCD3-208ENST00000469585 MYH3P11055 1940 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 SRCAPQ6ZRS2 3230 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 MROH5Q6ZUA9 1318 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 ZC3H12DA2A288 527 aaKnown RBP7.6□□□□□ -1.19
PTCD3-208ENST00000469585 ANKRD62A6NC57 917 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 GLTPD2A6NH11 291 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 GSTA4O15217 222 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 NKRFO15226 690 aaKnown RBP eCLIP7.6□□□□□ -1.19
PTCD3-208ENST00000469585 SGSM2O43147 1006 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 DNAJC6O75061 913 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 HMMRO75330 724 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 TADA3O75528 432 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 BCAR3O75815 825 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 GNAT1P11488 350 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 COL6A2P12110 1019 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 VEGFAP15692 232 aaPredicted RBP7.6□□□□□ -1.19
PTCD3-208ENST00000469585 FLT3P36888 993 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 YBX1P67809 324 aaKnown RBP7.6□□□□□ -1.19
PTCD3-208ENST00000469585 LACTBP83111 547 aaPredicted RBP7.6□□□□□ -1.19
PTCD3-208ENST00000469585 SPIRE1Q08AE8 756 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 PCBP1Q15365 356 aaKnown RBP eCLIP7.6□□□□□ -1.19
PTCD3-208ENST00000469585 CAVIN4Q5BKX8 364 aa7.6□□□□□ -1.19
PTCD3-208ENST00000469585 METTL24Q5JXM2 366 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms